SRR1528057_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1528057_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1378719
Sequences flagged as poor quality	0
Sequence length	59
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTCACGTTGGGGGATGCTGAAACTGAAACTCCAGTACTTTGGCCACCTGATGCAAAGA	3173	0.23014116727193865	No Hit
GACCACGTTGGGGAGGTACTGGAGGGAGAGACGTGGGCACAAAGGTCGCGGGAGGAACA	1922	0.1394047663084356	No Hit
TACCACGTTGGGGGGAATTGTGAAGTGATGAGCTAAACTGGGTGAGTTGGAGATTCTAA	1393	0.10103581658046346	No Hit
GGCGACGTTGGGGTTAAGTACAACTACGACTGCCCCCTTGAGACAAGGCCTGAGCTCTG	1389	0.10074569219688712	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATGTA	110	0.0	53.000004	29
TTAGGAT	55	0.0	53.000004	45
CTGGTCA	55	0.0	53.000004	38
TCACTCC	110	0.0	53.000004	22
TTACACC	55	0.0	53.000004	31
CCTGAGC	155	0.0	53.000004	49
TACACCT	55	0.0	53.000004	32
TTCCTTA	55	0.0	53.000004	27
CTTACAC	55	0.0	53.000004	30
ACAACTG	80	0.0	53.0	25
GTGCATT	40	1.6007107E-9	53.0	23
GTCATGT	40	1.6007107E-9	53.0	25
CATGGCT	50	3.6379788E-12	53.0	40
TTAGGCT	50	3.6379788E-12	53.0	28
CTGTCTG	40	1.6007107E-9	53.0	23
GATACTC	50	3.6379788E-12	53.0	16
ACTATAC	95	0.0	53.0	45
TCTGACC	40	1.6007107E-9	53.0	52
TACCCGT	40	1.6007107E-9	53.0	39
GATGTTT	20	3.1384645E-4	53.0	32