##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528052_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 16313084 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.506745076528755 31.0 31.0 34.0 30.0 34.0 2 31.987806781354156 31.0 31.0 34.0 30.0 34.0 3 32.1449776755885 33.0 31.0 34.0 30.0 34.0 4 35.81781280596606 37.0 35.0 37.0 35.0 37.0 5 35.85365612044908 37.0 35.0 37.0 35.0 37.0 6 35.863243516676555 37.0 35.0 37.0 35.0 37.0 7 35.86685154076323 37.0 35.0 37.0 35.0 37.0 8 35.836556042989784 37.0 35.0 37.0 33.0 37.0 9 36.988047569668616 39.0 37.0 39.0 33.0 39.0 10 37.48029128029991 39.0 37.0 39.0 35.0 39.0 11 37.652302532126974 39.0 37.0 39.0 35.0 39.0 12 37.518801778989186 39.0 37.0 39.0 35.0 39.0 13 37.45280395785371 39.0 37.0 39.0 35.0 39.0 14 38.05386063113511 40.0 38.0 40.0 33.0 40.0 15 37.374107311652416 39.0 37.0 40.0 32.0 40.0 16 36.94615267107066 39.0 36.0 40.0 32.0 40.0 17 36.80204245867918 39.0 36.0 40.0 31.0 40.0 18 36.85922275640829 39.0 36.0 40.0 31.0 40.0 19 37.0283427707477 39.0 36.0 40.0 32.0 40.0 20 37.141910199199614 39.0 36.0 40.0 32.0 40.0 21 37.030060778207236 39.0 36.0 40.0 32.0 40.0 22 37.0967055646866 39.0 36.0 40.0 32.0 40.0 23 37.20546347949903 39.0 36.0 40.0 32.0 40.0 24 37.184316466463365 39.0 36.0 40.0 32.0 40.0 25 37.182148452125915 39.0 36.0 40.0 32.0 40.0 26 36.93892644701639 39.0 35.0 40.0 31.0 40.0 27 36.783286777656514 39.0 35.0 40.0 31.0 40.0 28 36.80131580270169 39.0 35.0 40.0 31.0 40.0 29 36.87087965708998 39.0 35.0 40.0 31.0 40.0 30 36.74254929356092 39.0 35.0 40.0 31.0 40.0 31 36.78231068999583 39.0 35.0 40.0 31.0 40.0 32 36.82998236262377 39.0 35.0 40.0 31.0 40.0 33 36.84680793650054 39.0 35.0 40.0 31.0 40.0 34 36.796727890324114 39.0 35.0 40.0 31.0 40.0 35 36.58513289087459 39.0 35.0 40.0 31.0 40.0 36 36.62126830218002 39.0 35.0 40.0 31.0 40.0 37 36.51096279526299 39.0 35.0 40.0 31.0 40.0 38 36.34843975547481 38.0 35.0 40.0 31.0 40.0 39 36.23137268219792 38.0 35.0 40.0 30.0 40.0 40 36.16153573413831 38.0 35.0 40.0 30.0 40.0 41 36.04845141482751 38.0 35.0 40.0 30.0 40.0 42 35.94464756020382 38.0 35.0 40.0 30.0 40.0 43 35.80007808456084 38.0 35.0 40.0 30.0 40.0 44 35.51011372221218 37.0 34.0 40.0 29.0 40.0 45 35.39009037163053 37.0 34.0 40.0 29.0 40.0 46 35.28143826145933 37.0 34.0 40.0 29.0 40.0 47 35.173762974554656 37.0 34.0 40.0 29.0 40.0 48 35.05280184911694 36.0 34.0 40.0 29.0 40.0 49 34.792096761102925 36.0 34.0 39.0 28.0 40.0 50 34.694772367996144 36.0 33.0 39.0 28.0 40.0 51 34.539740186466275 35.0 33.0 39.0 27.0 40.0 52 33.161290470888275 35.0 32.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 5.0 13 10.0 14 29.0 15 89.0 16 237.0 17 727.0 18 1997.0 19 4449.0 20 8543.0 21 15338.0 22 25090.0 23 39651.0 24 59618.0 25 85608.0 26 118508.0 27 161598.0 28 215573.0 29 281627.0 30 363574.0 31 458247.0 32 572340.0 33 734742.0 34 1060821.0 35 1627619.0 36 1630817.0 37 2723313.0 38 4847251.0 39 1275663.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.237141916267948 20.175896844520633 34.83958643258381 18.74737480662761 2 22.46721098230108 22.499234356912527 36.183709959441146 18.84984470134525 3 24.120497387250627 21.286054801164514 36.440270889305786 18.153176922279073 4 25.987556981868053 21.82563395125042 38.356438304369675 13.83037076251186 5 0.0 0.0 0.0 100.0 6 0.0 100.0 0.0 0.0 7 0.0 0.0 100.0 0.0 8 100.0 0.0 0.0 0.0 9 0.0 100.0 0.0 0.0 10 0.0 0.0 100.0 0.0 11 99.58536350330814 0.3199395037750066 0.04320458351100258 0.051492409405848705 12 99.63975542576745 0.2502592397611635 0.08068983154871268 0.029295502922684638 13 98.8005701435731 0.6211700987992216 0.2011452892659659 0.377114468361715 14 65.71361368579969 22.199953117387246 4.203074047801139 7.8833591490119215 15 35.53207351841013 26.237417768461192 16.196808647586195 22.03370006554248 16 30.60624220411052 17.355032316390943 26.05230868669591 25.986416792802636 17 24.97915170423937 17.178444002372576 29.20480272154548 28.637601571842573 18 25.327031970165788 16.960336868246372 31.34182966261928 26.37080149896856 19 26.237552629533447 17.44807419614832 28.096244707622418 28.218128466695813 20 29.673230395920232 17.16848267317204 24.402222167188008 28.756064763719724 21 31.10009119060504 18.444746560490955 21.240189776500877 29.214972472403133 22 29.91281109077842 20.564505154267582 21.43683560999257 28.085848144961428 23 29.579679722117536 20.72439521552148 20.32990205898529 29.366023003375695 24 29.616153512113346 22.875827771131444 20.71875557068179 26.789263146073424 25 32.12689887454757 19.829475530194046 22.29473593098644 25.74888966427194 26 31.0528346448777 18.77088354354088 22.501042721290467 27.675239090290958 27 31.71891961078604 20.141231418902766 21.110110142263718 27.029738828047474 28 30.721137707621686 19.5505215322866 21.107137068625406 28.621203691466313 29 29.335660871972465 19.58323760240553 21.558946180869295 29.522155344752715 30 28.868115924616095 20.3730759922526 21.672560504194056 29.086247578937254 31 29.010688598182906 19.514568796433586 21.17172939218605 30.303013213197456 32 29.672985193970682 21.419886025229808 20.22222162283968 28.68490715795983 33 30.11398090023934 22.025271248526643 20.131049407947632 27.72969844328638 34 29.093989830494344 21.927368240119407 21.7664973710673 27.212144558318958 35 31.580582800897734 22.346798434925 19.110978647569034 26.961640116608237 36 34.67766119514863 21.487776315011924 19.503620529386104 24.33094196045334 37 33.628552393894374 21.249409369804017 20.448389771057393 24.673648465244217 38 30.568033610321628 22.987750201004296 23.673359372145697 22.770856816528376 39 30.130299089982003 24.84802383166788 23.10609079190667 21.915586286443446 40 31.017874976920368 25.059823145641868 19.32774330102144 24.59455857641633 41 30.469394996065734 25.502492355216216 18.923166214309937 25.10494643440811 42 32.6087390955628 23.861484437890468 17.92142429966032 25.608352166886412 43 32.492108788258555 22.39456377469766 18.44982224084667 26.663505196197114 44 30.0475556921058 22.424251600739627 19.596024884074648 27.93216782307993 45 27.54772794647536 22.682467643763744 20.911839845856246 28.857964563904652 46 27.552932357854594 19.77427444130123 22.77394023104399 29.898852969800195 47 26.91674976969407 18.41595985161359 24.600982867494583 30.06630751119776 48 27.54054965940223 18.797169192532817 23.376756963919266 30.285524184145686 49 28.51668636046992 19.51831425621299 23.086529806381183 28.87846957693591 50 27.0667214120886 22.19547818180793 22.359119832889967 28.3786805732135 51 27.906672950375295 21.781571160915984 22.398701557596347 27.913054331112374 52 28.824892950958876 20.895822028501783 23.67409497799435 26.60519004254499 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 1.0 4 2.0 5 5.0 6 8.0 7 11.5 8 15.0 9 541.5 10 1068.0 11 1819.5 12 2571.0 13 4777.5 14 9530.0 15 12076.0 16 12346.5 17 12617.0 18 12679.0 19 12741.0 20 15026.5 21 17312.0 22 23347.5 23 29383.0 24 36544.5 25 43706.0 26 54569.0 27 65432.0 28 69730.0 29 74028.0 30 75064.0 31 76100.0 32 91845.0 33 107590.0 34 115697.5 35 123805.0 36 144286.0 37 164767.0 38 182782.5 39 229389.0 40 257980.0 41 280898.5 42 303817.0 43 363641.5 44 423466.0 45 448914.0 46 474362.0 47 543607.5 48 612853.0 49 676676.5 50 740500.0 51 818420.0 52 896340.0 53 1053011.5 54 1209683.0 55 1403512.5 56 1597342.0 57 1755155.0 58 1912968.0 59 1890262.0 60 1867556.0 61 1714740.5 62 1561925.0 63 1371806.5 64 995332.0 65 808976.0 66 690852.5 67 572729.0 68 491106.5 69 409484.0 70 337140.0 71 264796.0 72 213440.0 73 162084.0 74 113861.5 75 65639.0 76 42934.0 77 20229.0 78 17215.5 79 14202.0 80 8503.0 81 2804.0 82 1587.5 83 371.0 84 284.0 85 197.0 86 136.5 87 76.0 88 45.0 89 7.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1.6313084E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 4.892718663758807 #Duplication Level Percentage of deduplicated Percentage of total 1 74.75706386257175 3.6576528160821393 2 8.74561385632973 0.8557965628178421 3 3.7117765714169866 0.544820355200237 4 2.29013400866998 0.4481992562691354 5 1.6383246834548935 0.4007930878018248 6 1.1847816718659143 0.34780820390506334 7 0.9063126813118012 0.31040330797388765 8 0.6792722491361463 0.2658790408897477 9 0.4951142420553739 0.21802092235174114 >10 2.4679058436244223 2.1576191328575693 >50 0.29856567038744053 1.0452447142558599 >100 1.2586885615751144 18.589077221150045 >500 1.0932312776532171 38.07237755840322 >1k 0.4728257696706555 32.97071378718504 >5k 3.890502767449167E-4 0.11559403285668014 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.00709246639078178 0.0 0.0 0.0 0.0 12 0.012542079719567435 0.0 0.0 0.0 0.0 13 0.019591635769177673 0.0 0.0 0.0 0.0 14 0.047244285629866184 0.0 0.0 0.0 0.0 15 0.06538922989668906 0.0 0.0 0.0 0.0 16 0.07818877166328574 0.0 0.0 0.0 0.0 17 0.08689344087236969 0.0 0.0 0.0 0.0 18 0.09749842519047901 0.0 0.0 0.0 0.0 19 0.1073248933187618 0.0 0.0 0.0 0.0 20 0.11855514260822785 0.0 0.0 0.0 0.0 21 0.13041678691778943 0.0 0.0 0.0 0.0 22 0.14270140459032762 0.0 0.0 0.0 0.0 23 0.15525574440737264 0.0 0.0 0.0 0.0 24 0.1676323128109927 0.0 0.0 0.0 0.0 25 0.18151687320435547 0.0 0.0 0.0 0.0 26 0.1956466355472699 0.0 0.0 0.0 0.0 27 0.20949441564819993 0.0 0.0 0.0 0.0 28 0.22328089526174205 0.0 0.0 0.0 0.0 29 0.24081283465468578 0.0 0.0 0.0 0.0 30 0.2618695520724346 0.0 0.0 0.0 0.0 31 0.2788375269814095 0.0 0.0 0.0 0.0 32 0.2943404202418133 0.0 0.0 0.0 0.0 33 0.30663729801182904 0.0 0.0 0.0 0.0 34 0.3191732476826577 0.0 0.0 0.0 0.0 35 0.3322363815450224 0.0 0.0 0.0 0.0 36 0.34534242574855867 0.0 0.0 0.0 0.0 37 0.3565726750380247 0.0 0.0 0.0 0.0 38 0.3692741360248007 0.0 0.0 0.0 0.0 39 0.3832077368080738 0.0 0.0 0.0 0.0 40 0.40021249200948145 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTAA 45 3.110472E-10 46.0 45 CGCATGA 83900 0.0 45.194042 3 TTCATGA 244905 0.0 45.08058 3 TACGCAT 6705 0.0 45.039524 1 ATGGGGC 251940 0.0 45.01131 9 TCATGAT 640435 0.0 44.958515 4 TGATGGG 1640615 0.0 44.91828 7 CATGATG 1663610 0.0 44.914845 5 ATGATGG 1659900 0.0 44.87958 6 GATGGGG 1085075 0.0 44.86534 8 CACATGA 79585 0.0 44.84111 3 ATGGGAG 157310 0.0 44.808407 9 TTTCATG 93850 0.0 44.769737 2 TTCGCAT 10355 0.0 44.733944 1 GTCATGA 144370 0.0 44.71116 3 TACATGA 134255 0.0 44.69971 3 ACATGAT 366045 0.0 44.6874 4 ATGGGGA 314930 0.0 44.664974 9 GCATGAT 437205 0.0 44.6217 4 ATGGGAC 69675 0.0 44.56405 9 >>END_MODULE