##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528051_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 14671238 Sequences flagged as poor quality 0 Sequence length 59 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.951905353863115 31.0 31.0 33.0 30.0 34.0 2 31.507087268300058 31.0 31.0 34.0 30.0 34.0 3 31.754681983892567 31.0 31.0 34.0 30.0 34.0 4 35.52077036716329 37.0 35.0 37.0 33.0 37.0 5 35.4202962967406 37.0 35.0 37.0 33.0 37.0 6 35.52688007651433 37.0 35.0 37.0 33.0 37.0 7 35.47804868273557 37.0 35.0 37.0 33.0 37.0 8 35.39039513911505 37.0 35.0 37.0 33.0 37.0 9 36.41731004568258 38.0 35.0 39.0 32.0 39.0 10 37.06046674452422 39.0 37.0 39.0 33.0 39.0 11 37.056197984110135 39.0 37.0 39.0 34.0 39.0 12 36.990126668247086 39.0 37.0 39.0 34.0 39.0 13 36.988376713676104 39.0 37.0 39.0 33.0 39.0 14 37.38247563020926 40.0 37.0 40.0 32.0 40.0 15 36.60639204407972 39.0 36.0 40.0 31.0 40.0 16 35.998764794082135 38.0 35.0 40.0 30.0 40.0 17 36.07000854324632 38.0 35.0 40.0 30.0 40.0 18 36.23620692405099 38.0 35.0 40.0 30.0 40.0 19 36.442793580200934 39.0 35.0 40.0 30.0 40.0 20 36.45918551658694 39.0 35.0 40.0 30.0 40.0 21 36.299302621905525 39.0 35.0 40.0 30.0 40.0 22 36.31646606782604 39.0 35.0 40.0 30.0 40.0 23 36.33676810368696 39.0 35.0 40.0 30.0 40.0 24 36.30921187428082 38.0 35.0 40.0 30.0 40.0 25 36.30962295070123 38.0 35.0 40.0 30.0 40.0 26 35.996822831174846 38.0 35.0 40.0 30.0 40.0 27 35.84651233931315 38.0 35.0 40.0 29.0 40.0 28 35.823562128840116 38.0 35.0 40.0 29.0 40.0 29 35.7951870183007 38.0 35.0 40.0 29.0 40.0 30 35.699148360894974 38.0 34.0 40.0 29.0 40.0 31 35.70269107487725 38.0 34.0 40.0 29.0 40.0 32 35.67496982872202 38.0 34.0 40.0 29.0 40.0 33 35.46118173531095 38.0 34.0 40.0 28.0 40.0 34 35.3469347303888 38.0 34.0 40.0 27.0 40.0 35 35.24813332044644 38.0 34.0 40.0 27.0 40.0 36 35.106897659215946 38.0 34.0 40.0 26.0 40.0 37 35.07298177563475 38.0 33.0 40.0 27.0 40.0 38 34.94611838482887 38.0 33.0 40.0 26.0 40.0 39 34.73997838491885 37.0 33.0 40.0 26.0 40.0 40 34.74105157315286 37.0 33.0 40.0 26.0 40.0 41 34.58500680038045 37.0 33.0 40.0 26.0 40.0 42 34.5923172945596 37.0 33.0 40.0 26.0 40.0 43 34.44170955443569 37.0 33.0 40.0 26.0 40.0 44 34.25185236583307 36.0 33.0 39.0 25.0 40.0 45 34.149966076482436 36.0 33.0 39.0 25.0 40.0 46 34.0388820629861 36.0 33.0 39.0 25.0 40.0 47 33.7670805967431 35.0 32.0 39.0 24.0 40.0 48 33.63930603538706 35.0 32.0 39.0 24.0 40.0 49 33.45375863986393 35.0 32.0 39.0 23.0 40.0 50 33.168628850544174 35.0 32.0 38.0 23.0 40.0 51 32.99795375141484 35.0 31.0 38.0 23.0 40.0 52 32.39975494910518 35.0 31.0 38.0 20.0 40.0 53 32.41459139303718 35.0 31.0 38.0 21.0 40.0 54 32.43592578894842 35.0 31.0 37.0 22.0 40.0 55 32.45005881575911 35.0 31.0 37.0 23.0 39.0 56 32.30470584690944 34.0 31.0 37.0 22.0 39.0 57 32.05763678566185 34.0 31.0 37.0 22.0 39.0 58 31.883736532663434 34.0 30.0 36.0 22.0 39.0 59 31.08346241809996 34.0 29.0 36.0 20.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 10.0 13 23.0 14 86.0 15 373.0 16 1448.0 17 3778.0 18 8510.0 19 16830.0 20 28273.0 21 44288.0 22 64482.0 23 91275.0 24 123314.0 25 163400.0 26 210015.0 27 267030.0 28 331756.0 29 402858.0 30 491010.0 31 606431.0 32 753109.0 33 954053.0 34 1300551.0 35 1602886.0 36 1874276.0 37 2475504.0 38 2603796.0 39 251872.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.348335430179787 20.609739955142164 33.992850501096086 19.049074113581963 2 22.083303399481352 23.14231423414984 35.857771511851965 18.916610854516843 3 24.007483213073087 21.598293204704333 36.226322550285126 18.167901031937454 4 26.208333611655675 22.0954836940141 37.866477252976196 13.82970544135403 5 0.0 0.0 0.0 100.0 6 0.0 100.0 0.0 0.0 7 0.0 0.0 100.0 0.0 8 100.0 0.0 0.0 0.0 9 0.0 100.0 0.0 0.0 10 0.0 0.0 100.0 0.0 11 99.54266981423108 0.3537533778676346 0.046526407655577535 0.057050400245705235 12 99.58801704396043 0.2852997136301654 0.08576644997511457 0.040916792434285365 13 98.74315309996334 0.6527942631698839 0.21527154013860317 0.38878109672816974 14 65.32427597452921 22.406445863668765 4.362856086173505 7.9064220756285195 15 35.74495213014743 26.27065282425382 16.253236434444045 21.731158611154697 16 30.893193880434627 17.36562381443202 25.886254452419077 25.854927852714273 17 24.995068582487722 17.258795747161894 29.098007952703103 28.648127717647277 18 25.117362283946314 17.130060871482012 31.29606376776111 26.456513076810563 19 26.325924233524123 17.61271952646396 28.064291506960764 27.997064733051158 20 29.726271225373075 17.27785344358806 24.529054739620474 28.46682059141839 21 31.108295019138808 18.5725908065836 21.42385666431149 28.8952575099661 22 29.94605499549527 20.66554983294525 21.48374254442604 27.90465262713344 23 29.48212686618539 21.046478831575087 20.3556509682414 29.11574333399813 24 29.535632916595038 23.10005467841228 20.80226631181363 26.56204609317905 25 32.038932229168395 20.13795972773395 22.28948913513638 25.533618907961277 26 30.878457564385503 18.921095820270928 22.799964120273966 27.400482495069607 27 31.799954441472494 20.16234758102895 21.322863142156102 26.714834835342455 28 30.800291018385767 19.60322639439153 21.189541059861476 28.406941527361223 29 29.286921798964748 19.678843734932254 21.5485496179668 29.485684848136195 30 28.748078383023984 20.469765400847564 21.77253889549062 29.009617320637837 31 28.731706213204365 19.72060571848129 21.256106676205512 30.291581392108828 32 29.479107352767368 21.79407763680202 20.187757842930502 28.539057167500108 33 30.046373727970334 22.275911548841346 20.213645228848446 27.464069494339878 34 29.014886132990274 22.08795876666986 21.968623234112894 26.92853186622697 35 31.75112420642348 22.449352944857143 19.035660112663976 26.763862736055405 36 34.66688359905278 21.5980955390404 19.69837855537481 24.036642306532006 37 33.652736054039885 21.387002242073912 20.49408509356879 24.46617661031741 38 30.46243268632136 23.15708463048585 23.782860042213205 22.59762264097958 39 29.814770914356377 25.191854975019833 23.224611310920046 21.768762799703747 40 30.83475300448401 25.472881020674603 19.300484389933555 24.391881584907832 41 30.34782068152667 25.813063628304576 18.94444081678724 24.894674873381508 42 32.472535719207876 24.243741393875553 17.894965646389213 25.388757240527347 43 32.36034341478204 22.627626925553248 18.516910433870677 26.495119225794035 44 29.97937188395417 22.604370537782835 19.52554378846557 27.890713789797427 45 27.376885304430342 23.01702146744535 20.83040981272337 28.775683415400938 46 27.323665528430524 20.051900187291626 22.6795312024793 29.94490308179855 47 26.710636143998208 18.601184167280223 24.526900865489335 30.16127882323223 48 27.37270706125822 18.94341159212331 23.287250878214913 30.39663046840355 49 28.47007185078723 19.712419633571482 22.969465835125842 28.84804268051544 50 26.782647790186488 22.51618438743888 22.47502221693902 28.226145605435615 51 27.62653703797866 21.923105602949118 22.556651320086278 27.89370603898594 52 28.60779029009004 21.116527453238778 23.871141617360443 26.404540639310735 53 28.21233627318976 22.08291488421086 22.41427069753759 27.290478145061787 54 26.204080391852415 22.475288043176725 23.15477398703504 28.16585757793582 55 26.99961652861197 21.598927098040395 22.790074021019905 28.61138235232773 56 27.387743283831945 21.163817259320584 22.928228687994835 28.520210768852632 57 26.642639155605004 21.49669305344239 24.578396178972763 27.282271611979848 58 27.014652751185686 19.764242117809008 24.544309076030256 28.676796054975046 59 25.979723047230234 20.03149291150481 23.86938307455717 30.119400966707786 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.5 4 2.0 5 3.0 6 7.0 7 11.0 8 420.0 9 1342.5 10 1856.0 11 3605.5 12 5355.0 13 6806.5 14 8268.0 15 8278.0 16 8049.0 17 7820.0 18 7956.0 19 8428.0 20 8764.0 21 11209.0 22 13654.0 23 19288.5 24 24923.0 25 28405.0 26 41082.5 27 50278.0 28 55699.0 29 61120.0 30 67357.5 31 80715.5 32 87836.0 33 102251.0 34 116666.0 35 129322.0 36 143724.5 37 145471.0 38 164239.5 39 183008.0 40 202551.5 41 222095.0 42 253130.0 43 297737.0 44 311309.0 45 344012.5 46 376716.0 47 395428.5 48 466892.5 49 519644.0 50 587971.5 51 656299.0 52 718305.5 53 876350.5 54 972389.0 55 1167919.5 56 1363450.0 57 1453617.0 58 1520378.0 59 1496972.0 60 1403152.0 61 1309332.0 62 1154535.5 63 999739.0 64 897244.5 65 668324.0 66 541898.0 67 465197.0 68 388496.0 69 336336.5 70 245342.5 71 206508.0 72 169006.5 73 131505.0 74 94874.5 75 38233.5 76 18223.0 77 14080.5 78 9938.0 79 7465.0 80 4992.0 81 3005.0 82 802.5 83 587.0 84 541.5 85 496.0 86 381.0 87 177.5 88 89.0 89 55.0 90 21.0 91 10.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 1.4671238E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.487469862556502 #Duplication Level Percentage of deduplicated Percentage of total 1 79.83421607311936 7.574247189945438 2 8.077114072274393 1.5326275267426863 3 3.3392702664826834 0.9504367804855646 4 1.9646680020838654 0.7455891383879907 5 1.2486121916189241 0.5923085269002584 6 0.8540547150717422 0.48616910221304604 7 0.6382848262010841 0.423899563661693 8 0.4659366446215737 0.35364478989663034 9 0.3368752600447957 0.28764844894042946 >10 1.4248681256437328 2.399027724128324 >50 0.18241985469209565 1.2524340566168402 >100 0.923155323272901 26.335663736207643 >500 0.5480460274401691 35.97924831142913 >1k 0.1623238021710525 21.006410358662926 >5k 1.5481526196571533E-4 0.08064474578143772 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.006570679311452789 0.0 0.0 0.0 0.0 12 0.01158048148356669 0.0 0.0 0.0 0.0 13 0.01808981627862625 0.0 0.0 0.0 0.0 14 0.04460427947525628 0.0 0.0 0.0 0.0 15 0.06141949302437872 0.0 0.0 0.0 0.0 16 0.07319082411450213 0.0 0.0 0.0 0.0 17 0.08072938357349257 0.0 0.0 0.0 0.0 18 0.09068082734395011 0.0 0.0 0.0 0.0 19 0.09958941433572273 0.0 0.0 0.0 0.0 20 0.10986802886027751 0.0 0.0 0.0 0.0 21 0.12011256309794716 0.0 0.0 0.0 0.0 22 0.1307524286634843 0.0 0.0 0.0 0.0 23 0.14178762555688892 0.0 0.0 0.0 0.0 24 0.15294551148308003 0.0 0.0 0.0 0.0 25 0.16509172572893985 0.0 0.0 0.0 0.0 26 0.17771506399119147 0.0 0.0 0.0 0.0 27 0.19001804755672289 0.0 0.0 0.0 0.0 28 0.20270273033536773 0.0 0.0 0.0 0.0 29 0.21842737470416607 0.0 0.0 0.0 0.0 30 0.23672848876148012 0.0 0.0 0.0 0.0 31 0.25239860467126224 0.0 0.0 0.0 0.0 32 0.2660375354826907 0.0 0.0 0.0 0.0 33 0.27726358198265205 0.0 0.0 0.0 0.0 34 0.2887281904908093 0.0 0.0 0.0 0.0 35 0.30013827053995035 0.0 0.0 0.0 0.0 36 0.31186188922843455 0.0 0.0 0.0 0.0 37 0.3218542293431543 0.0 0.0 0.0 0.0 38 0.33355739985950744 0.0 0.0 0.0 0.0 39 0.3458740155397929 0.0 0.0 0.0 0.0 40 0.36097158262990486 0.0 0.0 0.0 0.0 41 0.37480817910526704 0.0 0.0 0.0 0.0 42 0.38695439335112686 0.0 0.0 0.0 0.0 43 0.39845308214616926 0.0 0.0 0.0 0.0 44 0.4097677373920319 0.0 0.0 0.0 0.0 45 0.42162086117067965 0.0 0.0 0.0 0.0 46 0.4330036769903126 0.0 0.0 0.0 0.0 47 0.44366399072798085 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATGA 75070 0.0 51.99041 3 TTCATGA 216700 0.0 51.780777 3 ATGGGGC 221160 0.0 51.77781 9 TGATGGG 1475620 0.0 51.668015 7 TCATGAT 572730 0.0 51.662342 4 CATGATG 1498325 0.0 51.65318 5 GATGGGG 970740 0.0 51.63725 8 TTCGCAT 8870 0.0 51.6257 1 ATGATGG 1494745 0.0 51.599957 6 CACATGA 72950 0.0 51.492462 3 TTTCATG 81740 0.0 51.37901 2 GCATGAT 395435 0.0 51.327976 4 ATGGGAG 141135 0.0 51.32515 9 ATGGGGA 281960 0.0 51.306393 9 ACATGAT 333770 0.0 51.297745 4 TACGCAT 6200 0.0 51.29032 1 GTCATGA 128895 0.0 51.26684 3 ATGGGAC 63250 0.0 51.244507 9 TACATGA 123150 0.0 51.24409 3 ATGGGGG 358330 0.0 51.18516 9 >>END_MODULE