##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528050_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 274361 Sequences flagged as poor quality 0 Sequence length 52 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.77496801659128 31.0 31.0 34.0 27.0 34.0 2 31.685691479474123 31.0 31.0 34.0 28.0 34.0 3 32.07925689146781 33.0 31.0 34.0 30.0 34.0 4 35.70395209231633 37.0 35.0 37.0 33.0 37.0 5 35.78967856218632 37.0 35.0 37.0 35.0 37.0 6 35.35133637798375 37.0 35.0 37.0 33.0 37.0 7 35.57621892324347 37.0 35.0 37.0 33.0 37.0 8 35.774217181013334 37.0 35.0 37.0 33.0 37.0 9 37.97521149142918 39.0 38.0 39.0 35.0 39.0 10 37.34848611865389 39.0 37.0 39.0 33.0 39.0 11 38.160970400311996 39.0 39.0 39.0 37.0 39.0 12 38.20264177488783 39.0 39.0 39.0 37.0 39.0 13 38.12922390573004 39.0 39.0 39.0 37.0 39.0 14 38.35300935628606 40.0 38.0 40.0 34.0 40.0 15 37.5336764336039 40.0 37.0 40.0 32.0 40.0 16 36.889302779914054 39.0 35.0 40.0 32.0 40.0 17 36.70076650835942 39.0 35.0 40.0 31.0 40.0 18 36.66372042673704 39.0 35.0 40.0 31.0 40.0 19 37.034348905274435 39.0 35.0 40.0 32.0 40.0 20 37.089611861744196 39.0 35.0 40.0 32.0 40.0 21 37.073454317486814 39.0 35.0 40.0 32.0 40.0 22 37.16102871763844 39.0 35.0 40.0 32.0 40.0 23 37.029238849544946 39.0 35.0 40.0 32.0 40.0 24 37.21585429415988 39.0 35.0 40.0 32.0 40.0 25 37.24831882082366 40.0 36.0 40.0 32.0 40.0 26 37.14185689657058 40.0 36.0 40.0 32.0 40.0 27 37.028619227951495 39.0 35.0 40.0 32.0 40.0 28 36.72883172170972 39.0 35.0 40.0 31.0 40.0 29 36.50590645171872 39.0 35.0 40.0 31.0 40.0 30 36.25582353177018 38.0 35.0 40.0 31.0 40.0 31 36.089302050947474 38.0 35.0 40.0 30.0 40.0 32 35.97379729626295 38.0 35.0 40.0 30.0 40.0 33 35.77629838060074 38.0 35.0 40.0 30.0 40.0 34 35.46528843385175 38.0 35.0 40.0 27.0 40.0 35 35.264684120556495 38.0 35.0 40.0 26.0 40.0 36 34.913129052598585 38.0 35.0 40.0 25.0 40.0 37 34.66029428380856 37.0 34.0 40.0 23.0 40.0 38 34.30879388834419 37.0 34.0 40.0 21.0 40.0 39 33.85176464584981 37.0 33.0 40.0 20.0 40.0 40 33.23554732633283 36.0 33.0 40.0 16.0 40.0 41 32.57187792725642 35.0 33.0 40.0 12.0 40.0 42 31.83677344812127 35.0 31.0 40.0 10.0 40.0 43 31.206450625271085 35.0 29.0 40.0 9.0 40.0 44 30.607655607028697 35.0 25.0 40.0 8.0 40.0 45 30.07886689434723 35.0 23.0 40.0 8.0 40.0 46 29.562652855179856 35.0 22.0 40.0 8.0 40.0 47 29.081068373420422 35.0 20.0 39.0 8.0 40.0 48 28.632188977296337 35.0 18.0 39.0 8.0 40.0 49 28.196835556073932 35.0 15.0 39.0 8.0 40.0 50 27.73982818257697 35.0 13.0 38.0 8.0 40.0 51 27.280276715713967 34.0 10.0 38.0 8.0 40.0 52 26.44937144856594 33.0 10.0 37.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 7.0 16 22.0 17 86.0 18 237.0 19 465.0 20 832.0 21 1232.0 22 1702.0 23 2336.0 24 3195.0 25 4208.0 26 5731.0 27 7381.0 28 9280.0 29 11625.0 30 13739.0 31 14273.0 32 12545.0 33 12289.0 34 14428.0 35 20679.0 36 22112.0 37 39508.0 38 54489.0 39 21959.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.215726725008295 19.8803765841355 41.5700482211393 5.333848469716906 2 20.698277087486925 21.77678314337679 37.925215318503724 19.59972445063256 3 21.54387832089838 22.776196325279468 35.74779214246922 19.932133211352927 4 24.0070563964995 21.172834331410076 33.665134621903256 21.15497465018716 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 0.0 100.0 0.0 0.0 8 0.0 0.0 100.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 100.0 0.0 0.0 11 99.14783806736381 0.5529211513298173 0.12684018501171815 0.17240059629466287 12 98.6867667051804 0.805508071482463 0.3484460254919613 0.15927919784517477 13 96.49367074766457 2.214964954931641 0.7737980252295333 0.5175662721742522 14 48.97197487981163 32.41386348642846 10.183298646673542 8.430862987086357 15 35.39242093446226 38.24413819748433 18.79640327889168 7.567037589161725 16 41.98628813862029 29.46373573503523 17.91945648251756 10.63051964382693 17 21.65249434139692 34.32849421018294 19.406548306792875 24.612463141627273 18 16.4688129872686 47.5501255644935 20.852818002558674 15.128243445679232 19 22.77036459263525 44.37912093920055 23.06924089065137 9.781273577512838 20 15.115486530520009 43.00100961871403 27.250593196554906 14.632910654211056 21 23.050287759557662 43.10306493998783 15.057169204077839 18.789478096376673 22 22.946774505122814 46.11442588414534 16.122918344808483 14.815881265923364 23 15.499287435167536 45.93036182256224 22.945316571961758 15.625034170308464 24 15.927919784517478 51.23906094525097 16.0037323088923 16.829286961339257 25 17.936222713869682 47.00084924606631 20.081935843651248 14.980992196412757 26 15.197130787539045 48.10669154872595 16.29458997452262 20.401587689212388 27 15.598426890119221 54.88717419749891 14.124820947583657 15.389577964798203 28 15.67278148133299 54.216524943413965 13.446517544403177 16.664176030849866 29 18.171678919379943 51.73330028684835 12.74634514380688 17.34867564996483 30 23.012381497370253 50.953670528974605 13.892280608395508 12.14166736525964 31 16.139320092870342 54.870043482856524 13.558778397804353 15.431858026468776 32 18.159650970801245 58.9059669559449 13.549301832257502 9.385080240996352 33 20.110365540291806 55.07779895830676 12.747803076967937 12.064032424433503 34 17.177004020250692 60.25054581372717 11.574166882319279 10.99828328370286 35 18.238743844788434 55.460506413083486 15.264924679528066 11.035825062600004 36 16.109432463068732 53.78862156064456 18.944383494738684 11.157562481548034 37 15.442063558596155 56.918075090847466 16.453869172367792 11.18599217818859 38 15.669501131720617 57.44183757895619 16.15134804144904 10.737313247874152 39 17.209078549793887 53.35197057890881 17.875354004395668 11.563596866901637 40 19.526827792579848 53.10375745823933 15.837527928532117 11.531886820648706 41 22.568076366538975 53.45767073308524 13.39986368324944 10.574389217126342 42 19.517715710323262 53.33228848123458 14.595733358604173 12.554262449837989 43 19.778321262861702 50.95184811252328 16.394822879345096 12.875007745269917 44 21.22240405888592 46.13265004865852 20.78575307715018 11.859192815305382 45 22.757243194185765 46.09365033660032 17.911802333422024 13.237304135791895 46 24.859582812425966 47.25161374976764 14.730227692711429 13.158575745094966 47 27.045389104136518 42.93066434369317 15.071019569107854 14.952926983062461 48 26.937137566928243 44.16261786478399 15.625398653598726 13.27484591468904 49 26.012078976239334 43.592565998811786 14.416772063084768 15.978582961864113 50 24.444800828106036 46.29411614624527 15.13917794438714 14.121905081261549 51 23.539424335091358 45.325319560724736 16.91894985074409 14.21630625343981 52 23.15124963096067 45.61945757596743 15.48434362026673 15.744949172805173 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 1.0 4 2.0 5 5.0 6 8.0 7 69.5 8 131.0 9 240.5 10 350.0 11 488.5 12 627.0 13 802.5 14 1206.0 15 1434.0 16 1931.5 17 2429.0 18 3306.0 19 4183.0 20 5896.0 21 7609.0 22 10253.5 23 12898.0 24 15961.5 25 19025.0 26 18982.5 27 18940.0 28 17788.0 29 16636.0 30 15423.0 31 14210.0 32 14548.5 33 14887.0 34 13447.5 35 12008.0 36 11473.5 37 10939.0 38 11558.0 39 12566.0 40 12955.0 41 14936.0 42 16917.0 43 18258.0 44 19599.0 45 19884.5 46 20170.0 47 18364.0 48 16558.0 49 14862.5 50 13167.0 51 11414.5 52 9662.0 53 7475.5 54 5289.0 55 4366.5 56 3444.0 57 3359.5 58 3275.0 59 2323.5 60 1372.0 61 1297.0 62 1222.0 63 944.0 64 481.0 65 296.0 66 213.5 67 131.0 68 104.5 69 78.0 70 58.0 71 38.0 72 24.0 73 10.0 74 9.0 75 8.0 76 8.5 77 9.0 78 7.0 79 5.0 80 4.0 81 3.0 82 7.5 83 12.0 84 8.0 85 4.0 86 2.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 274361.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.54558241014099 #Duplication Level Percentage of deduplicated Percentage of total 1 85.32947968214357 45.690166863346704 2 5.914646380050822 6.334063703397068 3 2.4186121230288733 3.885179842554258 4 1.3827148772913032 2.961530936469179 5 0.96370512359762 2.5801076057335735 6 0.6561355099790717 2.1079894813082563 7 0.49191603791432825 1.8437951522908194 8 0.37421107741750653 1.6029880067717397 9 0.3065505734763323 1.477298609545764 >10 1.996822628526809 18.667808287350397 >50 0.08192032392088702 3.0606604581248753 >100 0.08055498518887225 8.34087547276883 >500 0.0013653387320147839 0.5556197177056982 >1k 0.0013653387320147839 0.8919158626328312 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TACGGAATTAGGGCAATTGCAGGGAGAGGGGGCACCCCCAGACTACCAGGAA 1351 0.49241692514606666 No Hit TATGGAATTAGGGCTTAGATACCATAGAGAATTGCACTGGAAGTAAAATATA 1089 0.3969223030970145 No Hit TGATGAATTAGGGACGCAGAGTGCTTGAATTAGGGCTTTTGTTGCAGACGAC 972 0.35427775813617823 No Hit GTTGGAATTAGGGGGGCAGACTGTCTGGACAAAGTCTGTGGTTTAGCCAAGG 548 0.19973684306442968 No Hit CTACGAATTAGGGATCCACATGAGTCAGCAATGCTTTGTTATCCATCTCGAC 491 0.17896129551940693 No Hit ATAAGAATTAGGGCCGTGTCTACTAAAAATACAAAAAAAAATTTAGCCGGGT 471 0.17167162971413577 No Hit TGGCGAATTAGGGACAATCTGGTATTCTTCATGCAGCCGATGAAAGAGATTT 455 0.16583989706991883 No Hit TGTAGAATTAGGGGGCACTCAAAGTATGCCTATTCCAGAGACACCAGACATC 450 0.16401748061860105 No Hit GTTCGAATTAGGGGAGGATAACTGATGCATCACCATCATCACCATGCTCCTG 407 0.14834469913726805 No Hit GGTTGAATTAGGGAGAATCACCTCGCCAACCACATCTGCTTTATGGGGGAAA 407 0.14834469913726805 No Hit TTTAGAATTAGGGTGGATCACCTGAGGTTGGAAGTTGAAGACCAGCCTGGCC 405 0.14761573255674093 No Hit ACCTGAATTAGGGTGTTTTTACCCACCAACATTCTTCTCTGTTCCTTGAGGT 401 0.1461577993956867 No Hit TGGGGAATTAGGGACCCAGCCACACCAGCTTGACTAAGGTGTTTGAGCCATT 390 0.14214848320278756 No Hit TTAGGAATTAGGGGGCACATGCCTGTAATCCCAGCTACTCAGGAGGCTGAGG 386 0.14069055004173334 No Hit TTTGGAATTAGGGGAACCTGCCCGGGACCGCTGGCGGCCCCAACTGGATTTG 384 0.13996158346120624 No Hit CGTTGAATTAGGGGTGTCCGTTGTCGTCTGGGCTCGGGTAGATCGATGCACA 356 0.12975605133382662 No Hit GTTTGAATTAGGGTGGTGGCGGGCACCTGTAATCCCAGCTACTTGGGAGGCT 346 0.12611121843119102 No Hit GGTCGAATTAGGGGAAGTCCAAGTTTATCCATCGTACCTGGTCATTCTCATT 342 0.12465328527013679 No Hit TATTGAATTAGGGCACCATCTTCACAAAGCCCTAAAAATGAAGAATAACAAC 317 0.11554120301354785 No Hit GAGGGAATTAGGGAACTGTGGATCGATATCCTGGCTCAGACGACGGGTCATA 314 0.11444775314275718 No Hit AGCAGAATTAGGGGGGAATTCACACCGGCGCACGCCACAGGCGTCATACTTC 302 0.11007395365959449 No Hit GTTCGAATTAGGGAGCCGTTCGGCCGAATGACTCGGTGTCGCATCGCGGCTT 298 0.10861602049854024 No Hit GGGTGAATTAGGGGGAGTAGTCGAATTAGGGGTTTTGAATCGTCGGGCCATC 295 0.10752257062774956 No Hit GAGTGAATTAGGGCACTTTCACTGAATAACATAACTCAAATTAGTTCTGTGA 294 0.10715808733748602 No Hit TTCAGAATTAGGGAATCCTTTGCTTTGGATAGGAATTATTGCTTCAATTTAC 294 0.10715808733748602 No Hit CATGGAATTAGGGTGCCAGGGATGTGATAGACACTAAAGATGCATTCGTTAA 286 0.10424222101537756 No Hit GTGTGAATTAGGGATTGAGTTTCGAGCAAACGAAGCAAACTTGTGAAACAGC 279 0.10169083798353264 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.1713071464238722 0.0 0.0 0.0 0.0 11 0.18661544461494162 0.0 0.0 0.0 0.0 12 0.2103068584820729 0.0 0.0 0.0 0.0 13 0.31090424659481486 0.0 0.0 0.0 0.0 14 0.6830416859539075 0.0 0.0 0.0 0.0 15 1.1860286265176172 0.0 0.0 0.0 0.0 16 1.394877551838636 0.0 0.0 0.0 0.0 17 1.5516053666519658 0.0 0.0 0.0 0.0 18 1.788155022033015 0.0 0.0 0.0 0.0 19 2.005751546320359 0.0 0.0 0.0 0.0 20 2.2306377364129744 0.0 0.0 0.0 0.0 21 2.4329259625092488 0.0 0.0 0.0 0.0 22 2.6844194327911035 0.0 0.0 0.0 0.0 23 2.885978692306851 0.0 0.0 0.0 0.0 24 3.1239862808489547 0.0 0.0 0.0 0.0 25 3.3966197819660957 0.0 0.0 0.0 0.0 26 3.7425144244262123 0.0 0.0 0.0 0.0 27 4.111735997463196 0.0 0.0 0.0 0.0 28 4.470023071792274 0.0 0.0 0.0 0.0 29 4.878973323467986 0.0 0.0 0.0 0.0 30 5.3498857344885025 0.0 0.0 0.0 0.0 31 5.76867703500133 0.0 0.0 0.0 0.0 32 6.148833106746221 0.0 0.0 0.0 0.0 33 6.445886988311021 0.0 0.0 0.0 0.0 34 6.707950474010519 0.0 0.0 0.0 0.0 35 6.943406679520777 0.0 0.0 0.0 0.0 36 7.155900437744432 0.0 0.0 0.0 0.0 37 7.365842812936241 0.0 0.0 0.0 0.0 38 7.58599072025543 0.0 0.0 0.0 0.0 39 7.81853105944358 0.0 0.0 0.0 0.0 40 8.065286246952008 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTTTGT 85 0.0 46.000004 36 TAGAAGC 40 5.5842975E-9 46.000004 36 CTTTCAC 20 6.303013E-4 46.000004 16 TGTGAGT 20 6.303013E-4 46.000004 24 GATGGCA 20 6.303013E-4 46.000004 41 AACGTTA 20 6.303013E-4 46.000004 42 TTCACTG 20 6.303013E-4 46.000004 18 TGTGAAC 20 6.303013E-4 46.000004 23 ACTGTGG 45 3.074092E-10 46.000004 15 ACAAAGC 40 5.5842975E-9 46.000004 24 TGTTGCA 85 0.0 46.000004 40 GTGTCTC 20 6.303013E-4 46.000004 29 TGCATGC 40 5.5842975E-9 46.000004 31 CCTACTC 20 6.303013E-4 46.000004 29 TTCACAA 40 5.5842975E-9 46.000004 21 ACTCGGT 40 5.5842975E-9 46.000004 31 GTGTCGC 40 5.5842975E-9 46.000004 36 TGGCAAT 20 6.303013E-4 46.000004 43 CCGTGCC 40 5.5842975E-9 46.000004 35 CTTTATG 45 3.074092E-10 46.000004 39 >>END_MODULE