##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528049_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 272916 Sequences flagged as poor quality 0 Sequence length 52 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.685060604728196 31.0 31.0 34.0 27.0 34.0 2 31.48049583021882 31.0 31.0 34.0 28.0 34.0 3 31.988868369754798 33.0 31.0 34.0 30.0 34.0 4 35.67121385334682 37.0 35.0 37.0 33.0 37.0 5 35.77126661683448 37.0 35.0 37.0 35.0 37.0 6 35.333472570314676 37.0 35.0 37.0 33.0 37.0 7 35.572263993316625 37.0 35.0 37.0 33.0 37.0 8 35.72614650661742 37.0 35.0 37.0 33.0 37.0 9 37.968111067141535 39.0 38.0 39.0 35.0 39.0 10 37.33878556039221 39.0 37.0 39.0 33.0 39.0 11 38.15107212475633 39.0 39.0 39.0 37.0 39.0 12 38.18481144381421 39.0 39.0 39.0 37.0 39.0 13 38.13094505269021 39.0 39.0 39.0 37.0 39.0 14 38.38854812469771 40.0 38.0 40.0 34.0 40.0 15 37.5584612115083 40.0 37.0 40.0 32.0 40.0 16 36.9166556742734 39.0 35.0 40.0 32.0 40.0 17 36.761545677058145 39.0 35.0 40.0 31.0 40.0 18 36.747358161485586 39.0 35.0 40.0 31.0 40.0 19 37.11991601811546 39.0 35.0 40.0 32.0 40.0 20 37.13686262439725 39.0 35.0 40.0 32.0 40.0 21 37.3036868487007 39.0 36.0 40.0 33.0 40.0 22 37.29873660760087 40.0 36.0 40.0 32.0 40.0 23 37.127207638980494 39.0 35.0 40.0 32.0 40.0 24 37.314371454953175 39.0 36.0 40.0 33.0 40.0 25 37.35373521523106 40.0 36.0 40.0 33.0 40.0 26 37.1934551290507 40.0 36.0 40.0 32.0 40.0 27 37.04213017924929 39.0 35.0 40.0 32.0 40.0 28 36.52080860044849 39.0 35.0 40.0 31.0 40.0 29 36.40153380527342 39.0 35.0 40.0 31.0 40.0 30 36.234269885239414 38.0 35.0 40.0 31.0 40.0 31 36.11762960031658 38.0 35.0 40.0 30.0 40.0 32 35.99451113163025 38.0 35.0 40.0 30.0 40.0 33 35.796728663764675 38.0 35.0 40.0 30.0 40.0 34 35.53018511190256 38.0 35.0 40.0 28.0 40.0 35 35.26069559864574 38.0 35.0 40.0 26.0 40.0 36 34.52013073619722 37.0 34.0 40.0 23.0 40.0 37 34.50539360096147 37.0 34.0 40.0 23.0 40.0 38 34.246167318882 37.0 33.0 40.0 21.0 40.0 39 33.841581292412314 37.0 33.0 40.0 20.0 40.0 40 33.25023450438963 36.0 33.0 40.0 16.0 40.0 41 32.59489366691583 35.0 33.0 40.0 12.0 40.0 42 31.697558955869205 35.0 31.0 40.0 10.0 40.0 43 31.075939116797844 35.0 28.0 40.0 9.0 40.0 44 30.492484867138607 35.0 25.0 40.0 8.0 40.0 45 29.75590657931378 35.0 23.0 40.0 8.0 40.0 46 29.383070248721218 35.0 20.0 40.0 8.0 40.0 47 28.98613859209427 35.0 20.0 39.0 8.0 40.0 48 28.537524366471736 35.0 17.0 39.0 8.0 40.0 49 28.134960940362603 35.0 15.0 39.0 8.0 40.0 50 27.626793592167555 35.0 12.0 38.0 8.0 40.0 51 27.231745298919815 34.0 10.0 38.0 8.0 40.0 52 26.493507159712145 33.0 10.0 37.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 2.0 15 9.0 16 28.0 17 95.0 18 186.0 19 389.0 20 705.0 21 1124.0 22 1622.0 23 2285.0 24 3191.0 25 4388.0 26 5628.0 27 7467.0 28 9330.0 29 11864.0 30 13978.0 31 14583.0 32 12738.0 33 12230.0 34 14697.0 35 20385.0 36 22124.0 37 39477.0 38 52779.0 39 21611.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.33003561535418 19.941667033079778 41.319307039528645 5.408990312037403 2 20.84524175936918 21.73159506954521 37.817496958771194 19.605666212314414 3 21.610312330533937 22.758284600389864 35.7234460420056 19.9079570270706 4 23.982837209984023 20.968722977033227 33.73785340544344 21.31058640753932 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 0.0 100.0 0.0 0.0 8 0.0 0.0 100.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 100.0 0.0 0.0 11 99.09752451303699 0.575268580808747 0.12751176186079233 0.19969514429348223 12 98.66552345776722 0.7855897052572953 0.37264213164490173 0.17624470533057793 13 96.42527371059228 2.2351199636518193 0.823696668572015 0.5159096571838954 14 49.10228788345132 32.371132509636666 10.242345630157265 8.284233976754752 15 35.478682085330284 38.156795497515716 18.787099327265533 7.577423089888464 16 41.72492635096513 29.8066071611778 17.872898620821058 10.595567867036012 17 21.682129299857834 34.38054199827053 19.479620102888802 24.457708598982837 18 16.406146946313154 47.57104750179542 20.865760893461722 15.1570446584297 19 22.534406190915888 44.63204795614768 23.003048557065178 9.830497295871258 20 15.088891820193759 43.233082706766915 27.102112005159096 14.575913467880227 21 22.55236043324686 43.602427120432665 14.94049451113163 18.90471793518885 22 22.815445045361944 46.33000630230547 16.1562532061147 14.698295446217886 23 15.409869703498513 46.11565463366018 22.861613097070162 15.612862565771152 24 15.873382286124668 51.39969807559835 15.896832725087574 16.830086913189408 25 18.02092951677439 47.094710460361426 20.11241554177842 14.771944481085756 26 15.119304108223774 48.125430535402835 16.276070292690793 20.4791950636826 27 15.55680136012546 55.08141699277434 13.953744009145671 15.408037637954536 28 15.927611426226385 54.19396444327192 13.398994562429465 16.479429568072227 29 18.23674683785487 51.74742411584516 12.646015623854959 17.369813422445002 30 22.84732298582714 51.251667179645025 13.829529965264037 12.071479869263802 31 16.140497442436498 54.76117193568717 13.580735464391974 15.517595157484354 32 18.059769306306702 58.82652537777191 13.621773732577056 9.491931583344327 33 20.086766624162745 55.251066262146594 12.656641604010025 12.005525509680634 34 17.242668073693004 60.27092585264331 11.545310645033636 10.941095428630055 35 18.358395989974937 55.455158363745625 15.106479649415938 11.079965996863503 36 16.59594893666916 52.90565595274737 18.924870656172597 11.573524454410881 37 15.375426871271747 56.87317709478374 16.650910902988468 11.100485130956045 38 15.69713758079409 57.505972533673365 16.136100485130957 10.660789400401589 39 17.40315701534538 53.216374269005854 17.88059329610576 11.49987541954301 40 19.37482595377332 53.14272523413798 15.871183807471898 11.611265004616806 41 22.75608612173709 53.328130267188435 13.292734760878805 10.623048850195664 42 20.001392369813423 53.021442495126706 14.581776077620953 12.39538905743892 43 19.88194169634613 50.979055826701256 16.389291943308564 12.749710533644052 44 21.52200677131425 45.95773058376936 20.602309868237846 11.917952776678538 45 22.800788521010126 45.79577598968181 17.97989124858931 13.423544240718757 46 25.04470239927304 47.190710694865814 14.79539492004866 12.969191985812484 47 27.23218865878146 42.93005906579314 14.933166248955724 14.904586026469682 48 27.15047853552009 44.11357340720222 15.556068533907869 13.179879523369827 49 26.18094944964751 43.468686335722346 14.413592460683875 15.93677175394627 50 24.763297131718183 45.83498219232291 15.283823594072901 14.117897081886003 51 23.54350789253836 45.20328599275968 16.863064092980988 14.390142021720969 52 23.13056031892597 45.71223380087646 15.551671576602324 15.605534303595245 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.5 2 1.0 3 0.5 4 0.0 5 1.0 6 2.0 7 81.0 8 160.0 9 224.0 10 288.0 11 464.5 12 641.0 13 811.5 14 1187.5 15 1393.0 16 1852.5 17 2312.0 18 3241.0 19 4170.0 20 5939.5 21 7709.0 22 10224.0 23 12739.0 24 15650.0 25 18561.0 26 18747.0 27 18933.0 28 17853.5 29 16774.0 30 15448.5 31 14123.0 32 14151.5 33 14180.0 34 13191.5 35 12203.0 36 11534.0 37 10865.0 38 11572.0 39 12739.0 40 13199.0 41 14972.5 42 16746.0 43 18091.5 44 19437.0 45 19718.0 46 19999.0 47 18307.5 48 16616.0 49 14918.0 50 13220.0 51 11538.0 52 9856.0 53 7513.0 54 5170.0 55 4278.5 56 3387.0 57 3233.5 58 3080.0 59 2261.0 60 1442.0 61 1287.5 62 1133.0 63 910.0 64 486.5 65 286.0 66 224.0 67 162.0 68 120.5 69 79.0 70 65.5 71 52.0 72 33.5 73 15.0 74 10.5 75 6.0 76 6.0 77 6.0 78 3.0 79 0.0 80 5.5 81 11.0 82 10.0 83 9.0 84 6.0 85 3.0 86 1.5 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 272916.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.45920392588513 #Duplication Level Percentage of deduplicated Percentage of total 1 85.9604297552103 47.672970033509316 2 5.878490881821994 6.5203284918284465 3 2.2132328834754715 3.6823240146042284 4 1.3457205145162197 2.9853035376720833 5 0.8707294907598019 2.414498219616498 6 0.6242278224049597 2.0771506859380713 7 0.48674666001729416 1.8896207594699812 8 0.36348587432968527 1.6126909782902936 9 0.30260827315746663 1.5104172537629903 >10 1.804715640408993 17.549423026333688 >50 0.07347027869983433 2.8885232282842597 >100 0.07347027869983433 7.831016872166906 >500 0.0020037348736318453 0.8971535340990608 >1k 6.679116245439485E-4 0.46857936442415854 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TACGGAATTAGGGCAATTGCAGGGAGAGGGGGCACCCCCAGACTACCAGGAA 1265 0.463512582626156 No Hit TGATGAATTAGGGACGCAGAGTGCTTGAATTAGGGCTTTTGTTGCAGACGAC 951 0.3484588664644066 No Hit TATGGAATTAGGGCTTAGATACCATAGAGAATTGCACTGGAAGTAAAATATA 936 0.3429626698324759 No Hit GTTGGAATTAGGGGGGCAGACTGTCTGGACAAAGTCTGTGGTTTAGCCAAGG 535 0.19603101320552846 No Hit CTACGAATTAGGGATCCACATGAGTCAGCAATGCTTTGTTATCCATCTCGAC 470 0.17221416113382873 No Hit ATAAGAATTAGGGCCGTGTCTACTAAAAATACAAAAAAAAATTTAGCCGGGT 440 0.1612217678699673 No Hit GTTCGAATTAGGGGAGGATAACTGATGCATCACCATCATCACCATGCTCCTG 425 0.1557255712380366 No Hit TGGCGAATTAGGGACAATCTGGTATTCTTCATGCAGCCGATGAAAGAGATTT 413 0.15132861393249206 No Hit TGTAGAATTAGGGGGCACTCAAAGTATGCCTATTCCAGAGACACCAGACATC 412 0.15096220082369666 No Hit GGTTGAATTAGGGAGAATCACCTCGCCAACCACATCTGCTTTATGGGGGAAA 403 0.14766448284453823 No Hit ACCTGAATTAGGGTGTTTTTACCCACCAACATTCTTCTCTGTTCCTTGAGGT 379 0.13887056823344912 No Hit TTTAGAATTAGGGTGGATCACCTGAGGTTGGAAGTTGAAGACCAGCCTGGCC 377 0.13813774201585835 No Hit TTTGGAATTAGGGGAACCTGCCCGGGACCGCTGGCGGCCCCAACTGGATTTG 364 0.1333743716015184 No Hit TGGGGAATTAGGGACCCAGCCACACCAGCTTGACTAAGGTGTTTGAGCCATT 349 0.1278781749695877 No Hit TTAGGAATTAGGGGGCACATGCCTGTAATCCCAGCTACTCAGGAGGCTGAGG 331 0.12128273901127087 No Hit GGTCGAATTAGGGGAAGTCCAAGTTTATCCATCGTACCTGGTCATTCTCATT 311 0.11395447683536326 No Hit CGTTGAATTAGGGGTGTCCGTTGTCGTCTGGGCTCGGGTAGATCGATGCACA 303 0.11102317196500022 No Hit TATTGAATTAGGGCACCATCTTCACAAAGCCCTAAAAATGAAGAATAACAAC 296 0.10845828020343257 No Hit GGGTGAATTAGGGGGAGTAGTCGAATTAGGGGTTTTGAATCGTCGGGCCATC 291 0.10662621465945565 No Hit AGCAGAATTAGGGGGGAATTCACACCGGCGCACGCCACAGGCGTCATACTTC 290 0.10625980155066028 No Hit GAGTGAATTAGGGCACTTTCACTGAATAACATAACTCAAATTAGTTCTGTGA 290 0.10625980155066028 No Hit GTTTGAATTAGGGTGGTGGCGGGCACCTGTAATCCCAGCTACTTGGGAGGCT 286 0.10479414911547875 No Hit GTTCGAATTAGGGAGCCGTTCGGCCGAATGACTCGGTGTCGCATCGCGGCTT 280 0.10259567046270648 No Hit CATGGAATTAGGGTGCCAGGGATGTGATAGACACTAAAGATGCATTCGTTAA 273 0.10003077870113881 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.16195459408755808 0.0 0.0 0.0 0.0 11 0.1802752495273271 0.0 0.0 0.0 0.0 12 0.19419894766155155 0.0 0.0 0.0 0.0 13 0.2956953787978719 0.0 0.0 0.0 0.0 14 0.6778642512714534 0.0 0.0 0.0 0.0 15 1.131117266851339 0.0 0.0 0.0 0.0 16 1.3212856703161413 0.0 0.0 0.0 0.0 17 1.492400592123584 0.0 0.0 0.0 0.0 18 1.7338668308197394 0.0 0.0 0.0 0.0 19 1.9559131747497398 0.0 0.0 0.0 0.0 20 2.186387020182034 0.0 0.0 0.0 0.0 21 2.4135631476351698 0.0 0.0 0.0 0.0 22 2.6616248222896424 0.0 0.0 0.0 0.0 23 2.889533775960369 0.0 0.0 0.0 0.0 24 3.1291679491125475 0.0 0.0 0.0 0.0 25 3.402512128273901 0.0 0.0 0.0 0.0 26 3.7462076243239677 0.0 0.0 0.0 0.0 27 4.1148192117721205 0.0 0.0 0.0 0.0 28 4.475003297717979 0.0 0.0 0.0 0.0 29 4.879156956719283 0.0 0.0 0.0 0.0 30 5.362089434111595 0.0 0.0 0.0 0.0 31 5.770640050418444 0.0 0.0 0.0 0.0 32 6.126060765949963 0.0 0.0 0.0 0.0 33 6.4129622301367455 0.0 0.0 0.0 0.0 34 6.665787275205558 0.0 0.0 0.0 0.0 35 6.886734379809172 0.0 0.0 0.0 0.0 36 7.102918113998446 0.0 0.0 0.0 0.0 37 7.308475868032655 0.0 0.0 0.0 0.0 38 7.533087103724223 0.0 0.0 0.0 0.0 39 7.7540342083278375 0.0 0.0 0.0 0.0 40 7.990370663500857 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGGTTTA 55 1.8189894E-12 46.000004 39 TTCACTG 55 1.8189894E-12 46.000004 18 TGTGAAC 35 1.0157419E-7 46.000004 23 ACTGTCA 35 1.0157419E-7 46.000004 22 TTGTTAT 75 0.0 46.000004 36 CCTACTC 35 1.0157419E-7 46.000004 29 CCGTGCC 55 1.8189894E-12 46.000004 35 CGATACC 35 1.0157419E-7 46.000004 43 ACTTGTG 35 1.0157419E-7 46.000004 39 GAAATGA 35 1.0157419E-7 46.000004 27 CGCCTGA 35 1.0157419E-7 46.000004 15 GATACCG 35 1.0157419E-7 46.000004 44 AACGAAG 35 1.0157419E-7 46.000004 29 CAACTTT 55 1.8189894E-12 46.000004 16 GCCTACC 55 1.8189894E-12 46.000004 39 TTCGATG 55 1.8189894E-12 46.000004 21 GACGGGT 35 1.0157419E-7 46.000004 42 GGATTTT 35 1.0157419E-7 46.000004 45 CATTCTC 35 1.0157419E-7 46.000004 43 CACTGTC 35 1.0157419E-7 46.000004 21 >>END_MODULE