##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528047_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1926945 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.645044876734936 31.0 31.0 34.0 30.0 34.0 2 32.24519277924383 33.0 31.0 34.0 30.0 34.0 3 32.41937522866506 34.0 31.0 34.0 30.0 34.0 4 36.033713468729 37.0 35.0 37.0 35.0 37.0 5 35.696772352091 37.0 35.0 37.0 33.0 37.0 6 35.909121433149366 37.0 35.0 37.0 35.0 37.0 7 35.87200932045284 37.0 35.0 37.0 35.0 37.0 8 35.42253048218813 37.0 35.0 37.0 33.0 37.0 9 37.819706841658686 39.0 38.0 39.0 35.0 39.0 10 37.677114292312446 39.0 37.0 39.0 35.0 39.0 11 38.170127844852864 39.0 39.0 39.0 37.0 39.0 12 38.22773509363267 39.0 39.0 39.0 37.0 39.0 13 38.09952230084408 39.0 39.0 39.0 37.0 39.0 14 38.47852896683611 40.0 38.0 40.0 35.0 40.0 15 36.90120371883992 39.0 35.0 40.0 32.0 40.0 16 36.53404482224454 39.0 35.0 40.0 31.0 40.0 17 36.557342321654225 39.0 35.0 40.0 31.0 40.0 18 36.76161177407762 39.0 35.0 40.0 31.0 40.0 19 36.96659531019308 39.0 35.0 40.0 32.0 40.0 20 36.98955756391594 39.0 35.0 40.0 32.0 40.0 21 36.83880494772814 39.0 35.0 40.0 32.0 40.0 22 36.876661243574674 39.0 35.0 40.0 32.0 40.0 23 36.77141537511449 39.0 35.0 40.0 31.0 40.0 24 36.75461728279738 39.0 35.0 40.0 31.0 40.0 25 36.94858234147835 39.0 35.0 40.0 32.0 40.0 26 36.997988525879045 39.0 35.0 40.0 32.0 40.0 27 36.956612669277014 39.0 35.0 40.0 32.0 40.0 28 36.903430040815905 39.0 35.0 40.0 32.0 40.0 29 36.886088082431 39.0 35.0 40.0 32.0 40.0 30 36.810750696049965 39.0 35.0 40.0 32.0 40.0 31 36.76245352098788 39.0 35.0 40.0 32.0 40.0 32 36.64968175012779 39.0 35.0 40.0 32.0 40.0 33 36.54629426371796 39.0 35.0 40.0 31.0 40.0 34 36.46071320146657 39.0 35.0 40.0 31.0 40.0 35 36.35966880217131 39.0 35.0 40.0 31.0 40.0 36 36.25278977863925 38.0 35.0 40.0 31.0 40.0 37 36.09951814919471 38.0 35.0 40.0 31.0 40.0 38 35.894065995656334 38.0 35.0 40.0 30.0 40.0 39 35.7323358995716 38.0 35.0 40.0 30.0 40.0 40 35.51974290911261 37.0 35.0 40.0 30.0 40.0 41 35.31413247394191 37.0 35.0 40.0 29.0 40.0 42 35.09983523141553 37.0 34.0 40.0 28.0 40.0 43 34.861071281224945 36.0 34.0 40.0 27.0 40.0 44 34.69322632457076 36.0 34.0 40.0 27.0 40.0 45 34.52433048166917 35.0 34.0 40.0 26.0 40.0 46 34.355429449205865 35.0 34.0 40.0 26.0 40.0 47 34.20715796247428 35.0 34.0 39.0 26.0 40.0 48 34.04672318099375 35.0 33.0 39.0 25.0 40.0 49 33.88723964617568 35.0 33.0 39.0 25.0 40.0 50 33.697232147259 35.0 33.0 39.0 24.0 40.0 51 33.519834764354975 35.0 33.0 39.0 24.0 40.0 52 32.83511672621689 35.0 33.0 37.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 2.0 14 7.0 15 17.0 16 39.0 17 160.0 18 380.0 19 830.0 20 1653.0 21 2714.0 22 4404.0 23 6728.0 24 9661.0 25 13248.0 26 17823.0 27 23404.0 28 29918.0 29 37786.0 30 46531.0 31 54186.0 32 64453.0 33 82925.0 34 144848.0 35 237297.0 36 168172.0 37 305855.0 38 474408.0 39 199493.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.675494111144843 20.058745838620197 34.94567826274232 16.320081787492636 2 22.060152209845118 22.036591599656454 35.495045265952065 20.408210924546367 3 19.539530188977892 23.826575226589238 35.264836308249585 21.369058276183285 4 19.790756871628407 22.282213555654156 37.34963893624364 20.577390636473798 5 0.0 0.0 100.0 0.0 6 100.0 0.0 0.0 0.0 7 100.0 0.0 0.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 100.0 0.0 0.0 0.0 11 99.05876919164793 0.6196336688384982 0.2377857178072026 0.08381142170637979 12 98.58236742615902 1.0168427225478673 0.12537981104805793 0.2754100402450511 13 93.38958818233006 3.3392234858805 1.796055414139999 1.4751329176494399 14 54.569798307683925 27.1209090036301 7.6216498135649955 10.68764287512098 15 32.50808922932414 30.358780349205606 17.18440329122004 19.948727130250216 16 28.57917584570395 21.471240746362767 25.90105062676932 24.048532781163967 17 22.14152453754518 21.38332957090109 28.25311568311498 28.22203020843875 18 23.337510930514362 21.82532454221579 29.531979376681743 25.305185150588105 19 25.738098388900564 21.353333904185124 27.239179115127833 25.66938859178648 20 27.488797033646524 20.793847255630027 24.71502819229402 27.002327518429432 21 31.338206331784253 21.79787176074045 19.800565143270827 27.063356764204478 22 29.573392079171956 22.14105747699078 21.849196526107388 26.43635391772988 23 28.86382330580271 23.348357114499898 20.54651274426618 27.24130683543121 24 29.75118646354722 24.071211165860987 21.319601753033947 24.858000617557842 25 31.77537501070347 22.08200026466765 21.16827413340806 24.97435059122082 26 30.41534657190527 22.78752117989875 20.45782313454717 26.339309113648806 27 29.844390991958775 24.45150224837761 19.776952637465005 25.92715412219861 28 30.125405758856637 23.483752779658996 20.6683117577305 25.72252970375387 29 30.947172856516403 22.298923944378277 20.02558453925774 26.728318659847584 30 30.2026783328014 22.238309863540476 20.130309894677843 27.42870190898028 31 30.234853615437906 22.732148556393668 19.430082332396616 27.602915495771807 32 30.153118018417757 24.4972741827089 20.016191432552564 25.333416366320783 33 30.62785912415767 24.694996484071936 19.998702609571108 24.678441782199283 34 27.862445477167224 26.181494541878465 19.769998624766146 26.186061356188162 35 30.13121806797807 25.84318701364076 19.779080357768386 24.246514560612784 36 31.71828983183225 24.41273622236234 20.079711667951084 23.789262277854323 37 30.35078842416364 25.540739356857618 19.679388877212375 24.429083341766372 38 30.03188985674215 26.509941902856593 21.3118174104606 22.14635082994066 39 31.08381401648724 26.213462242046347 20.624148587531042 22.078575153935372 40 30.752823770268485 26.4544654881172 20.207790051091234 22.584920690523084 41 32.02784718816572 25.682621974161172 20.076961200241833 22.21256963743127 42 32.655939842600596 26.01392359408286 18.25397196079805 23.076164602518496 43 31.030413426434073 25.785738565449456 19.16967012550955 24.014177882606923 44 29.61828178801159 26.330590649966656 21.115703873229386 22.935423688792365 45 28.661897459450064 23.982365869290508 20.960172708613893 26.395563962645536 46 29.068707202333226 22.87517287727465 21.458474424542477 26.597645495849648 47 28.507975058966394 23.124531317707564 22.901535850789724 25.465957772536317 48 27.918440848078173 23.936074978787666 22.13976008656189 26.00572408657227 49 28.642280916165223 22.942585283959843 22.69649626740774 25.7186375324672 50 27.799288511088793 23.998868675546007 21.058774381209634 27.143068432155566 51 28.4267584181178 24.869521444566402 22.092586970567403 24.611133166748402 52 29.527049293051956 24.434065321013314 22.15299346893658 23.88589191699815 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 1.0 6 2.0 7 2.5 8 3.0 9 57.0 10 111.0 11 358.0 12 605.0 13 1043.5 14 1812.0 15 2142.0 16 2146.5 17 2151.0 18 2376.5 19 2602.0 20 3117.5 21 3633.0 22 4778.5 23 5924.0 24 7515.5 25 9107.0 26 11340.5 27 13574.0 28 15309.5 29 17045.0 30 18748.0 31 20451.0 32 20677.0 33 20903.0 34 22436.5 35 23970.0 36 25858.0 37 27746.0 38 29372.0 39 34329.0 40 37660.0 41 39786.5 42 41913.0 43 43858.5 44 45804.0 45 50071.5 46 54339.0 47 60203.0 48 66067.0 49 75673.5 50 85280.0 51 90765.0 52 96250.0 53 108125.0 54 120000.0 55 132694.0 56 145388.0 57 154863.5 58 164339.0 59 167128.5 60 169918.0 61 177623.0 62 185328.0 63 164998.5 64 133651.5 65 122634.0 66 105404.0 67 88174.0 68 75395.0 69 62616.0 70 54296.0 71 45976.0 72 40457.0 73 34938.0 74 26552.0 75 18166.0 76 13670.0 77 9174.0 78 6333.0 79 3492.0 80 2399.5 81 1307.0 82 904.5 83 502.0 84 475.5 85 449.0 86 255.5 87 62.0 88 55.5 89 25.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1926945.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.051412618039773 #Duplication Level Percentage of deduplicated Percentage of total 1 78.45444976006365 9.454869457797985 2 6.918440828061378 1.6675397018492084 3 3.232434581947198 1.1686620872359974 4 2.0099667301057234 0.9689175365214504 5 1.305781299086239 0.7868254612104133 6 0.9300623144121837 0.672513882688216 7 0.6940535061182609 0.5855027626859848 8 0.4816130405639351 0.4643293979251767 9 0.40615486981560245 0.4405265930676648 >10 2.5389015801497195 5.9492759903655275 >50 0.6268404399211157 5.607564294992364 >100 2.2588766680406756 60.54526062292497 >500 0.13290056287629118 10.154394559284798 >1k 0.00952381883804041 1.5338176514502462 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TGCCTGGATGGGGGTGAATGGCCACCGGGGCCACCGTTATGCAATGTTCAGC 3244 0.16834938205293873 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.003477006349428759 0.0 0.0 0.0 0.0 12 0.012870113054601973 0.0 0.0 0.0 0.0 13 0.027660363943963113 0.0 0.0 0.0 0.0 14 0.09284125909146343 0.0 0.0 0.0 0.0 15 0.1572956155987846 0.0 0.0 0.0 0.0 16 0.18998985440684607 0.0 0.0 0.0 0.0 17 0.21095568373772994 0.0 0.0 0.0 0.0 18 0.23519093694941995 0.0 0.0 0.0 0.0 19 0.2586996515209308 0.0 0.0 0.0 0.0 20 0.2848031469502243 0.0 0.0 0.0 0.0 21 0.31355331885445614 0.0 0.0 0.0 0.0 22 0.3489980253717672 0.0 0.0 0.0 0.0 23 0.3841313581861444 0.0 0.0 0.0 0.0 24 0.42590732999644515 0.0 0.0 0.0 0.0 25 0.4721982204992877 0.0 0.0 0.0 0.0 26 0.5206687269226677 0.0 0.0 0.0 0.0 27 0.5686202771744913 0.0 0.0 0.0 0.0 28 0.6149630632944895 0.0 0.0 0.0 0.0 29 0.668000384027567 0.0 0.0 0.0 0.0 30 0.7245147111100732 0.0 0.0 0.0 0.0 31 0.7779671967803959 0.0 0.0 0.0 0.0 32 0.8215595151911446 0.0 0.0 0.0 0.0 33 0.8611558710809079 0.0 0.0 0.0 0.0 34 0.9020496173995625 0.0 0.0 0.0 0.0 35 0.9355222904649588 0.0 0.0 0.0 0.0 36 0.9667115563755063 0.0 0.0 0.0 0.0 37 0.9983678828404547 0.0 0.0 0.0 0.0 38 1.0322557208430962 0.0 0.0 0.0 0.0 39 1.0715407030299255 0.0 0.0 0.0 0.0 40 1.1143545871833394 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTTA 35 1.0200529E-7 46.000004 33 TTTACGG 35 1.0200529E-7 46.000004 15 ATAGCGA 35 1.0200529E-7 46.000004 29 CGTTAGC 75 0.0 46.000004 30 CTAAAGG 35 1.0200529E-7 46.000004 43 TCATCGA 35 1.0200529E-7 46.000004 37 CGGTAAT 70 0.0 46.000004 28 CGTTTAA 35 1.0200529E-7 46.000004 34 ATCGCAT 70 0.0 46.000004 44 TAATCAT 20 6.312522E-4 46.0 25 TATTTCG 20 6.312522E-4 46.0 41 ACAACGG 40 5.6152203E-9 46.0 38 TTTAGGC 30 1.8620631E-6 46.0 44 CGGCGTA 30 1.8620631E-6 46.0 33 CTATGCG 50 1.6370905E-11 46.0 17 TGATACT 190 0.0 46.0 32 TCGTTAA 25 3.4180237E-5 46.0 34 CGACGTT 20 6.312522E-4 46.0 31 CGACGTA 20 6.312522E-4 46.0 36 ACGTTAG 20 6.312522E-4 46.0 33 >>END_MODULE