##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528046_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1911021 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.586803598704567 31.0 31.0 34.0 30.0 34.0 2 32.078288516976 33.0 31.0 34.0 30.0 34.0 3 32.34514691361319 34.0 31.0 34.0 30.0 34.0 4 36.00510774083592 37.0 35.0 37.0 35.0 37.0 5 35.677921383386156 37.0 35.0 37.0 33.0 37.0 6 35.89627691166136 37.0 35.0 37.0 35.0 37.0 7 35.86886120037404 37.0 35.0 37.0 35.0 37.0 8 35.37598487928704 37.0 35.0 37.0 33.0 37.0 9 37.807306670099386 39.0 37.0 39.0 35.0 39.0 10 37.66695865717855 39.0 37.0 39.0 35.0 39.0 11 38.15616311908661 39.0 39.0 39.0 37.0 39.0 12 38.21031584686929 39.0 39.0 39.0 37.0 39.0 13 38.10457289584991 39.0 39.0 39.0 37.0 39.0 14 38.510432904714285 40.0 39.0 40.0 36.0 40.0 15 36.936058264142574 39.0 35.0 40.0 32.0 40.0 16 36.5760318698748 39.0 35.0 40.0 31.0 40.0 17 36.616128760489815 39.0 35.0 40.0 31.0 40.0 18 36.840102228075985 39.0 35.0 40.0 32.0 40.0 19 37.03362129458546 39.0 35.0 40.0 32.0 40.0 20 37.03788655383693 39.0 35.0 40.0 32.0 40.0 21 37.07295157928667 39.0 35.0 40.0 32.0 40.0 22 37.0146900531182 39.0 35.0 40.0 32.0 40.0 23 36.886001252733486 39.0 35.0 40.0 32.0 40.0 24 36.86443738713494 39.0 35.0 40.0 32.0 40.0 25 36.76931389032355 39.0 35.0 40.0 31.0 40.0 26 36.89229317731202 39.0 35.0 40.0 32.0 40.0 27 36.89156477087379 39.0 35.0 40.0 32.0 40.0 28 36.699000691253524 39.0 35.0 40.0 32.0 40.0 29 36.790490005081054 39.0 35.0 40.0 32.0 40.0 30 36.788522470449045 39.0 35.0 40.0 32.0 40.0 31 36.77468431796406 39.0 35.0 40.0 32.0 40.0 32 36.66412927958405 39.0 35.0 40.0 32.0 40.0 33 36.55242878021748 39.0 35.0 40.0 31.0 40.0 34 36.49765858145986 39.0 35.0 40.0 31.0 40.0 35 36.330652567397216 39.0 35.0 40.0 31.0 40.0 36 35.842425593439316 38.0 35.0 40.0 30.0 40.0 37 35.90667030869886 38.0 35.0 40.0 30.0 40.0 38 35.8207251516336 38.0 35.0 40.0 30.0 40.0 39 35.69532045958679 38.0 35.0 40.0 30.0 40.0 40 35.48489995662005 37.0 35.0 40.0 29.0 40.0 41 35.31736909222871 37.0 35.0 40.0 29.0 40.0 42 34.96595955774426 37.0 34.0 40.0 28.0 40.0 43 34.726523675040724 36.0 34.0 40.0 27.0 40.0 44 34.56871012929737 36.0 34.0 40.0 26.0 40.0 45 34.174396827664374 35.0 34.0 40.0 24.0 40.0 46 34.15304436738267 35.0 33.0 40.0 24.0 40.0 47 34.08190438514281 35.0 33.0 39.0 25.0 40.0 48 33.91705219356564 35.0 33.0 39.0 24.0 40.0 49 33.77277957699052 35.0 33.0 39.0 24.0 40.0 50 33.51272173356546 35.0 33.0 39.0 23.0 40.0 51 33.422642660651036 35.0 33.0 39.0 23.0 40.0 52 32.88552297436815 35.0 33.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 4.0 14 7.0 15 20.0 16 50.0 17 164.0 18 410.0 19 791.0 20 1546.0 21 2791.0 22 4404.0 23 6634.0 24 9914.0 25 13468.0 26 18282.0 27 23738.0 28 30516.0 29 38235.0 30 46808.0 31 54746.0 32 64866.0 33 85218.0 34 145780.0 35 234062.0 36 170116.0 37 306250.0 38 457249.0 39 194950.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.750024201722535 20.087952984294784 34.77758747810725 16.38443533587543 2 22.139421806458433 22.07092439067912 35.36784786771051 20.421805935151944 3 19.557974506821225 23.766876449814 35.32875881531391 21.34639022805087 4 19.853994278451154 22.27003261607277 37.29519455830156 20.58077854717452 5 0.0 0.0 100.0 0.0 6 100.0 0.0 0.0 0.0 7 100.0 0.0 0.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 100.0 0.0 0.0 0.0 11 99.05799046687608 0.6175756310370216 0.24541854851411887 0.07901535357277602 12 98.55867622595461 1.0337929305852736 0.1322853071734952 0.27524553628662374 13 93.36569299866406 3.3617631622049156 1.802387310238872 1.4701565288921472 14 54.52075094936163 27.10456870960602 7.598241986875079 10.77643835415728 15 32.57264048903701 30.226146128169184 17.196618980115865 20.00459440267794 16 28.59126090189485 21.440005107217555 25.95790417792374 24.010829812963856 17 22.156637734488527 21.366065574370978 28.28085091686591 28.196445774274586 18 23.342914599054644 21.738955249576012 29.627879547111203 25.29025060425814 19 25.843096439023956 21.273758896422386 27.224399941183275 25.658744723370386 20 27.575416492021805 20.732163592132164 24.67126211590558 27.021157799940447 21 31.015828711458433 21.95412818592784 19.79659040900126 27.23345269361247 22 29.554149326459523 22.177621282026728 21.82650007509075 26.441729316423 23 28.87336141256428 23.309006023481686 20.544253569165384 27.27337899478865 24 29.69156278240794 24.076553842160813 21.283125617143924 24.948757758287325 25 31.788295366717584 22.09557090162798 21.127972952678174 24.988160778976265 26 30.424312448685807 22.80916850207298 20.423532760759823 26.34298628848139 27 29.898049262671627 24.481572939282195 19.711871298117604 25.908506499928574 28 30.218035280617013 23.482682817195624 20.70558094338053 25.593700958806835 29 30.978728124913328 22.31058685383363 19.96817408076625 26.742510940486785 30 30.168532946524394 22.27468981240918 20.12091965499071 27.43585758607572 31 30.22112263549171 22.7239784387508 19.38602453871517 27.66887438704232 32 30.10746611366385 24.57461220991292 20.064353034320398 25.253568642102834 33 30.70039523375201 24.638400101307102 20.024950013631457 24.63625465130943 34 27.914816216043675 26.07710747291631 19.778484904142864 26.22959140689715 35 30.207203374531204 25.79710008419583 19.76896119927515 24.226735341997813 36 31.798342352072527 24.230869257846983 20.20893543294396 23.761852957136526 37 30.457593087674073 25.507359678412744 19.589475992152884 24.445571241760295 38 30.015159435715255 26.514726944392553 21.302800963464033 22.167312656428162 39 31.102169991852524 26.185635845969244 20.576696959374072 22.135497202804157 40 30.788881964143776 26.423676139613328 20.229029403653858 22.55841249258904 41 31.952029831174016 25.700816474544236 20.01788572705376 22.329267967227988 42 32.79377882294334 25.942258091355352 18.252180378970195 23.01178270673111 43 31.053766546783105 25.793908073223687 19.16043832066733 23.99188705932588 44 29.821336343242695 26.23576611664655 21.030276485711042 22.912621054399715 45 28.671636784734446 24.002980605655303 21.00856034549071 26.316822264119548 46 29.095912603786147 22.829105488636703 21.51446792055137 26.560513987025786 47 28.491575969076216 23.11874123832234 22.867409620302446 25.522273172299 48 27.925020185544795 23.937884513043027 22.118752227212575 26.018343074199603 49 28.721400759070676 22.8882885117432 22.688813990008484 25.701496739177642 50 27.817486045417606 23.976345628854943 21.17182385750863 27.034344468218823 51 28.387076855775 24.80940816453613 22.19012768567169 24.613387294017176 52 29.515478898452713 24.495910824632485 22.14606746864634 23.842542808268462 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 1.5 8 3.0 9 51.5 10 100.0 11 347.0 12 594.0 13 1022.5 14 1755.5 15 2060.0 16 2068.0 17 2076.0 18 2300.0 19 2524.0 20 3048.5 21 3573.0 22 4700.0 23 5827.0 24 7360.5 25 8894.0 26 11054.0 27 13214.0 28 15034.5 29 16855.0 30 18426.0 31 19997.0 32 20203.5 33 20410.0 34 22141.0 35 23872.0 36 25720.5 37 27569.0 38 29043.5 39 33896.5 40 37275.0 41 39471.0 42 41667.0 43 43801.0 44 45935.0 45 49992.0 46 54049.0 47 59895.0 48 65741.0 49 75117.0 50 84493.0 51 90384.0 52 96275.0 53 107695.0 54 119115.0 55 131583.0 56 144051.0 57 153210.5 58 162370.0 59 165157.0 60 167944.0 61 175522.5 62 183101.0 63 163457.5 64 132929.5 65 122045.0 66 104879.5 67 87714.0 68 75111.0 69 62508.0 70 54221.0 71 45934.0 72 40226.0 73 34518.0 74 26275.5 75 18033.0 76 13509.5 77 8986.0 78 6259.5 79 3533.0 80 2392.5 81 1252.0 82 884.5 83 517.0 84 511.0 85 505.0 86 284.5 87 64.0 88 52.5 89 22.5 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1911021.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.886887739440981 #Duplication Level Percentage of deduplicated Percentage of total 1 78.55013104853893 10.122667207408986 2 7.197807640125589 1.8551467805677815 3 3.3478680897232502 1.2943080071616073 4 1.9399951158822852 1.0000199709375523 5 1.3291920336429208 0.8564574260857789 6 0.892834270908731 0.6903513011475871 7 0.6404502266761768 0.5777387121712793 8 0.4731556145135987 0.48780026300183665 9 0.3903000597827596 0.45267777496057743 >10 2.3309768464123577 5.907921622741512 >50 0.6288072484902232 6.040471526702413 >100 2.1584291530709487 60.30263878454451 >500 0.11165736186636958 9.000581161022767 >1k 0.00839529036589245 1.411219461545815 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TGCCTGGATGGGGGTGAATGGCCACCGGGGCCACCGTTATGCAATGTTCAGC 3098 0.16211229494600007 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0033489951183163346 0.0 0.0 0.0 0.0 12 0.010308625598567467 0.0 0.0 0.0 0.0 13 0.026373336556741133 0.0 0.0 0.0 0.0 14 0.09544636087201554 0.0 0.0 0.0 0.0 15 0.1604377973868419 0.0 0.0 0.0 0.0 16 0.19172997052361015 0.0 0.0 0.0 0.0 17 0.2129751583054294 0.0 0.0 0.0 0.0 18 0.23558087535406466 0.0 0.0 0.0 0.0 19 0.2606460106927135 0.0 0.0 0.0 0.0 20 0.2880135801752048 0.0 0.0 0.0 0.0 21 0.3172126313630253 0.0 0.0 0.0 0.0 22 0.35070258254618863 0.0 0.0 0.0 0.0 23 0.38393089348573356 0.0 0.0 0.0 0.0 24 0.42506073978255604 0.0 0.0 0.0 0.0 25 0.4684406921744973 0.0 0.0 0.0 0.0 26 0.5185186348030713 0.0 0.0 0.0 0.0 27 0.5661371591416317 0.0 0.0 0.0 0.0 28 0.6104590164105994 0.0 0.0 0.0 0.0 29 0.6623161126957788 0.0 0.0 0.0 0.0 30 0.7207665431201437 0.0 0.0 0.0 0.0 31 0.7745074491593761 0.0 0.0 0.0 0.0 32 0.8173117930153567 0.0 0.0 0.0 0.0 33 0.8580230149223896 0.0 0.0 0.0 0.0 34 0.8983679404883568 0.0 0.0 0.0 0.0 35 0.9331137648408887 0.0 0.0 0.0 0.0 36 0.9636733452955253 0.0 0.0 0.0 0.0 37 0.9970063123325176 0.0 0.0 0.0 0.0 38 1.0300776391258915 0.0 0.0 0.0 0.0 39 1.0679631464018449 0.0 0.0 0.0 0.0 40 1.1068952146522724 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATAAG 75 0.0 46.000004 33 ACAACGG 50 1.6370905E-11 46.0 38 AACGTTA 20 6.31251E-4 46.0 36 GATACCT 65 0.0 46.0 16 TCGTTAG 25 3.418012E-5 46.0 33 TCGCAAT 50 1.6370905E-11 46.0 26 CTCGTTA 25 3.418012E-5 46.0 32 GTATTCG 50 1.6370905E-11 46.0 30 CGAAATA 20 6.31251E-4 46.0 22 CGACGTA 20 6.31251E-4 46.0 36 ACGTTAT 30 1.8620558E-6 46.0 29 CCGATAT 55 1.8189894E-12 46.0 32 ATAATTC 20 6.31251E-4 46.0 13 GACGTTA 20 6.31251E-4 46.0 14 CTATACC 20 6.31251E-4 46.0 21 CCAATTG 25 3.418012E-5 46.0 29 ACCGATA 50 1.6370905E-11 46.0 31 TATATCG 20 6.31251E-4 46.0 17 CTAAGTA 30 1.8620558E-6 46.0 32 TACGGTA 25 3.418012E-5 46.0 32 >>END_MODULE