SRR1528045_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1528045_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1885040
Sequences flagged as poor quality	0
Sequence length	59
%GC	55

$Per base quality graph$

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGCCTGGATGGGGGTGAATGGCCACCGGGGCCACCGTTATGCAATGTTCAGCGTGTCAC	3115	0.1652484827908161	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACGTA	45	7.6397555E-11	53.000004	36
ATAGCGA	75	0.0	53.000004	29
TAATTCG	150	0.0	53.000004	43
TTACGCC	45	7.6397555E-11	53.000004	17
AACGTTA	30	7.0128954E-7	53.0	36
ACTATTA	20	3.1387602E-4	53.0	39
CGGCGTA	20	3.1387602E-4	53.0	33
GATACCT	80	0.0	53.0	16
GTATTCG	25	1.479097E-5	53.0	30
CAACGAA	15	0.0066969283	53.0	48
CATGCGG	15	0.0066969283	53.0	26
TCCGATT	25	1.479097E-5	53.0	50
CTATCGA	20	3.1387602E-4	53.0	28
ACCGATA	20	3.1387602E-4	53.0	31
TTCACGC	15	0.0066969283	53.0	52
TACGGTT	20	3.1387602E-4	53.0	25
CGCGATT	35	3.3436663E-8	53.0	22
TACGGTA	15	0.0066969283	53.0	32
CGATTAG	100	0.0	53.0	37
GAATACG	15	0.0066969283	53.0	48