##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528045_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1885040 Sequences flagged as poor quality 0 Sequence length 59 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.21917678139456 31.0 31.0 33.0 30.0 34.0 2 31.804510779612105 31.0 31.0 34.0 30.0 34.0 3 32.09004795654204 33.0 31.0 34.0 30.0 34.0 4 35.84382983915461 37.0 35.0 37.0 35.0 37.0 5 35.427109769553965 37.0 35.0 37.0 33.0 37.0 6 35.640792768323216 37.0 35.0 37.0 33.0 37.0 7 35.649377201544795 37.0 35.0 37.0 33.0 37.0 8 34.8906893222425 36.0 35.0 37.0 32.0 37.0 9 37.47524986207189 39.0 37.0 39.0 35.0 39.0 10 37.27284938250647 39.0 37.0 39.0 33.0 39.0 11 37.9081069897721 39.0 37.0 39.0 35.0 39.0 12 37.990838921190004 39.0 38.0 39.0 35.0 39.0 13 37.80394421338539 39.0 38.0 39.0 35.0 39.0 14 37.76865902049824 40.0 38.0 40.0 33.0 40.0 15 35.96447237193906 38.0 35.0 40.0 31.0 40.0 16 35.59976870517337 38.0 35.0 40.0 27.0 40.0 17 35.464898888087255 38.0 34.0 40.0 27.0 40.0 18 35.65420892925349 38.0 34.0 40.0 29.0 40.0 19 36.186705321902984 38.0 35.0 40.0 30.0 40.0 20 36.370097186266605 38.0 35.0 40.0 31.0 40.0 21 36.400279569664306 38.0 35.0 40.0 31.0 40.0 22 36.380896426601026 38.0 35.0 40.0 30.0 40.0 23 36.272649386750416 38.0 35.0 40.0 30.0 40.0 24 36.25543967236769 38.0 35.0 40.0 30.0 40.0 25 36.14719475448797 38.0 35.0 40.0 30.0 40.0 26 36.040310019946524 38.0 35.0 40.0 30.0 40.0 27 35.86110002970759 38.0 35.0 40.0 30.0 40.0 28 35.815140792768325 38.0 35.0 40.0 30.0 40.0 29 35.754200971862666 38.0 35.0 40.0 30.0 40.0 30 35.679673110384925 38.0 34.0 40.0 29.0 40.0 31 35.64282243347621 38.0 34.0 40.0 29.0 40.0 32 35.43827929380809 38.0 34.0 40.0 28.0 40.0 33 35.251207931927176 38.0 34.0 40.0 27.0 40.0 34 35.19769766158808 38.0 34.0 40.0 27.0 40.0 35 35.05283336162628 37.0 34.0 40.0 27.0 40.0 36 34.85036975342698 37.0 33.0 40.0 26.0 40.0 37 34.68997952298094 37.0 33.0 40.0 25.0 40.0 38 34.462659147816495 37.0 33.0 40.0 24.0 40.0 39 34.28562683019989 36.0 33.0 40.0 24.0 40.0 40 34.005112358358446 36.0 33.0 40.0 23.0 40.0 41 33.818939651147986 35.0 33.0 40.0 23.0 40.0 42 33.61953486398166 35.0 33.0 40.0 23.0 40.0 43 33.35167264355133 35.0 32.0 39.0 22.0 40.0 44 33.1720361371642 35.0 32.0 39.0 21.0 40.0 45 32.96799219114714 35.0 32.0 39.0 21.0 40.0 46 32.764203412129184 35.0 31.0 39.0 20.0 40.0 47 32.643341255357974 35.0 31.0 39.0 20.0 40.0 48 32.45716165174214 35.0 31.0 38.0 20.0 40.0 49 32.337366846326866 35.0 31.0 38.0 20.0 40.0 50 32.08324544837245 35.0 31.0 38.0 19.0 40.0 51 31.90917434112804 35.0 31.0 37.0 18.0 40.0 52 31.6931874124687 35.0 30.0 37.0 18.0 40.0 53 31.432723974027077 35.0 30.0 37.0 18.0 40.0 54 31.223743262742435 34.0 30.0 36.0 17.0 40.0 55 31.095865870220262 34.0 30.0 36.0 17.0 39.0 56 30.85586831048678 34.0 29.0 36.0 15.0 39.0 57 30.65650914569452 34.0 29.0 35.0 14.0 39.0 58 30.49083573823367 34.0 29.0 35.0 13.0 39.0 59 29.880588740822475 33.0 27.0 35.0 10.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 4.0 13 5.0 14 17.0 15 107.0 16 324.0 17 881.0 18 1987.0 19 3447.0 20 6095.0 21 9152.0 22 12952.0 23 17344.0 24 22942.0 25 28949.0 26 36192.0 27 43757.0 28 49396.0 29 54528.0 30 62875.0 31 75984.0 32 93940.0 33 121296.0 34 183200.0 35 204499.0 36 207753.0 37 273211.0 38 300200.0 39 74003.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.391864363620932 20.45314688282477 34.60642744981539 16.54856130373891 2 21.456414717990068 22.79628018503586 35.014588549845094 20.732716547128973 3 19.816661715401267 23.85127106056105 35.25161269787379 21.0804545261639 4 19.641811314348768 22.494164580061963 36.96139073971905 20.902633365870223 5 0.0 0.0 100.0 0.0 6 100.0 0.0 0.0 0.0 7 100.0 0.0 0.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 100.0 0.0 0.0 0.0 11 99.03174468446294 0.6387132368543904 0.24439799685948307 0.0851440818231974 12 98.58045452616389 1.0185460255485295 0.13113780078937318 0.2698616474981963 13 93.29616347663709 3.413985910113313 1.7781055043924798 1.5117451088571063 14 54.38415099944829 27.298306667232524 7.52875270551288 10.788789627806308 15 32.37899461019395 30.523384119169883 17.084412001867335 20.013209268768833 16 28.42072316767814 21.697205364342402 25.87133429529347 24.010737172685992 17 21.98377753257225 21.560444340703647 28.09558417858507 28.360193948139035 18 23.230594576242414 22.033113355684762 29.395185248058397 25.34110682001443 19 25.69881806221619 21.59015193311548 27.21279124050418 25.498238764164157 20 27.43161948818062 20.920564019861647 24.646691847387853 27.001124644569874 21 30.993665916903616 22.124623350167635 19.81209947799516 27.069611254933584 22 29.42728005771761 22.38037389127021 21.864469719475448 26.327876331536732 23 28.686446971947543 23.63965751389891 20.620305139413485 27.05359037474006 24 29.56388193353987 24.318529049781436 21.311431057165894 24.806157959512795 25 31.668664855918177 22.27586682510716 21.217109451258327 24.838358867716334 26 30.39224631838051 22.95197979883716 20.447948054152697 26.207825828629634 27 29.66021941178967 24.748599499214873 19.83125026524636 25.7599308237491 28 30.022015447948053 23.716791155625344 20.744281288460723 25.51691210796588 29 30.857594533802995 22.602119848915674 20.024827059372747 26.515458557908584 30 30.03543691380554 22.521644103042906 20.161004541017697 27.281914442133854 31 30.181799855705982 22.988530747358148 19.418951321987862 27.410718074948008 32 30.011564741331746 24.87957815218775 19.938568942834102 25.170288163646394 33 30.625981411535037 24.982334592369394 19.987002928319825 24.404681067775748 34 27.804290625132623 26.459279378686922 19.66382676229682 26.07260323388363 35 30.094056359546745 26.099499214870768 19.726477952722487 24.079966472859994 36 31.68054789288291 24.710669269617622 20.09702711878793 23.511755718711537 37 30.236546704579215 25.815685608793448 19.529877350082756 24.41789033654458 38 29.769607010991813 26.822295548105078 21.28060943003862 22.12748801086449 39 30.830645503543693 26.56818953443959 20.59049144845733 22.010673513559396 40 30.64147179900692 26.708133514408182 20.14684038534991 22.50355430123499 41 31.77025421211221 26.065759877774475 19.99230785553622 22.17167805457709 42 32.52567584772737 26.410845393201203 18.139827271569832 22.92365148750159 43 30.955682638034205 26.084910665025674 19.129673640877648 23.829733056062473 44 29.499374018588465 26.564900479565424 21.064274498153885 22.87145100369223 45 28.54623774561813 24.21248355472563 20.933030598820185 26.308248100836057 46 28.968563001315623 23.060253363323856 21.450791495140685 26.520392140219833 47 28.290805500148537 23.442897763442687 22.75564444255825 25.510652293850526 48 27.711825743750794 24.281341509994483 21.99184102194118 26.01499172431354 49 28.531383949412216 23.197438781139923 22.655911810889954 25.615265458557907 50 27.721268514195984 24.245002758562155 21.049049357042822 26.98467937019904 51 28.365658023171925 25.181640707889485 21.942027755379197 24.510673513559393 52 29.264259644357683 24.869127445571447 22.067807579680007 23.798805330390866 53 27.84858676738955 24.886527606841234 22.168601196791577 25.096284428977633 54 26.78516105759029 25.559351525697068 21.39933370114162 26.256153715571024 55 27.87786996562407 25.524020710435853 21.367344990026737 25.230764333913342 56 27.89664940797012 22.73781988711115 22.282285787039 27.08324491787973 57 26.93014471841446 23.60708526079022 22.424245639349827 27.038524381445487 58 28.380299622289186 23.72750710860247 20.87292577345839 27.019267495649963 59 27.577504986631585 23.615732292152952 21.913911641132284 26.89285108008318 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.5 5 1.0 6 1.0 7 1.0 8 38.5 9 256.5 10 437.0 11 681.5 12 926.0 13 1156.0 14 1253.0 15 1120.0 16 1093.0 17 1066.0 18 1142.0 19 1548.0 20 1878.0 21 2305.0 22 2732.0 23 3673.5 24 4615.0 25 5937.0 26 9162.0 27 11065.0 28 13326.0 29 15587.0 30 17762.0 31 21326.0 32 22715.0 33 24163.5 34 25612.0 35 25778.0 36 27747.5 37 29551.0 38 32137.0 39 34723.0 40 34952.0 41 35181.0 42 35774.5 43 42472.5 44 48577.0 45 50081.0 46 51585.0 47 51203.0 48 56405.5 49 61990.0 50 66064.5 51 70139.0 52 78281.0 53 95928.5 54 105434.0 55 115813.0 56 126192.0 57 131530.0 58 147177.0 59 157486.0 60 151746.5 61 146007.0 62 139633.0 63 133259.0 64 125795.0 65 103538.5 66 88746.0 67 78630.0 68 68514.0 69 60890.0 70 44378.5 71 35491.0 72 32816.0 73 30141.0 74 25999.0 75 14517.0 76 7177.0 77 5445.0 78 3713.0 79 2785.0 80 1857.0 81 1244.0 82 494.5 83 358.0 84 419.0 85 480.0 86 308.5 87 128.0 88 119.0 89 79.5 90 40.0 91 21.5 92 1.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 1885040.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.46501052972896 #Duplication Level Percentage of deduplicated Percentage of total 1 84.78372262764834 15.655323310691463 2 5.68882706127041 2.100885031763304 3 2.5084339576744172 1.389547783247634 4 1.3311001249401562 0.9831511129257408 5 0.8568426187053217 0.7910803988357152 6 0.5740331188494716 0.6359716550381189 7 0.37789607033645434 0.4884498442534078 8 0.2888755641248096 0.4267272266676802 9 0.2235878941263967 0.37156975374274553 >10 1.4159854303653923 5.286709275798394 >50 0.4464479232213985 6.1364909256158136 >100 1.4312760860829177 56.57667769169622 >500 0.06722573346915764 7.805327828993404 >1k 0.005745789185398089 1.352088160730366 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TGCCTGGATGGGGGTGAATGGCCACCGGGGCCACCGTTATGCAATGTTCAGCGTGTCAC 3115 0.1652484827908161 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.003660399779315028 0.0 0.0 0.0 0.0 12 0.011246445698765014 0.0 0.0 0.0 0.0 13 0.02604719263251708 0.0 0.0 0.0 0.0 14 0.08578067308916522 0.0 0.0 0.0 0.0 15 0.14249034503246616 0.0 0.0 0.0 0.0 16 0.1720918388999703 0.0 0.0 0.0 0.0 17 0.19156092178415313 0.0 0.0 0.0 0.0 18 0.21415991172601112 0.0 0.0 0.0 0.0 19 0.23829733056062471 0.0 0.0 0.0 0.0 20 0.26476891737045366 0.0 0.0 0.0 0.0 21 0.2909752578194627 0.0 0.0 0.0 0.0 22 0.32370665874464205 0.0 0.0 0.0 0.0 23 0.3548996307770657 0.0 0.0 0.0 0.0 24 0.3913444807537241 0.0 0.0 0.0 0.0 25 0.429274710350974 0.0 0.0 0.0 0.0 26 0.47203242371514664 0.0 0.0 0.0 0.0 27 0.5131456096422357 0.0 0.0 0.0 0.0 28 0.5551075839239485 0.0 0.0 0.0 0.0 29 0.6025336332385519 0.0 0.0 0.0 0.0 30 0.6528243432500106 0.0 0.0 0.0 0.0 31 0.7003564911089419 0.0 0.0 0.0 0.0 32 0.7377562279845521 0.0 0.0 0.0 0.0 33 0.7709650723592072 0.0 0.0 0.0 0.0 34 0.8080465136018334 0.0 0.0 0.0 0.0 35 0.8381254509188134 0.0 0.0 0.0 0.0 36 0.865923269532742 0.0 0.0 0.0 0.0 37 0.8965857488435258 0.0 0.0 0.0 0.0 38 0.9282561643254255 0.0 0.0 0.0 0.0 39 0.9617302550609006 0.0 0.0 0.0 0.0 40 0.9982281543097229 0.0 0.0 0.0 0.0 41 1.0371132708059245 0.0 0.0 0.0 0.0 42 1.0778551118278656 0.0 0.0 0.0 0.0 43 1.118331706488987 0.0 0.0 0.0 0.0 44 1.1605058778593558 0.0 0.0 0.0 0.0 45 1.1995501421720494 0.0 0.0 0.0 0.0 46 1.2353584008827398 0.0 0.0 0.0 0.0 47 1.2696282307006748 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGTA 45 7.6397555E-11 53.000004 36 ATAGCGA 75 0.0 53.000004 29 TAATTCG 150 0.0 53.000004 43 TTACGCC 45 7.6397555E-11 53.000004 17 AACGTTA 30 7.0128954E-7 53.0 36 ACTATTA 20 3.1387602E-4 53.0 39 CGGCGTA 20 3.1387602E-4 53.0 33 GATACCT 80 0.0 53.0 16 GTATTCG 25 1.479097E-5 53.0 30 CAACGAA 15 0.0066969283 53.0 48 CATGCGG 15 0.0066969283 53.0 26 TCCGATT 25 1.479097E-5 53.0 50 CTATCGA 20 3.1387602E-4 53.0 28 ACCGATA 20 3.1387602E-4 53.0 31 TTCACGC 15 0.0066969283 53.0 52 TACGGTT 20 3.1387602E-4 53.0 25 CGCGATT 35 3.3436663E-8 53.0 22 TACGGTA 15 0.0066969283 53.0 32 CGATTAG 100 0.0 53.0 37 GAATACG 15 0.0066969283 53.0 48 >>END_MODULE