##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528044_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4042782 Sequences flagged as poor quality 0 Sequence length 52 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.831739381445747 31.0 31.0 34.0 30.0 34.0 2 32.34483605596344 34.0 31.0 34.0 30.0 34.0 3 32.44991567687795 34.0 31.0 34.0 30.0 34.0 4 35.952283353393774 37.0 35.0 37.0 35.0 37.0 5 35.84456495551825 37.0 35.0 37.0 35.0 37.0 6 36.0848603758501 37.0 35.0 37.0 35.0 37.0 7 36.07205780573872 37.0 36.0 37.0 35.0 37.0 8 36.143545954246356 37.0 36.0 37.0 35.0 37.0 9 38.08757113294756 39.0 39.0 39.0 35.0 39.0 10 37.78432846490362 39.0 38.0 39.0 35.0 39.0 11 38.01341205140421 39.0 37.0 39.0 35.0 39.0 12 38.001978340657494 39.0 38.0 39.0 35.0 39.0 13 38.044675671357 39.0 38.0 39.0 37.0 39.0 14 38.75637469445545 40.0 39.0 40.0 36.0 40.0 15 38.228777361727644 40.0 38.0 40.0 34.0 40.0 16 37.60068314343935 40.0 36.0 40.0 33.0 40.0 17 37.52600437025791 40.0 37.0 40.0 33.0 40.0 18 37.5368847491653 40.0 37.0 40.0 33.0 40.0 19 37.67854264711775 40.0 37.0 40.0 33.0 40.0 20 37.712475715979735 40.0 37.0 40.0 33.0 40.0 21 37.48792786749323 40.0 37.0 40.0 33.0 40.0 22 37.58201208969467 40.0 37.0 40.0 33.0 40.0 23 37.50761579526178 40.0 36.0 40.0 33.0 40.0 24 37.487403723475566 40.0 36.0 40.0 33.0 40.0 25 37.593311734345306 40.0 37.0 40.0 33.0 40.0 26 37.584038911818645 40.0 37.0 40.0 33.0 40.0 27 37.56570871246582 40.0 36.0 40.0 33.0 40.0 28 37.536698738640865 40.0 36.0 40.0 33.0 40.0 29 37.55816539204934 40.0 36.0 40.0 33.0 40.0 30 37.523684927854134 40.0 36.0 40.0 33.0 40.0 31 37.49309609076126 40.0 36.0 40.0 33.0 40.0 32 37.44123502083466 40.0 36.0 40.0 33.0 40.0 33 37.357781102221196 40.0 35.0 40.0 33.0 40.0 34 37.253584289234496 40.0 35.0 40.0 33.0 40.0 35 37.16190410464873 40.0 35.0 40.0 33.0 40.0 36 37.09019531599775 39.0 35.0 40.0 33.0 40.0 37 36.946640951701085 39.0 35.0 40.0 32.0 40.0 38 36.73970820093688 39.0 35.0 40.0 32.0 40.0 39 36.61771275324764 39.0 35.0 40.0 31.0 40.0 40 36.49360316732389 39.0 35.0 40.0 31.0 40.0 41 36.34446527168667 38.0 35.0 40.0 31.0 40.0 42 36.19046389342784 38.0 35.0 40.0 31.0 40.0 43 36.012131497567765 38.0 35.0 40.0 31.0 40.0 44 35.84301255917336 38.0 35.0 40.0 30.0 40.0 45 35.68419568505054 37.0 35.0 40.0 30.0 40.0 46 35.530733539429036 37.0 35.0 40.0 30.0 40.0 47 35.38257022020974 37.0 35.0 40.0 30.0 40.0 48 35.227099061982564 36.0 34.0 40.0 29.0 40.0 49 35.057314987550654 36.0 34.0 40.0 29.0 40.0 50 34.902176768373856 36.0 34.0 40.0 29.0 40.0 51 34.72489092906815 35.0 34.0 39.0 28.0 40.0 52 34.10375281180138 35.0 33.0 39.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 7.0 14 7.0 15 13.0 16 70.0 17 184.0 18 429.0 19 924.0 20 1832.0 21 3177.0 22 5233.0 23 7934.0 24 11925.0 25 16703.0 26 23244.0 27 31626.0 28 41978.0 29 55124.0 30 70811.0 31 88073.0 32 109103.0 33 139966.0 34 212240.0 35 404994.0 36 343103.0 37 673882.0 38 1233446.0 39 566751.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.16863140283102 18.607632071182667 35.18799678043486 16.035739745551457 2 24.441115053940578 22.184203847746428 36.175138802933226 17.199542295379764 3 22.047342646721983 22.25920170813069 36.41420685062909 19.27924879451823 4 22.61623307910246 22.437568980964098 35.797750163130246 19.148447776803202 5 0.0 0.0 100.0 0.0 6 0.0 0.0 100.0 0.0 7 0.0 0.0 0.0 100.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 100.0 0.0 0.0 11 99.6147702250579 0.30753575137120925 0.04667577920352866 0.031018244367368806 12 99.4182718731804 0.4955498466155237 0.05721307752928553 0.028965202674791763 13 98.48413790305784 0.9222114870403598 0.2529693661444025 0.3406812437573928 14 67.02273335539735 21.788090478289455 3.7843989609135495 7.404777205399649 15 36.350587293601286 23.805785224135263 17.06827130426523 22.775356177998223 16 30.96501369601428 15.333995253763375 28.44815772900938 25.252833321212965 17 23.262693857843438 15.503136206701226 30.19309475504739 31.041075180407944 18 23.60241041935974 17.477642870676675 32.54506426515207 26.37488244481152 19 25.70959799464824 16.694098271932546 30.055639903413045 27.540663830006167 20 29.01722130948441 17.17265486983963 25.908421478081184 27.901702342594774 21 33.086498356824585 17.30372797741753 21.81638782402811 27.79338584172978 22 31.944735085888876 18.62210230479902 21.881293624044037 27.55186898526806 23 29.816596591159257 20.102370100589148 21.00805831232058 29.072974995931023 24 30.140630882397318 21.336421305922507 21.25207344843229 27.27087436324788 25 31.785488309782718 19.97001075002313 21.685685748081397 26.558815192112757 26 30.60595401879201 19.37739902868866 22.129241695446353 27.887405257072977 27 31.21991242664086 21.122756557242017 20.717194248910776 26.940136767206347 28 31.52185796810216 19.842524281546716 19.21461508436517 29.421002665985945 29 30.33079696110253 20.238761328214085 19.678206739814318 29.75223497086907 30 29.92026282891336 18.813406213839876 20.221842285831883 31.044488671414882 31 28.399156818250404 18.121358015346857 21.0027896631577 32.47669550324504 32 30.861545341796813 21.415945752207264 19.12702688396258 28.59548202203334 33 32.85136324441931 20.64758871489979 19.46879648717146 27.03225155350944 34 29.65287270003676 20.59601531816457 20.825238659912902 28.92587332188577 35 32.07175158096578 21.89390869950445 19.18641668039484 26.84792303913493 36 34.95657198434148 20.65676556391119 19.658368915266763 24.72829353648057 37 34.152966942071075 20.500041802897115 20.572764002610082 24.774227252421724 38 31.807923355748592 22.742903277990255 22.138220660921117 23.310952705340036 39 31.273390452416184 24.686490639366653 22.169214169846406 21.870904738370754 40 31.72087933507174 24.155544375135733 19.866641337573977 24.256934952218547 41 31.56675279547599 24.762997361717748 18.915217293438033 24.755032549368234 42 32.93796202713874 23.923278574011658 18.825576051342864 24.313183347506744 43 32.499377903631704 22.718860428289233 18.062413456872026 26.719348211207034 44 30.559352445914715 24.03218872548656 18.69875743980259 26.70970138879613 45 29.237218331337182 23.604809757241423 20.537887029278355 26.62008488214304 46 28.990803857343778 21.9431817001263 20.890045518160512 28.175968924369403 47 29.70924477253535 19.667248938973213 22.797791223964094 27.825715064527344 48 29.500428170502392 18.66229739817779 21.895986476639106 29.94128795468071 49 30.285630043865837 19.844923619428403 21.96633407391247 27.903112262793293 50 29.94603715955993 21.466925498332586 20.24447521533439 28.342562126773096 51 28.079005991418782 21.247324243553077 22.652866268821818 28.020803496206327 52 30.193193696815708 20.703812374745905 22.27809958587923 26.82489434255916 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 4.0 4 8.0 5 8.0 6 8.0 7 86.5 8 165.0 9 274.0 10 383.0 11 561.0 12 739.0 13 1097.5 14 1694.0 15 1932.0 16 2544.5 17 3157.0 18 3940.5 19 4724.0 20 6940.0 21 9156.0 22 12053.0 23 14950.0 24 18567.0 25 22184.0 26 22694.0 27 23204.0 28 23621.0 29 24038.0 30 24966.0 31 25894.0 32 27613.5 33 29333.0 34 32597.5 35 35862.0 36 40410.0 37 44958.0 38 52430.5 39 67661.5 40 75420.0 41 87791.0 42 100162.0 43 117289.5 44 134417.0 45 142865.5 46 151314.0 47 171120.0 48 190926.0 49 210266.5 50 229607.0 51 260678.5 52 291750.0 53 316211.5 54 340673.0 55 374060.5 56 407448.0 57 405726.0 58 404004.0 59 378096.0 60 352188.0 61 320919.5 62 289651.0 63 254047.5 64 200559.0 65 182674.0 66 162672.5 67 142671.0 68 121221.5 69 99772.0 70 78385.5 71 56999.0 72 49331.0 73 41663.0 74 29339.5 75 17016.0 76 12826.5 77 8637.0 78 5568.5 79 2500.0 80 2238.0 81 1976.0 82 1245.5 83 515.0 84 391.5 85 268.0 86 148.0 87 28.0 88 16.0 89 2.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 4042782.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.690918442583279 #Duplication Level Percentage of deduplicated Percentage of total 1 73.66304264524648 5.665364532171247 2 8.21582373652125 1.263744605924495 3 3.887258180997107 0.8968975690594014 4 2.338290892654618 0.7193441820176768 5 1.4904136871372873 0.5731325056741354 6 0.9932048209025232 0.45831943646051027 7 0.6772404036889208 0.36460204975555666 8 0.49000142104372163 0.30148487727977386 9 0.3636178232297645 0.2516899520456804 >10 2.6452997780182104 4.434720422513335 >50 1.144342062572217 6.596547140534716 >100 3.8214842146534873 64.37385046420235 >500 0.25282330975332085 12.391656808827035 >1k 0.017157023581211274 1.7086454535340967 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTCGTTCATAGGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCC 4889 0.12093157632541156 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.02028306250497801 0.0 0.0 0.0 0.0 11 0.02149509916686084 0.0 0.0 0.0 0.0 12 0.028544700159444658 0.0 0.0 0.0 0.0 13 0.034011232858957026 0.0 0.0 0.0 0.0 14 0.04976770946343384 0.0 0.0 0.0 0.0 15 0.07094124788326454 0.0 0.0 0.0 0.0 16 0.08293793729169666 0.0 0.0 0.0 0.0 17 0.09194163820854055 0.0 0.0 0.0 0.0 18 0.10492774530014233 0.0 0.0 0.0 0.0 19 0.11848276755956666 0.0 0.0 0.0 0.0 20 0.13146887465116844 0.0 0.0 0.0 0.0 21 0.14598857915168317 0.0 0.0 0.0 0.0 22 0.1656779910467594 0.0 0.0 0.0 0.0 23 0.18403168906955655 0.0 0.0 0.0 0.0 24 0.19963975302155793 0.0 0.0 0.0 0.0 25 0.2196012547795058 0.0 0.0 0.0 0.0 26 0.24589502970973948 0.0 0.0 0.0 0.0 27 0.2701110275053169 0.0 0.0 0.0 0.0 28 0.2913340368093061 0.0 0.0 0.0 0.0 29 0.3190377319380565 0.0 0.0 0.0 0.0 30 0.35854023293860515 0.0 0.0 0.0 0.0 31 0.39146310634607556 0.0 0.0 0.0 0.0 32 0.41545648516293976 0.0 0.0 0.0 0.0 33 0.4356158704575216 0.0 0.0 0.0 0.0 34 0.4559731392887373 0.0 0.0 0.0 0.0 35 0.47482154615311933 0.0 0.0 0.0 0.0 36 0.49305156696552027 0.0 0.0 0.0 0.0 37 0.5106632017259402 0.0 0.0 0.0 0.0 38 0.5319109464720086 0.0 0.0 0.0 0.0 39 0.5559537961730313 0.0 0.0 0.0 0.0 40 0.5856115912260419 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGATTA 20 6.3133484E-4 46.000004 30 ACGTTAG 20 6.3133484E-4 46.000004 42 ACCGATT 20 6.3133484E-4 46.000004 28 TCGATAG 20 6.3133484E-4 46.000004 30 CGGATTA 20 6.3133484E-4 46.000004 15 GCGATAA 20 6.3133484E-4 46.000004 31 ATACGGT 20 6.3133484E-4 46.000004 19 TATACGC 20 6.3133484E-4 46.000004 36 TACGTTG 40 5.6170393E-9 46.000004 21 TACGTTA 20 6.3133484E-4 46.000004 28 CTTAACC 50 1.6370905E-11 46.0 35 ACGTTAC 45 3.110472E-10 46.0 28 CTATACG 30 1.862576E-6 46.0 35 GCACGAC 25 3.4186927E-5 46.0 28 CGATTAT 25 3.4186927E-5 46.0 40 TACGGGT 55 1.8189894E-12 46.0 18 CTACGGG 55 1.8189894E-12 46.0 17 AACGATA 50 1.6370905E-11 46.0 18 CGAATAC 30 1.862576E-6 46.0 30 ACTCGAT 50 1.6370905E-11 46.0 25 >>END_MODULE