##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528042_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4064759 Sequences flagged as poor quality 0 Sequence length 59 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.404950945431207 31.0 31.0 33.0 30.0 34.0 2 31.911250826924796 31.0 31.0 34.0 30.0 34.0 3 32.11347314810054 33.0 31.0 34.0 30.0 34.0 4 35.72892833252845 37.0 35.0 37.0 35.0 37.0 5 35.49790061354191 37.0 35.0 37.0 33.0 37.0 6 35.81452110690941 37.0 35.0 37.0 35.0 37.0 7 35.7814918424438 37.0 35.0 37.0 33.0 37.0 8 35.84490593415256 37.0 35.0 37.0 35.0 37.0 9 37.836679616183886 39.0 38.0 39.0 35.0 39.0 10 37.466824724417854 39.0 37.0 39.0 35.0 39.0 11 37.49998979029261 39.0 37.0 39.0 35.0 39.0 12 37.65545189764018 39.0 37.0 39.0 35.0 39.0 13 37.741949522714634 39.0 37.0 39.0 35.0 39.0 14 38.244685355269525 40.0 38.0 40.0 35.0 40.0 15 37.71824356622373 40.0 38.0 40.0 33.0 40.0 16 37.115268826515916 39.0 36.0 40.0 32.0 40.0 17 36.98585918623958 39.0 36.0 40.0 32.0 40.0 18 36.940708907957394 39.0 36.0 40.0 32.0 40.0 19 37.0704949543134 40.0 36.0 40.0 32.0 40.0 20 37.17783046916188 40.0 36.0 40.0 32.0 40.0 21 37.10358400092109 40.0 36.0 40.0 32.0 40.0 22 37.08960998671754 39.0 36.0 40.0 32.0 40.0 23 37.012054097180176 39.0 35.0 40.0 31.0 40.0 24 36.975003930122305 39.0 35.0 40.0 31.0 40.0 25 36.91399785325526 39.0 35.0 40.0 31.0 40.0 26 36.77248097611691 39.0 35.0 40.0 31.0 40.0 27 36.667949563553464 39.0 35.0 40.0 31.0 40.0 28 36.649410703069975 39.0 35.0 40.0 31.0 40.0 29 36.638737991600486 39.0 35.0 40.0 31.0 40.0 30 36.60804244482883 39.0 35.0 40.0 31.0 40.0 31 36.60699293611257 39.0 35.0 40.0 31.0 40.0 32 36.49213003772179 39.0 35.0 40.0 30.0 40.0 33 36.33538642758402 39.0 35.0 40.0 30.0 40.0 34 36.2386094722959 39.0 35.0 40.0 30.0 40.0 35 36.08891252839344 38.0 35.0 40.0 30.0 40.0 36 35.926433276856024 38.0 35.0 40.0 30.0 40.0 37 35.75752141762894 38.0 35.0 40.0 29.0 40.0 38 35.511821488063624 38.0 34.0 40.0 28.0 40.0 39 35.36690588544118 38.0 34.0 40.0 28.0 40.0 40 35.20744206483091 38.0 34.0 40.0 27.0 40.0 41 35.081335449407945 37.0 34.0 40.0 27.0 40.0 42 34.963168788112654 37.0 34.0 40.0 27.0 40.0 43 34.74152169907244 37.0 33.0 40.0 26.0 40.0 44 34.58213266764401 36.0 33.0 40.0 26.0 40.0 45 34.373486103358154 36.0 33.0 40.0 25.0 40.0 46 34.162718134088635 36.0 33.0 39.0 25.0 40.0 47 34.0326110354882 35.0 33.0 39.0 24.0 40.0 48 33.84493250399347 35.0 33.0 39.0 24.0 40.0 49 33.691745070248935 35.0 33.0 39.0 24.0 40.0 50 33.48934733891972 35.0 33.0 39.0 24.0 40.0 51 33.30570840731271 35.0 32.0 38.0 23.0 40.0 52 33.143757354372056 35.0 32.0 38.0 23.0 40.0 53 32.89952786868791 35.0 32.0 38.0 23.0 40.0 54 32.69670674202333 35.0 31.0 37.0 23.0 40.0 55 32.55581647029996 35.0 31.0 37.0 22.0 40.0 56 32.350684259509606 35.0 31.0 37.0 22.0 40.0 57 32.19203131108142 35.0 31.0 37.0 21.0 39.0 58 31.99546049347575 35.0 31.0 36.0 21.0 39.0 59 31.47256282598796 34.0 30.0 36.0 20.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 3.0 13 6.0 14 20.0 15 88.0 16 363.0 17 956.0 18 2182.0 19 4177.0 20 7001.0 21 10855.0 22 15742.0 23 21877.0 24 29905.0 25 38899.0 26 49406.0 27 62267.0 28 76941.0 29 91535.0 30 109499.0 31 132932.0 32 162679.0 33 208375.0 34 301303.0 35 429416.0 36 480294.0 37 734478.0 38 915783.0 39 177776.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.360742174382295 18.855435217684494 34.637871519566104 16.14595108836711 2 24.103692248421122 22.66252439566528 35.97590902683283 17.257874329080764 3 22.09151883297386 22.37862072511556 36.27041603204519 19.25944440986538 4 22.676916392829195 22.57233454677141 35.63736497046934 19.113384089930054 5 0.0 0.0 100.0 0.0 6 0.0 0.0 100.0 0.0 7 0.0 0.0 0.0 100.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 100.0 0.0 0.0 11 99.59458851065955 0.32366002510849967 0.04391404262835755 0.03783742160359323 12 99.41125660832536 0.5002018569858632 0.05173738467643469 0.03680415001233776 13 98.4734150290337 0.9361440616774575 0.2424497983767303 0.34799111091211066 14 66.59610077743847 22.05156566477865 3.873587585389441 7.478745972393443 15 36.34412273888808 23.911011698356532 17.1717191597337 22.573146403021678 16 30.97029860810936 15.492456010307128 28.313683541877882 25.223561839705628 17 23.307433478836014 15.564145377376617 30.059666514054094 31.068754629733274 18 23.465278015252565 17.62862201670505 32.50797894782938 26.398121020213004 19 25.66809003928646 16.83536465507549 30.094108900429273 27.402436405208768 20 29.045018413145772 17.30105032057251 25.915878407551347 27.738052858730374 21 32.81269566043153 17.51565098939445 21.846166033459795 27.825487316714227 22 31.85527112431512 18.803894646644487 21.88594698972313 27.454887239317266 23 29.719720160531043 20.314168687491684 21.075050205928566 28.891060946048707 24 30.108525499297745 21.487030350384856 21.24996832530539 27.154475825012014 25 31.64605822879044 20.16614023119206 21.73540915955903 26.452392380458473 26 30.509508681818527 19.508831888926256 22.219226281312128 27.76243314794309 27 31.171958780336055 21.253756987806657 20.773039680827328 26.801244551029964 28 31.486048742373164 19.934638191341726 19.283504876918904 29.295808189366205 29 30.27662894651319 20.353334601141174 19.726286355476425 29.64375009686921 30 29.79276262135098 19.02781936149228 20.333800847725534 30.8456171694312 31 28.27318913618249 18.267749699305664 21.01332452920333 32.44573663530851 32 30.619945733560094 21.654051322599937 19.24175578429127 28.484247159548698 33 32.749346271205745 20.821013004707044 19.468140669594433 26.961500054492777 34 29.579613453097714 20.746592848432098 20.894301482572523 28.779492215897672 35 32.064016587453274 21.98430460452883 19.259690426910918 26.691988381106974 36 34.82831331451631 20.77813223366994 19.75583300264542 24.637721449168325 37 34.09646180745279 20.671410039315987 20.602746681906602 24.62938147132462 38 31.67617071516417 22.8813319559659 22.221071409153655 23.221425919716275 39 31.10826496724652 24.884328935614633 22.17804302788923 21.829363069249617 40 31.51478353329189 24.491365908778356 19.819600620848615 24.17424993708114 41 31.45930668952329 24.98160407541997 18.94646152453319 24.61262771052355 42 32.79702437463082 24.133878539908515 18.871327918826182 24.19776916663448 43 32.41928980291328 22.904801982110133 18.046900197527087 26.629008017449497 44 30.463232875553015 24.214695139367425 18.597510947143483 26.724561037936073 45 29.10128251146009 23.749968940348 20.553912298367504 26.594836249824404 46 28.88941263184361 22.12180353127947 20.871471100746685 28.117312736130234 47 29.54903353433746 19.881818331664928 22.718985307616023 27.850162826381585 48 29.402604188833827 18.79939253471116 21.862476963578896 29.935526312876114 49 30.166979149317342 20.03552978171646 21.879771961880152 27.917719107086054 50 29.792172180441696 21.621060436793424 20.27190295906842 28.314864423696463 51 27.977624257674314 21.378733646939462 22.6340848252012 28.00955727018502 52 30.06958100098924 20.822292293343835 22.353428579652572 26.754698126014357 53 29.70208073836604 20.743665245590208 21.815807530040527 27.738446486003227 54 27.20729568468881 21.40291712251575 22.804746849690225 28.585040343105213 55 27.087411578398623 21.335188629879408 22.88630150028575 28.69109829143622 56 27.16003581024115 22.342800643285372 22.65595574054944 27.84120780592404 57 27.999126147454252 20.62700396259655 23.178545148679174 28.19532474127002 58 28.571484803896123 20.350997439208573 23.084369823647602 27.993147933247702 59 27.200431809118324 20.60427198758893 22.396653774553425 29.79864242873932 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 2.5 4 5.0 5 5.0 6 47.0 7 89.0 8 173.0 9 383.5 10 510.0 11 712.5 12 915.0 13 1015.0 14 1300.0 15 1485.0 16 1648.5 17 1812.0 18 2281.0 19 3772.0 20 4794.0 21 6617.0 22 8440.0 23 10527.5 24 12615.0 25 15035.0 26 18824.0 27 20193.0 28 21268.5 29 22344.0 30 24897.0 31 27590.0 32 27730.0 33 31917.5 34 36105.0 35 38052.0 36 44825.0 37 49651.0 38 54541.5 39 59432.0 40 66077.5 41 72723.0 42 81776.0 43 95276.5 44 99724.0 45 111528.5 46 123333.0 47 136804.0 48 164880.0 49 179485.0 50 198533.0 51 217581.0 52 241292.5 53 299328.0 54 333652.0 55 351995.0 56 370338.0 57 365017.5 58 340134.0 59 320571.0 60 291661.0 61 262751.0 62 235694.0 63 208637.0 64 195516.5 65 164550.5 66 146705.0 67 137218.0 68 127731.0 69 107809.0 70 71936.5 71 55986.0 72 48603.0 73 41220.0 74 29336.0 75 12460.0 76 7468.0 77 5830.5 78 4193.0 79 2945.0 80 1697.0 81 1206.5 82 692.0 83 668.0 84 643.0 85 618.0 86 414.0 87 134.0 88 58.0 89 30.5 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 4064759.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.75775667661035 #Duplication Level Percentage of deduplicated Percentage of total 1 80.21379678265515 9.431343046775293 2 7.0584588918032845 1.6598328432335954 3 3.0608978992602704 1.0796787813435011 4 1.7655800019331025 0.8303704022327462 5 1.0775618027847504 0.6334854740576342 6 0.7115255409086718 0.5019566507518636 7 0.469691362821849 0.3865761730015367 8 0.3308376031164135 0.3111926429532621 9 0.24061218133675016 0.25461535334273594 >10 1.7132151535103137 4.379965361332978 >50 0.7598548196018429 6.727081179079115 >100 2.443004424081481 61.535759519783994 >500 0.1462838845691339 10.938563199631341 >1k 0.008679651616981898 1.3295793724804366 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTCGTTCATAGGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACC 4645 0.11427491765194442 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.018869507392689208 0.0 0.0 0.0 0.0 11 0.020099592620374297 0.0 0.0 0.0 0.0 12 0.026004001713262705 0.0 0.0 0.0 0.0 13 0.031662393760614096 0.0 0.0 0.0 0.0 14 0.046103594333637 0.0 0.0 0.0 0.0 15 0.06507150854454102 0.0 0.0 0.0 0.0 16 0.07518280911611241 0.0 0.0 0.0 0.0 17 0.0835227869598173 0.0 0.0 0.0 0.0 18 0.09528240173648671 0.0 0.0 0.0 0.0 19 0.10785387276342828 0.0 0.0 0.0 0.0 20 0.12121259833608831 0.0 0.0 0.0 0.0 21 0.13663786709125927 0.0 0.0 0.0 0.0 22 0.1556795864158244 0.0 0.0 0.0 0.0 23 0.17159688926206942 0.0 0.0 0.0 0.0 24 0.1886704722223384 0.0 0.0 0.0 0.0 25 0.20822882734253126 0.0 0.0 0.0 0.0 26 0.23287973530534037 0.0 0.0 0.0 0.0 27 0.2550212694036719 0.0 0.0 0.0 0.0 28 0.2751946671377073 0.0 0.0 0.0 0.0 29 0.30348662737446425 0.0 0.0 0.0 0.0 30 0.3389376836363484 0.0 0.0 0.0 0.0 31 0.36973901773758294 0.0 0.0 0.0 0.0 32 0.3931352387681533 0.0 0.0 0.0 0.0 33 0.41247217854736284 0.0 0.0 0.0 0.0 34 0.4300869990078133 0.0 0.0 0.0 0.0 35 0.4479478365138007 0.0 0.0 0.0 0.0 36 0.4653166399287141 0.0 0.0 0.0 0.0 37 0.48253783311630527 0.0 0.0 0.0 0.0 38 0.5030802564186462 0.0 0.0 0.0 0.0 39 0.5259106382444814 0.0 0.0 0.0 0.0 40 0.5544486155267754 0.0 0.0 0.0 0.0 41 0.5781400570119901 0.0 0.0 0.0 0.0 42 0.5995681416782643 0.0 0.0 0.0 0.0 43 0.6176257928206814 0.0 0.0 0.0 0.0 44 0.6357572490767596 0.0 0.0 0.0 0.0 45 0.6540855189692673 0.0 0.0 0.0 0.0 46 0.6723645854526676 0.0 0.0 0.0 0.0 47 0.6895857786402588 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACGGTA 90 0.0 53.000004 52 CTATACG 45 7.6397555E-11 53.000004 35 CGCGATA 30 7.0149144E-7 53.000004 33 TACGATA 15 0.0066974815 53.000004 39 GCGATAA 45 7.6397555E-11 53.000004 31 ACTCGAT 30 7.0149144E-7 53.000004 25 TTTATCG 45 7.6397555E-11 53.000004 28 CGTAATC 45 7.6397555E-11 53.000004 25 CGTAACT 60 0.0 53.000004 52 TTACGCG 15 0.0066974815 53.000004 24 TCGACTA 30 7.0149144E-7 53.000004 43 CGATAAC 30 7.0149144E-7 53.000004 39 ATTACCG 35 3.3449396E-8 53.0 16 CGTTAGT 20 3.1391933E-4 53.0 43 CTACGTA 65 0.0 53.0 27 TCGTAAT 50 3.6379788E-12 53.0 33 TTAGTCG 70 0.0 53.0 25 CGTAAGA 80 0.0 53.0 25 CACGTAA 25 1.4794023E-5 53.0 50 TAATCGT 20 3.1391933E-4 53.0 52 >>END_MODULE