##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528037_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2397696 Sequences flagged as poor quality 0 Sequence length 52 %GC 60 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.724829169335894 31.0 31.0 34.0 30.0 34.0 2 32.187156753817 34.0 31.0 34.0 30.0 34.0 3 32.43871741872197 34.0 31.0 34.0 30.0 34.0 4 36.03703847360132 37.0 35.0 37.0 35.0 37.0 5 35.99376985239163 37.0 35.0 37.0 35.0 37.0 6 35.277966848174245 36.0 35.0 37.0 33.0 37.0 7 36.0008041052744 37.0 35.0 37.0 35.0 37.0 8 35.727280689461885 37.0 35.0 37.0 33.0 37.0 9 37.30454861667201 39.0 37.0 39.0 33.0 39.0 10 37.845882880899 39.0 38.0 39.0 35.0 39.0 11 38.04335578822336 39.0 37.0 39.0 37.0 39.0 12 37.99051506112535 39.0 38.0 39.0 35.0 39.0 13 38.04278273809524 39.0 39.0 39.0 37.0 39.0 14 38.72063264066838 40.0 39.0 40.0 36.0 40.0 15 38.121531253336535 40.0 38.0 40.0 34.0 40.0 16 37.515385186445656 40.0 37.0 40.0 33.0 40.0 17 37.514192374679695 40.0 37.0 40.0 33.0 40.0 18 37.59616314995729 40.0 37.0 40.0 33.0 40.0 19 37.695860943172114 40.0 37.0 40.0 33.0 40.0 20 37.720148008755075 40.0 37.0 40.0 33.0 40.0 21 37.72851937860346 40.0 37.0 40.0 33.0 40.0 22 37.64770179372197 40.0 37.0 40.0 33.0 40.0 23 37.558529938741195 40.0 37.0 40.0 33.0 40.0 24 37.483829893364295 40.0 37.0 40.0 33.0 40.0 25 37.39595845344864 40.0 36.0 40.0 33.0 40.0 26 37.36518891469144 40.0 36.0 40.0 33.0 40.0 27 37.337941507180226 40.0 36.0 40.0 33.0 40.0 28 37.117769725603246 40.0 35.0 40.0 32.0 40.0 29 37.19262742232543 40.0 35.0 40.0 32.0 40.0 30 37.20848514573991 40.0 35.0 40.0 33.0 40.0 31 37.14926245862695 40.0 35.0 40.0 33.0 40.0 32 37.008849328688875 39.0 35.0 40.0 32.0 40.0 33 36.83277196108264 39.0 35.0 40.0 32.0 40.0 34 36.726685117713004 39.0 35.0 40.0 32.0 40.0 35 36.51391502509075 39.0 35.0 40.0 31.0 40.0 36 36.001590276665596 38.0 35.0 40.0 30.0 40.0 37 36.00617092408712 38.0 35.0 40.0 31.0 40.0 38 35.870473988362164 37.0 35.0 40.0 30.0 40.0 39 35.7090440155883 37.0 35.0 40.0 30.0 40.0 40 35.50088334801409 37.0 35.0 40.0 30.0 40.0 41 35.29718112721546 36.0 35.0 40.0 30.0 40.0 42 34.97024852191437 36.0 34.0 40.0 29.0 40.0 43 34.71422315422806 35.0 34.0 39.0 28.0 40.0 44 34.54238151959214 35.0 34.0 39.0 28.0 40.0 45 34.109601884475765 35.0 33.0 39.0 26.0 40.0 46 34.0922005959054 35.0 33.0 39.0 26.0 40.0 47 33.98591064088191 35.0 33.0 38.0 27.0 40.0 48 33.802494561445656 35.0 33.0 38.0 26.0 40.0 49 33.66099622304078 35.0 33.0 37.0 26.0 40.0 50 33.432198243647235 35.0 33.0 37.0 26.0 40.0 51 33.36668660247171 35.0 33.0 37.0 26.0 40.0 52 32.883366782110826 35.0 33.0 36.0 24.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 1.0 13 4.0 14 7.0 15 17.0 16 61.0 17 159.0 18 405.0 19 852.0 20 1553.0 21 2645.0 22 4243.0 23 6658.0 24 9681.0 25 13687.0 26 18740.0 27 24883.0 28 32755.0 29 41692.0 30 50773.0 31 61549.0 32 73943.0 33 93239.0 34 137136.0 35 241360.0 36 313687.0 37 532119.0 38 563899.0 39 171946.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.44701580183643 21.167570868033312 33.60104867339312 17.784364656737132 2 26.167245555733505 23.316175194853724 33.66402579809951 16.85255345131326 3 17.985390975336323 24.78149857196242 35.257597293401666 21.975513159299595 4 21.54063734518471 25.28118660580824 36.2356612347854 16.942514814221653 5 100.0 0.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 0.0 0.0 100.0 0.0 8 100.0 0.0 0.0 0.0 9 0.0 0.0 0.0 100.0 10 0.0 0.0 0.0 100.0 11 98.65554265428145 1.0332836189408499 0.11523562620115312 0.19593810057655348 12 98.87617112427931 0.8184940876574845 0.14113549007046766 0.1641992979927397 13 97.04829135970532 1.63957399103139 0.5130758861840701 0.7990587630792227 14 62.97637398569294 22.417604233397395 5.3878389920990815 9.21818278881059 15 36.15433315983344 24.730491271620757 17.66024550234892 21.45493006619688 16 28.074409766709373 17.992773062139655 26.90099161862054 27.03182555253043 17 23.343743326927182 17.29827300875507 30.282612975122785 29.075370689194962 18 24.06973194266496 18.488415545590435 29.6407467835789 27.801105728165705 19 25.80685791693359 16.951815409459748 27.812867019004912 29.428459654601753 20 29.28619808349349 17.049450806107195 24.699711723254325 28.96463938714499 21 30.667399036408284 18.432320027226137 21.742456091180866 29.15782484518471 22 30.94099502188768 18.731357102818706 21.950238896006834 28.377408979286784 23 30.72032484518471 18.276837430600043 21.40646687486654 29.59637084934871 24 29.884480768204142 20.505810578155028 22.17020005872304 27.43950859491779 25 31.627362267777066 18.007578942451417 23.297657417787743 27.067401371983774 26 30.90229119955157 18.205852618513774 21.44049954623105 29.451356635703608 27 30.880311765961988 20.494341234251547 19.770980140935297 28.854366858851165 28 30.62594257153534 20.129532684710654 20.876708306641042 28.367816437112964 29 29.938490951313263 20.03148022101217 20.580382166880202 29.449646660794365 30 30.863754204035875 19.96587557388426 19.66646313794576 29.503907084134102 31 31.339377469036943 19.771647448216957 19.80196822282725 29.08700685991886 32 31.412739563314112 21.057089806213966 19.798923633354686 27.731246997117232 33 30.392802090006406 20.73715767136451 21.14300561872731 27.727034619901776 34 30.43659413036515 21.371349829169336 20.87587417253897 27.31618186792654 35 31.663688807922274 21.87474975976938 19.366675341661328 27.09488609064702 36 32.68045657164211 20.766435778347216 21.11255972400171 25.440547926008968 37 32.50061725923553 21.15409960228486 20.4925895526372 25.852693585842406 38 31.488937713538327 22.622634395686525 20.881879938073887 25.006547952701258 39 32.08342508808456 22.68723808189195 21.954784926863123 23.27455190316037 40 32.18710795697203 22.67977258167841 19.63009489109545 25.503024570254112 41 32.107364736814006 23.14759669282511 19.195469317211188 25.54956925314969 42 32.855040839205635 22.35733804452274 19.451173126201155 25.336447990070464 43 31.658517176489433 21.414015788490286 19.944813687806963 26.982653347213326 44 31.33516509182148 22.55498612000854 20.324511531069827 25.78533725710015 45 29.184183482810166 21.29665312032885 21.231548953662184 28.287614443198805 46 29.05368320254111 19.790749119154388 21.275924887892376 29.87964279041213 47 30.19073310377963 18.850304625774076 24.058012358530856 26.90094991191544 48 29.494856729126628 19.724894231795858 23.8176149103139 26.962634128763614 49 30.89807882233611 19.718179452274185 22.849643991565234 26.534097733824467 50 29.492354326820415 20.620295483664318 21.99490677717275 27.892443412342516 51 28.74463651772368 22.184505458573565 22.11769131699765 26.953166706705105 52 30.440889920990816 21.797008461456333 21.956828555413196 25.805273062139655 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 1.5 8 3.0 9 19.5 10 36.0 11 55.5 12 75.0 13 114.5 14 277.5 15 401.0 16 593.0 17 785.0 18 910.5 19 1036.0 20 1297.0 21 1558.0 22 1932.0 23 2306.0 24 3033.5 25 3761.0 26 4684.5 27 5608.0 28 7096.0 29 8584.0 30 10249.0 31 11914.0 32 12225.0 33 12536.0 34 13332.5 35 14129.0 36 14334.0 37 14539.0 38 16314.5 39 19027.0 40 19964.0 41 22398.0 42 24832.0 43 26232.5 44 27633.0 45 32516.5 46 37400.0 47 44174.5 48 50949.0 49 60342.5 50 69736.0 51 80808.5 52 91881.0 53 105463.0 54 119045.0 55 130918.0 56 142791.0 57 163349.5 58 183908.0 59 203842.0 60 223776.0 61 239653.0 62 255530.0 63 260080.5 64 242880.5 65 221130.0 66 193731.5 67 166333.0 68 146229.5 69 126126.0 70 114414.0 71 102702.0 72 87448.5 73 72195.0 74 60420.5 75 48646.0 76 40223.5 77 31801.0 78 22116.0 79 12431.0 80 8763.5 81 5096.0 82 3605.5 83 2115.0 84 1713.0 85 1311.0 86 751.5 87 192.0 88 108.0 89 13.0 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2397696.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.754275851204971 #Duplication Level Percentage of deduplicated Percentage of total 1 77.68809883867169 7.577911464280803 2 7.663665264442362 1.49507010041337 3 3.5606084975860623 1.0419347245079684 4 2.1233582035855094 0.8284728659476843 5 1.3612762424511333 0.6639131989280067 6 0.8699258764013599 0.5091298181112063 7 0.6167479014569198 0.42111504130238037 8 0.4148354116278589 0.3237135230293039 9 0.2883339798825582 0.25312402593452316 >10 1.8183226296109356 3.5544687174180742 >50 0.5652907459676197 4.164829376822906 >100 2.798760637224069 63.785553460812835 >500 0.2149511467885299 13.463983436051333 >1k 0.015824624303450052 1.916780246439602 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0062560057655349135 0.0 0.0 0.0 0.0 12 0.015640014413837285 0.0 0.0 0.0 0.0 13 0.01726657591287636 0.0 0.0 0.0 0.0 14 0.025149143177450352 0.0 0.0 0.0 0.0 15 0.0361597133247918 0.0 0.0 0.0 0.0 16 0.04863001815075806 0.0 0.0 0.0 0.0 17 0.06276859118086696 0.0 0.0 0.0 0.0 18 0.07653180386504378 0.0 0.0 0.0 0.0 19 0.0944656870595772 0.0 0.0 0.0 0.0 20 0.11164884956224642 0.0 0.0 0.0 0.0 21 0.12995809310271195 0.0 0.0 0.0 0.0 22 0.14814221652786674 0.0 0.0 0.0 0.0 23 0.16645146006833225 0.0 0.0 0.0 0.0 24 0.18546971759555841 0.0 0.0 0.0 0.0 25 0.20865864563314115 0.0 0.0 0.0 0.0 26 0.23359925528507366 0.0 0.0 0.0 0.0 27 0.2627105354473628 0.0 0.0 0.0 0.0 28 0.2885269859064702 0.0 0.0 0.0 0.0 29 0.31763826606875933 0.0 0.0 0.0 0.0 30 0.3523382447149263 0.0 0.0 0.0 0.0 31 0.3841187540038437 0.0 0.0 0.0 0.0 32 0.40768304238735853 0.0 0.0 0.0 0.0 33 0.42799420777279523 0.0 0.0 0.0 0.0 34 0.44788830610719627 0.0 0.0 0.0 0.0 35 0.46644778987828317 0.0 0.0 0.0 0.0 36 0.4834224188554346 0.0 0.0 0.0 0.0 37 0.5006472880632074 0.0 0.0 0.0 0.0 38 0.5187897047832586 0.0 0.0 0.0 0.0 39 0.5390591634635917 0.0 0.0 0.0 0.0 40 0.5616641976297245 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGATAC 20 6.312832E-4 46.000004 25 AAACTAG 20 6.312832E-4 46.000004 44 ATTAGCG 20 6.312832E-4 46.000004 20 AGATAGT 55 1.8189894E-12 46.000004 18 CATGATA 20 6.312832E-4 46.000004 35 ATAATCG 55 1.8189894E-12 46.000004 26 ATTACTA 35 1.0201984E-7 46.000004 42 CTATACT 70 0.0 46.000004 26 CACGCAT 20 6.312832E-4 46.000004 19 CGCGCAT 40 5.6152203E-9 46.000004 31 TAAGTCC 40 5.6152203E-9 46.000004 40 CGACAAT 80 0.0 46.000004 31 CCTAAAT 70 0.0 46.000004 45 TCGATAA 20 6.312832E-4 46.000004 30 TCTAGAT 70 0.0 46.000004 37 GTAATAT 20 6.312832E-4 46.000004 23 ACGATTA 35 1.0201984E-7 46.000004 41 AATGCGC 35 1.0201984E-7 46.000004 44 TACGCTT 35 1.0201984E-7 46.000004 29 TAATTCG 80 0.0 46.000004 34 >>END_MODULE