##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528035_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5185709 Sequences flagged as poor quality 0 Sequence length 52 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.064806953109017 31.0 31.0 34.0 27.0 34.0 2 31.84677331489291 33.0 31.0 34.0 30.0 34.0 3 32.01990065389323 33.0 31.0 34.0 30.0 34.0 4 35.68677764217005 37.0 35.0 37.0 33.0 37.0 5 35.62617705698488 37.0 35.0 37.0 33.0 37.0 6 35.724778810380606 37.0 35.0 37.0 33.0 37.0 7 35.66655167114082 37.0 35.0 37.0 33.0 37.0 8 35.55826021089884 37.0 35.0 37.0 33.0 37.0 9 37.904929489873034 39.0 38.0 39.0 35.0 39.0 10 38.04754335424529 39.0 38.0 39.0 35.0 39.0 11 38.30742199379101 39.0 39.0 39.0 37.0 39.0 12 38.26066965963574 39.0 39.0 39.0 37.0 39.0 13 38.17238259994921 39.0 39.0 39.0 37.0 39.0 14 38.679415485905594 40.0 39.0 40.0 36.0 40.0 15 37.756222341053075 40.0 37.0 40.0 33.0 40.0 16 36.44177180015308 38.0 35.0 40.0 31.0 40.0 17 36.06664527454202 38.0 35.0 40.0 31.0 40.0 18 35.94005043476215 38.0 35.0 40.0 29.0 40.0 19 36.25412976316257 39.0 35.0 40.0 30.0 40.0 20 36.33610042522633 39.0 35.0 40.0 31.0 40.0 21 36.36465447636957 39.0 35.0 40.0 31.0 40.0 22 36.548763534552364 39.0 35.0 40.0 31.0 40.0 23 36.55209615502914 39.0 35.0 40.0 31.0 40.0 24 36.744795745384096 39.0 35.0 40.0 32.0 40.0 25 36.70439027720221 39.0 35.0 40.0 31.0 40.0 26 36.59912135447631 39.0 35.0 40.0 31.0 40.0 27 36.494010751471016 39.0 35.0 40.0 31.0 40.0 28 36.20004111298957 38.0 35.0 40.0 30.0 40.0 29 35.941738342818695 38.0 35.0 40.0 30.0 40.0 30 35.69419090041497 38.0 35.0 40.0 30.0 40.0 31 35.4084772207619 37.0 35.0 40.0 29.0 40.0 32 35.10377134544187 37.0 34.0 40.0 27.0 40.0 33 34.68781395176629 35.0 34.0 40.0 25.0 40.0 34 34.31277227472656 35.0 33.0 40.0 23.0 40.0 35 33.986248360638825 35.0 33.0 40.0 22.0 40.0 36 33.6526449902993 35.0 33.0 40.0 21.0 40.0 37 33.41292752832833 35.0 33.0 40.0 20.0 40.0 38 33.074416246650166 35.0 33.0 40.0 18.0 40.0 39 32.64962225994555 35.0 33.0 40.0 16.0 40.0 40 32.0924801218117 35.0 31.0 40.0 15.0 40.0 41 31.444675935344616 35.0 30.0 39.0 10.0 40.0 42 30.710633782188705 35.0 27.0 39.0 10.0 40.0 43 29.93022593439007 35.0 23.0 38.0 9.0 40.0 44 29.187143551633923 35.0 21.0 37.0 8.0 40.0 45 28.50253012654586 35.0 20.0 37.0 8.0 40.0 46 27.897148104531126 34.0 18.0 35.0 8.0 40.0 47 27.363308276650308 33.0 15.0 35.0 8.0 40.0 48 26.885350682037885 33.0 14.0 35.0 8.0 40.0 49 26.47640062332846 33.0 10.0 35.0 8.0 40.0 50 26.071007262459194 33.0 10.0 35.0 8.0 40.0 51 25.638023267406638 33.0 10.0 35.0 8.0 39.0 52 24.938565970439143 32.0 10.0 35.0 8.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 6.0 13 12.0 14 44.0 15 174.0 16 734.0 17 2493.0 18 6220.0 19 12318.0 20 20676.0 21 31162.0 22 43125.0 23 57125.0 24 75736.0 25 100316.0 26 132376.0 27 168124.0 28 207603.0 29 251669.0 30 291782.0 31 303184.0 32 267165.0 33 243130.0 34 282195.0 35 375459.0 36 522516.0 37 783362.0 38 834496.0 39 172507.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.68938827843984 23.539076334595713 36.41266796883512 2.358867418129324 2 29.94761179233158 21.21707947746393 31.249748105803853 17.585560624400635 3 17.96965467981331 22.640394977813063 35.3516751518452 24.03827519052843 4 14.10593999779008 25.948563639031807 32.90358174745247 27.04191461572564 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 100.0 0.0 0.0 0.0 8 0.0 0.0 0.0 100.0 9 0.0 0.0 100.0 0.0 10 0.0 0.0 100.0 0.0 11 99.48732179148502 0.30692042303183614 0.15023982255849683 0.055517962924645406 12 99.28572929950369 0.45951286506820954 0.14306626152759438 0.11169157390050231 13 96.69136852839216 2.135754243055289 0.5560088311935745 0.6168683973589725 14 59.056283335605606 27.730557190926064 5.560801811285593 7.652357662182741 15 43.06423673214213 34.495533783326444 13.58223147500178 8.85799800952965 16 45.92868593282037 31.124905003346697 14.642703630303977 8.303705433528954 17 30.89471468607282 33.461461103968624 19.283689077038453 16.36013513292011 18 24.11058931382382 44.42202599490253 17.94506787789288 13.522316813380774 19 26.7972807575589 44.3367338969464 17.92383645129335 10.942148894201353 20 19.088170971413938 48.25264973410579 20.272425622031626 12.386753672448647 21 20.778258093541307 49.46401736001769 16.11035250917473 13.647372037266264 22 22.881191366503597 50.00432920551462 16.893003444659158 10.221475983322629 23 17.083797027561708 47.11207281395852 20.891993746660294 14.912136411819482 24 18.787170664609217 50.008359512652945 16.84072515445815 14.36374466827969 25 18.386241881293376 43.84709978905488 22.686598881657265 15.08005944799448 26 19.484683772267207 44.34957688524366 21.992711122047147 14.173028220441989 27 24.528912054262975 46.21086528380208 18.38764959622686 10.872573065708083 28 27.280088412211327 44.396783544930884 17.672935369107677 10.650192673750109 29 31.367919025151625 41.95173697559967 16.825182438891193 9.855161560357512 30 35.303716425275695 43.03101080295867 12.886492473835304 8.778780297930332 31 31.90045951286507 45.78907146544474 11.934549354774825 10.375919666915363 32 30.005135266942283 50.516872427666115 12.465489289892664 7.012503015498941 33 28.430307215464655 53.10943980851992 11.727634543318956 6.732618432696475 34 25.114290061397583 55.20278904967479 12.891544820582876 6.791376068344753 35 25.512037023288425 55.468268659116816 11.965229826818282 7.054464490776478 36 20.28245318046192 57.64987969822448 13.409680334935878 8.657986786377716 37 19.06589822143896 59.16245975236944 13.996890299860636 7.774751726330961 38 18.27146490479894 60.30089617446718 13.443484777105697 7.98415414362819 39 19.235479661508194 60.67912796495138 11.794279239347985 8.29111313419245 40 19.52953781247656 61.08771240345341 11.412113560556522 7.970636223513507 41 20.215017850018192 60.84998213359061 11.349402752834761 7.58559726355644 42 21.850647616362583 57.814620912974476 11.95072843462678 8.384003036036153 43 23.326010001718185 56.7207107070605 10.323294268922533 9.629985022298783 44 21.80340238914293 55.69699341015857 11.489769287092662 11.009834913605834 45 21.977824054531407 54.80808892284546 13.735826672881183 9.478260349741955 46 23.233505775198722 54.40428685836402 12.725723714925 9.636483651512261 47 25.86865171184885 53.71340736628299 10.54715951087884 9.870781410989316 48 25.841384466424937 53.412792734802515 10.546098903737175 10.199723895035376 49 24.955603949238185 53.87855354012344 10.655167885432832 10.51067462520554 50 23.871374193962676 54.23707732153886 11.00410763504084 10.887440849457615 51 22.574926591522974 54.43716567975565 11.524981444195962 11.462926284525414 52 22.798926819842762 53.92047644786856 11.769191059506038 11.511405672782642 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 1.0 4 2.0 5 10.5 6 19.0 7 38.5 8 58.0 9 459.0 10 860.0 11 2023.5 12 3187.0 13 5673.5 14 11833.0 15 15506.0 16 19053.5 17 22601.0 18 28317.5 19 34034.0 20 44788.0 21 55542.0 22 73378.0 23 91214.0 24 118583.0 25 145952.0 26 180186.5 27 214421.0 28 249018.5 29 283616.0 30 307826.0 31 332036.0 32 345297.0 33 358558.0 34 359361.5 35 360165.0 36 354440.5 37 348716.0 38 338863.5 39 317788.0 40 306565.0 41 301107.0 42 295649.0 43 297539.0 44 299429.0 45 304588.0 46 309747.0 47 314054.5 48 318362.0 49 308912.0 50 299462.0 51 280757.0 52 262052.0 53 228481.0 54 194910.0 55 163081.5 56 131253.0 57 103707.0 58 76161.0 59 58399.0 60 40637.0 61 31787.0 62 22937.0 63 17176.5 64 8572.0 65 5728.0 66 4714.5 67 3701.0 68 2746.0 69 1791.0 70 1417.0 71 1043.0 72 780.0 73 517.0 74 443.0 75 369.0 76 253.0 77 137.0 78 134.0 79 131.0 80 81.0 81 31.0 82 23.5 83 16.0 84 9.5 85 3.0 86 3.5 87 4.0 88 2.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 5185709.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.38391123611164 #Duplication Level Percentage of deduplicated Percentage of total 1 82.45095307083982 41.54201500854 2 6.786710644926515 6.83882053438303 3 2.512134915044166 3.797135477181663 4 1.4740797557479812 2.9707961427422167 5 1.0000273077019222 2.519264355247067 6 0.7815855272254094 2.3627601496292727 7 0.6151641728897446 2.169606395775905 8 0.5242495210497755 2.1130993067316743 9 0.47088804586877087 2.13526633546784 >10 3.2925328557863156 29.04862891345316 >50 0.07483032955002354 2.467271350730926 >100 0.015228883164578608 1.3922154992519946 >500 0.001307357883322274 0.44111419455089007 >1k 3.0761232160486424E-4 0.2020063363144429 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.012958690894533418 0.0 0.0 0.0 0.0 12 0.01961159023770906 0.0 0.0 0.0 0.0 13 0.033013807755120854 0.0 0.0 0.0 0.0 14 0.16904149461529755 0.0 0.0 0.0 0.0 15 0.3628433450469357 0.0 0.0 0.0 0.0 16 0.5050418370949855 0.0 0.0 0.0 0.0 17 0.6272430635810841 0.0 0.0 0.0 0.0 18 0.7796619517215486 0.0 0.0 0.0 0.0 19 0.9488384327003309 0.0 0.0 0.0 0.0 20 1.1330948188569778 0.0 0.0 0.0 0.0 21 1.302599123861366 0.0 0.0 0.0 0.0 22 1.4705221600363614 0.0 0.0 0.0 0.0 23 1.641781287766051 0.0 0.0 0.0 0.0 24 1.8386492570254136 0.0 0.0 0.0 0.0 25 2.0551481002886973 0.0 0.0 0.0 0.0 26 2.310484448703157 0.0 0.0 0.0 0.0 27 2.5920660029322895 0.0 0.0 0.0 0.0 28 2.8862205727317134 0.0 0.0 0.0 0.0 29 3.201837974325208 0.0 0.0 0.0 0.0 30 3.54759590250822 0.0 0.0 0.0 0.0 31 3.8943565865342618 0.0 0.0 0.0 0.0 32 4.228872079015618 0.0 0.0 0.0 0.0 33 4.544778737102294 0.0 0.0 0.0 0.0 34 4.854514590001097 0.0 0.0 0.0 0.0 35 5.153952911742637 0.0 0.0 0.0 0.0 36 5.442843013366157 0.0 0.0 0.0 0.0 37 5.7255430260355915 0.0 0.0 0.0 0.0 38 5.998022642612611 0.0 0.0 0.0 0.0 39 6.275342484508869 0.0 0.0 0.0 0.0 40 6.554783540688457 0.0 0.0 0.0 1.92837662121033E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTCAA 140 0.0 46.000004 17 ATGAGTC 20 6.3135143E-4 46.000004 24 CTACGGT 55 1.8189894E-12 46.000004 44 CGTAACG 75 0.0 46.000004 17 CCTATAA 40 5.6188583E-9 46.000004 28 GATTCGC 40 5.6188583E-9 46.000004 45 GCGTAAC 20 6.3135143E-4 46.000004 16 CTAATTG 75 0.0 46.000004 38 CGACGTT 30 1.8626779E-6 46.0 30 ACTTATA 50 1.6370905E-11 46.0 27 CCGTACT 65 0.0 46.0 15 TGCACGA 30 1.8626779E-6 46.0 36 ATTCTAC 65 0.0 46.0 32 CTTAGGT 145 0.0 45.999996 8 CCGCAAT 145 0.0 44.41379 33 CTAGCAC 125 0.0 44.16 16 CCAGTAC 110 0.0 43.909092 43 TCATTAC 80 0.0 43.125004 21 GTCTAGG 160 0.0 43.125004 31 TCTAGGA 160 0.0 43.125004 32 >>END_MODULE