##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528033_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5415120 Sequences flagged as poor quality 0 Sequence length 59 %GC 39 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.777361166511547 31.0 31.0 34.0 27.0 34.0 2 31.545237039991726 31.0 31.0 34.0 28.0 34.0 3 31.743198304008036 31.0 31.0 34.0 30.0 34.0 4 35.50224593360812 37.0 35.0 37.0 33.0 37.0 5 35.28098287757243 37.0 35.0 37.0 33.0 37.0 6 35.41129540988935 37.0 35.0 37.0 33.0 37.0 7 35.36977167634328 37.0 35.0 37.0 32.0 37.0 8 35.26594350633042 37.0 35.0 37.0 32.0 37.0 9 37.652663652883035 39.0 37.0 39.0 35.0 39.0 10 37.80347582325045 39.0 37.0 39.0 35.0 39.0 11 38.114163859711326 39.0 38.0 39.0 35.0 39.0 12 38.102321093530705 39.0 39.0 39.0 37.0 39.0 13 38.00806814992096 39.0 38.0 39.0 35.0 39.0 14 38.18251673093117 40.0 38.0 40.0 33.0 40.0 15 37.21164018525905 40.0 36.0 40.0 31.0 40.0 16 35.9923820709421 38.0 35.0 40.0 31.0 40.0 17 35.49955901254266 38.0 34.0 40.0 27.0 40.0 18 35.33154907001138 38.0 34.0 40.0 27.0 40.0 19 35.58393959875312 38.0 34.0 40.0 27.0 40.0 20 35.74313902554329 38.0 34.0 40.0 28.0 40.0 21 35.92150866462793 38.0 34.0 40.0 30.0 40.0 22 35.99072171992495 38.0 35.0 40.0 30.0 40.0 23 35.97690171224276 38.0 35.0 40.0 30.0 40.0 24 36.12971273028114 38.0 35.0 40.0 30.0 40.0 25 36.05522499963067 38.0 35.0 40.0 30.0 40.0 26 35.821952976111334 38.0 35.0 40.0 29.0 40.0 27 35.62101689343911 38.0 35.0 40.0 27.0 40.0 28 35.36913438668026 38.0 34.0 40.0 27.0 40.0 29 35.0887804887057 37.0 34.0 40.0 27.0 40.0 30 34.85611473060615 37.0 33.0 40.0 25.0 40.0 31 34.633322807250806 36.0 33.0 40.0 25.0 40.0 32 34.24544239093501 35.0 33.0 40.0 24.0 40.0 33 33.74878857716911 35.0 33.0 40.0 22.0 40.0 34 33.405478918288054 35.0 33.0 40.0 21.0 40.0 35 33.06384105984724 35.0 32.0 40.0 20.0 40.0 36 32.62560737342847 35.0 31.0 39.0 18.0 40.0 37 32.44589593582414 35.0 31.0 39.0 18.0 40.0 38 32.139180664509745 35.0 31.0 39.0 16.0 40.0 39 31.737007674806836 35.0 30.0 39.0 15.0 40.0 40 31.169819505384922 35.0 28.0 39.0 12.0 40.0 41 30.556091093087502 35.0 25.0 38.0 10.0 40.0 42 29.917646331013902 35.0 24.0 38.0 9.0 40.0 43 29.10458789463576 34.0 22.0 37.0 8.0 40.0 44 28.40446989171062 34.0 20.0 37.0 8.0 40.0 45 27.707341111554314 33.0 20.0 35.0 8.0 40.0 46 27.06319656812776 33.0 16.0 35.0 8.0 40.0 47 26.557278693731625 33.0 15.0 35.0 8.0 40.0 48 26.04342470711637 33.0 12.0 35.0 8.0 39.0 49 25.70238702004757 32.0 10.0 35.0 8.0 39.0 50 25.267729616333526 31.0 10.0 35.0 8.0 39.0 51 24.850332771942266 31.0 10.0 35.0 8.0 38.0 52 24.444424500288083 30.0 10.0 35.0 8.0 38.0 53 24.021716785592933 29.0 10.0 35.0 8.0 38.0 54 23.55215544623203 27.0 9.0 35.0 8.0 37.0 55 23.095842197402828 26.0 9.0 35.0 8.0 37.0 56 22.525893978342122 24.0 9.0 35.0 8.0 36.0 57 21.952907599462247 23.0 8.0 35.0 8.0 35.0 58 21.33910273456544 20.0 8.0 34.0 8.0 35.0 59 20.634489909734224 20.0 8.0 33.0 8.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 8.0 13 31.0 14 176.0 15 872.0 16 3455.0 17 9943.0 18 20804.0 19 36057.0 20 54357.0 21 75177.0 22 101183.0 23 132128.0 24 170102.0 25 211840.0 26 259976.0 27 305834.0 28 322993.0 29 282296.0 30 233255.0 31 233004.0 32 263645.0 33 309013.0 34 371350.0 35 430234.0 36 528990.0 37 570137.0 38 435576.0 39 52681.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.95476369868073 23.941500834699877 35.70419492088818 2.399540545731212 2 29.515670936193473 21.746997296458805 30.950098982109353 17.78723278523837 3 17.89812598797441 22.899732600570253 34.98070218203844 24.22143922941689 4 14.076640960865133 26.214986925497495 32.71438121408205 26.99399089955532 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 100.0 0.0 0.0 0.0 8 0.0 0.0 0.0 100.0 9 0.0 0.0 100.0 0.0 10 0.0 0.0 100.0 0.0 11 99.46736175744951 0.3215995213402473 0.15456721180694058 0.05647150940330038 12 99.27828007504912 0.45893719806763283 0.14241604987516435 0.12036667700808107 13 96.65163468214925 2.151457400759355 0.5607077959491202 0.6362001211422831 14 58.49438239595799 28.176605504587155 5.556811298733915 7.7722008007209435 15 42.63826101729971 34.86293932544431 13.572829410982582 8.925970246273398 16 45.67970792891016 31.181229594173352 14.722148354976436 8.41691412194005 17 30.651361373339835 33.49669074738879 19.228105748349066 16.623842130922306 18 24.027408441548847 44.358943107447296 17.905752781101803 13.70789566990205 19 26.766590583403506 44.10740666873495 18.090956433098434 11.035046314763107 20 19.010178906469292 48.04785489518238 20.515242506167915 12.426723692180413 21 20.421338769962624 49.59203120152462 16.180010784617885 13.806619243894872 22 22.936186086365584 49.67788340793925 17.099159390742958 10.286771114952208 23 17.12748747950184 46.768344930490926 21.128488380682235 14.975679209325001 24 18.685864763846418 49.87710336982376 16.961969448507144 14.47506241782269 25 18.415178241664083 43.48498278893173 22.978936754864158 15.120902214540028 26 19.53238340055253 43.99056715271315 22.16120787720309 14.315841569531237 27 24.566528534917047 45.962693347515845 18.467346984000354 11.003431133566755 28 27.301777245933607 44.14555910118335 17.829189380844745 10.723474272038294 29 31.39202824683479 41.67342551965608 16.97269866595754 9.961847567551596 30 35.43027670670271 42.80904208955665 12.90623291819941 8.854448285541224 31 31.97572722303476 45.64833281626261 11.911758188184194 10.46418177251843 32 30.022695711267712 50.50043212338785 12.517820473045843 6.959051692298601 33 28.529598605386397 53.080965888105894 11.719315546100548 6.670119960407156 34 25.156690895123283 55.250797766254486 12.880120846814105 6.712390491808122 35 25.584936252566887 55.47814268197197 12.005717324823827 6.931203740637326 36 20.24293090457829 57.622139490906946 13.510947125825467 8.6239824786893 37 18.920504070085244 59.366828435934934 13.982367888430913 7.7302996055489075 38 18.11786257737594 60.588389546307376 13.415843046876155 7.87790482944053 39 18.989514544460697 61.10549720043138 11.671320303151177 8.233667951956743 40 19.21772740031615 61.62424840077413 11.278106487021525 7.8799177118881945 41 19.812229461212308 61.4554986777763 11.218237084312074 7.514034776699316 42 21.301300802198288 58.49589667449659 11.87665277962446 8.326149743680658 43 22.748249346274875 57.40766594276766 10.221897206340765 9.622187504616702 44 21.026496181063393 56.523696612448106 11.394927536231885 11.054879670256614 45 21.096836265862994 55.73778605090931 13.708191138885194 9.457186544342507 46 22.37189572899585 55.36368538462675 12.667937183294184 9.596481703083219 47 25.13056035692653 54.697328960392376 10.318718698754598 9.853391983926487 48 25.09338666548479 54.432237882078326 10.28032619775739 10.19404925467949 49 24.251059994977027 54.934738288348186 10.314637533424929 10.499564183249865 50 23.009517794619512 55.391976539762744 10.694407510821552 10.9040981547962 51 21.829894813042 55.48887189942236 11.223832528180354 11.457400759355286 52 21.53106487021525 55.17768765973792 11.500428430025558 11.790819040021274 53 20.675571363146155 55.04382174356247 11.76657211659206 12.514034776699315 54 20.275192424175273 54.26919440381746 12.36875637104995 13.08685680095732 55 20.47186396608016 52.96896467668306 12.844683035648332 13.714488321588442 56 20.544937138973836 51.73621267857407 13.450782254132873 14.268067928319224 57 20.832022189720632 49.732896039238284 14.143084548449528 15.291997222591558 58 21.270738229254384 47.605777895965375 15.201509846503864 15.92197402827638 59 21.538211526245032 45.86795860479546 16.280544106132457 16.31328576282705 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 1.0 4 7.0 5 12.0 6 24.5 7 37.0 8 322.0 9 1389.0 10 2171.0 11 3705.5 12 5240.0 13 7236.0 14 10337.5 15 11443.0 16 12217.5 17 12992.0 18 14410.0 19 18635.0 20 21442.0 21 29091.0 22 36740.0 23 52074.5 24 67409.0 25 93857.5 26 156787.5 27 193269.0 28 232563.0 29 271857.0 30 307986.5 31 367291.5 32 390467.0 33 398824.5 34 407182.0 35 403324.0 36 387412.0 37 375358.0 38 363787.0 39 352216.0 40 338865.0 41 325514.0 42 315800.5 43 296815.5 44 287544.0 45 279360.5 46 271177.0 47 262007.5 48 242912.5 49 232987.0 50 217862.5 51 202738.0 52 183432.0 53 144314.5 54 124503.0 55 103225.0 56 81947.0 57 67192.0 58 40917.5 59 29398.0 60 24059.5 61 18721.0 62 15064.0 63 11407.0 64 9230.5 65 5197.0 66 3340.0 67 2938.5 68 2537.0 69 1953.0 70 1070.0 71 771.0 72 663.5 73 556.0 74 421.0 75 222.0 76 158.0 77 127.5 78 97.0 79 93.0 80 89.0 81 56.5 82 17.0 83 10.0 84 7.5 85 5.0 86 5.0 87 3.5 88 2.0 89 1.0 90 0.0 91 0.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 5415120.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.01727725538514 #Duplication Level Percentage of deduplicated Percentage of total 1 89.48072210027817 58.17792917805854 2 4.24355507981587 5.518087943457729 3 1.62133698232181 3.162447483120798 4 0.9069682576805228 2.3587442668579253 5 0.639147019256167 2.0777799478965595 6 0.4727789213067237 1.84432789242607 7 0.3721680584101711 1.6938147687476721 8 0.30461987679839436 1.5844443989841976 9 0.23551684932394115 1.3781397861728504 >10 1.6770140683603676 18.94476043420322 >50 0.03551206061956078 1.4938514015035445 >100 0.009519060161539361 1.1689176733725672 >500 9.133338741340761E-4 0.406398254358324 >1k 2.283317927029164E-4 0.19035657083998442 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.012631299029384391 0.0 0.0 0.0 0.0 12 0.019556353321810042 0.0 0.0 0.0 0.0 13 0.033369528283768414 0.0 0.0 0.0 0.0 14 0.16031039016679224 0.0 0.0 0.0 0.0 15 0.33648377136610086 0.0 0.0 0.0 0.0 16 0.4671549291613113 0.0 0.0 0.0 0.0 17 0.5816491601294154 0.0 0.0 0.0 0.0 18 0.7203903145267325 0.0 0.0 0.0 0.0 19 0.8793895610808256 0.0 0.0 0.0 0.0 20 1.048305485381672 0.0 0.0 0.0 0.0 21 1.2035375024006856 0.0 0.0 0.0 0.0 22 1.3586771853624666 0.0 0.0 0.0 0.0 23 1.5090708977825054 0.0 0.0 0.0 0.0 24 1.6862045531770302 0.0 0.0 0.0 0.0 25 1.8858677185362467 1.8466811446468408E-5 0.0 0.0 0.0 26 2.1104241457253026 1.8466811446468408E-5 0.0 0.0 0.0 27 2.3616466486430587 1.8466811446468408E-5 0.0 0.0 0.0 28 2.626793127391452 1.8466811446468408E-5 0.0 0.0 0.0 29 2.9096492783170085 1.8466811446468408E-5 0.0 0.0 0.0 30 3.2217753253852175 1.8466811446468408E-5 0.0 0.0 0.0 31 3.534104507379338 1.8466811446468408E-5 0.0 0.0 0.0 32 3.8296288909571716 1.8466811446468408E-5 0.0 0.0 0.0 33 4.119022293134778 1.8466811446468408E-5 0.0 0.0 0.0 34 4.398702152491542 1.8466811446468408E-5 0.0 0.0 0.0 35 4.663977898920061 1.8466811446468408E-5 0.0 0.0 0.0 36 4.921811520335653 1.8466811446468408E-5 0.0 0.0 0.0 37 5.17946047363678 1.8466811446468408E-5 0.0 0.0 0.0 38 5.4330282616082375 1.8466811446468408E-5 0.0 0.0 0.0 39 5.689901608828613 1.8466811446468408E-5 0.0 0.0 0.0 40 5.948898639365333 1.8466811446468408E-5 0.0 0.0 0.0 41 6.221302575012188 1.8466811446468408E-5 0.0 0.0 0.0 42 6.508461493004772 1.8466811446468408E-5 0.0 0.0 0.0 43 6.820716807753106 1.8466811446468408E-5 0.0 0.0 0.0 44 7.14949991874603 1.8466811446468408E-5 0.0 0.0 1.8466811446468408E-5 45 7.495143228589579 1.8466811446468408E-5 0.0 0.0 1.8466811446468408E-5 46 7.852531430513082 1.8466811446468408E-5 0.0 0.0 1.8466811446468408E-5 47 8.215311941378953 1.8466811446468408E-5 0.0 0.0 1.8466811446468408E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGATTTA 20 3.1392864E-4 53.0 22 ACTAGGT 15 0.006697603 53.0 48 TAACCGT 20 3.1392864E-4 53.0 16 CTACGCG 15 0.006697603 53.0 26 TACCTAA 40 1.6025297E-9 53.0 21 CCGTCAA 115 0.0 50.695652 17 TCTAGGA 120 0.0 48.583332 32 TCAGCTA 140 0.0 47.321434 44 TGGGCGC 4755 0.0 46.590954 10 TACTGGC 165 0.0 46.57576 27 TAACGTC 80 0.0 46.375 36 ACGGATT 80 0.0 46.375 31 CTATCTA 70 0.0 45.428577 24 CGATTAA 35 2.0301122E-6 45.428577 34 TACTCTA 70 0.0 45.428577 52 CAGCTAA 70 0.0 45.428577 25 CATTTCG 35 2.0301122E-6 45.428577 29 TGGGCAG 26965 0.0 45.42296 10 CGCGATA 135 0.0 45.148148 32 CTACGGT 135 0.0 45.148148 44 >>END_MODULE