SRR1528027_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1528027_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1632086
Sequences flagged as poor quality	0
Sequence length	59
%GC	55

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCGGACACTGGGGATCACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCCCCT	2576	0.15783481997884916	No Hit
AGCCGACACTGGGATCCACGATGGCCTAGCACGTGGCATACGCGAAGCTGCCAAAGCCT	2234	0.13688004186053923	No Hit
GATGGACACTGGGGTCCCCTCCCTCGGCTCTAGACTTGGGGGAGGGGTTGCCACAGGCC	1681	0.10299702344116671	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCTTATG	50	3.6379788E-12	53.000004	49
TCGTTAG	25	1.4790081E-5	53.000004	44
ACACGTA	80	0.0	53.000004	29
CTCCGTA	25	1.4790081E-5	53.000004	33
TAGACCG	20	3.138635E-4	53.000004	31
ACACCTA	40	1.6025297E-9	53.000004	29
CTATACG	25	1.4790081E-5	53.000004	26
GGCGTAA	25	1.4790081E-5	53.000004	48
GCTATAT	50	3.6379788E-12	53.000004	21
GCTATAA	20	3.138635E-4	53.000004	47
ATTCGGC	25	1.4790081E-5	53.000004	46
ATTCGCG	160	0.0	53.000004	47
CGTCTAG	20	3.138635E-4	53.000004	43
CAATTCG	50	3.6379788E-12	53.000004	50
CCTAATA	80	0.0	53.000004	21
TAACGGC	155	0.0	53.000004	40
CCTAACC	20	3.138635E-4	53.000004	41
GCCATAC	20	3.138635E-4	53.000004	21
ATGTACG	25	1.4790081E-5	53.000004	45
TAGTTAG	25	1.4790081E-5	53.000004	42