##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528027_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1632086 Sequences flagged as poor quality 0 Sequence length 59 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.443053858681466 31.0 31.0 34.0 30.0 34.0 2 31.97137650834576 33.0 31.0 34.0 30.0 34.0 3 32.21747077053538 34.0 31.0 34.0 30.0 34.0 4 35.84081292284843 37.0 35.0 37.0 35.0 37.0 5 35.539214845296144 37.0 35.0 37.0 33.0 37.0 6 35.63008444407954 37.0 35.0 37.0 33.0 37.0 7 35.800546049656695 37.0 35.0 37.0 33.0 37.0 8 35.84908883477954 37.0 35.0 37.0 35.0 37.0 9 37.57677597871681 39.0 37.0 39.0 35.0 39.0 10 37.672889173732266 39.0 37.0 39.0 35.0 39.0 11 37.79513273197613 39.0 37.0 39.0 35.0 39.0 12 37.87081808189029 39.0 37.0 39.0 35.0 39.0 13 37.91657241101265 39.0 38.0 39.0 35.0 39.0 14 38.220543525279915 40.0 38.0 40.0 34.0 40.0 15 37.57724776758087 40.0 37.0 40.0 32.0 40.0 16 37.08737652305087 39.0 36.0 40.0 32.0 40.0 17 37.021552173108525 39.0 36.0 40.0 32.0 40.0 18 37.003620519997106 39.0 36.0 40.0 32.0 40.0 19 37.15240067006273 39.0 36.0 40.0 32.0 40.0 20 37.2741938843909 40.0 36.0 40.0 32.0 40.0 21 37.24793791503634 40.0 36.0 40.0 32.0 40.0 22 37.23578965814301 40.0 36.0 40.0 32.0 40.0 23 37.14385884077187 40.0 36.0 40.0 32.0 40.0 24 37.12066766089532 40.0 36.0 40.0 32.0 40.0 25 37.03506187786673 39.0 36.0 40.0 31.0 40.0 26 36.864141963107336 39.0 36.0 40.0 31.0 40.0 27 36.73224817809846 39.0 35.0 40.0 31.0 40.0 28 36.70580962032638 39.0 35.0 40.0 31.0 40.0 29 36.67022632385793 39.0 35.0 40.0 31.0 40.0 30 36.65825575367965 39.0 35.0 40.0 30.0 40.0 31 36.624484861704595 39.0 35.0 40.0 31.0 40.0 32 36.532255653194746 39.0 35.0 40.0 30.0 40.0 33 36.36884943563023 39.0 35.0 40.0 30.0 40.0 34 36.31545457776122 39.0 35.0 40.0 30.0 40.0 35 36.18183845704209 39.0 35.0 40.0 30.0 40.0 36 36.009182114177804 38.0 35.0 40.0 30.0 40.0 37 35.85897924496626 38.0 35.0 40.0 29.0 40.0 38 35.630808670621526 38.0 35.0 40.0 28.0 40.0 39 35.46459622838503 38.0 34.0 40.0 28.0 40.0 40 35.28116471803569 38.0 34.0 40.0 27.0 40.0 41 35.088745323469475 37.0 34.0 40.0 27.0 40.0 42 34.95802365806704 37.0 34.0 40.0 27.0 40.0 43 34.68757161080973 37.0 33.0 40.0 26.0 40.0 44 34.5347444926309 37.0 33.0 40.0 26.0 40.0 45 34.320138767197314 36.0 33.0 40.0 25.0 40.0 46 34.12120194646606 36.0 33.0 39.0 24.0 40.0 47 33.94187377380849 36.0 33.0 39.0 24.0 40.0 48 33.720859685090126 35.0 33.0 39.0 23.0 40.0 49 33.55653256017146 35.0 33.0 39.0 23.0 40.0 50 33.29688876689096 35.0 32.0 39.0 23.0 40.0 51 33.078965814301455 35.0 32.0 38.0 22.0 40.0 52 32.85939895324143 35.0 32.0 38.0 22.0 40.0 53 32.55240655210571 35.0 31.0 38.0 20.0 40.0 54 32.333056591380604 35.0 31.0 37.0 20.0 40.0 55 32.11380711555641 35.0 31.0 37.0 20.0 40.0 56 31.838663526309276 35.0 31.0 37.0 19.0 40.0 57 31.644079417383644 35.0 31.0 37.0 18.0 39.0 58 31.40564651617623 34.0 30.0 36.0 18.0 39.0 59 30.876484449961584 34.0 29.0 36.0 17.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 3.0 14 8.0 15 45.0 16 137.0 17 432.0 18 920.0 19 1752.0 20 3075.0 21 4583.0 22 6505.0 23 9136.0 24 12343.0 25 16291.0 26 21026.0 27 26426.0 28 32366.0 29 38390.0 30 46031.0 31 55470.0 32 68099.0 33 84529.0 34 113464.0 35 158431.0 36 192013.0 37 289500.0 38 367021.0 39 84089.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.99715088543128 24.7142613808341 36.89358281365075 13.395004920083869 2 16.60188249883891 23.010797225146224 37.12586224010254 23.261458035912323 3 18.21399117448468 19.631624804085078 38.65978876113146 23.494595260298784 4 23.333574333705453 21.134364243060723 33.62837497533831 21.903686447895517 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 0.0 0.0 0.0 100.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 0.0 100.0 10 0.0 0.0 100.0 0.0 11 99.48403454229741 0.30482462321225723 0.1357158875206331 0.07542494696970625 12 99.493776675984 0.3198973583499889 0.09276471950620249 0.09356124615982246 13 98.38507284542604 0.8775272871650145 0.2960015587413899 0.44139830866755797 14 60.53957940941837 24.869155179322657 6.8487199816676325 7.742545429591333 15 33.16694095776816 24.623028443354087 20.95698388442766 21.253046714450097 16 29.9922920728442 17.334809562731376 28.68274098301192 23.990157381412498 17 23.99119899319031 18.125209088246574 30.305020691311608 27.5785712272515 18 22.214576927931493 20.351317271271245 32.13819614897744 25.29590965181982 19 22.8271671958463 21.0420896938029 29.09840535363945 27.03233775671135 20 26.565634408971096 20.28667606976593 24.880919265283815 28.266770255979157 21 29.267881717017364 20.3285243547215 20.31749552413292 30.086098404128215 22 29.892297342174373 20.2279169112412 21.43545131812907 28.444334428455363 23 29.480125434566563 21.583666546983434 20.525388980727733 28.41081903772228 24 29.134371595614443 22.884762200031126 20.35058201589867 27.630284188455757 25 32.05811458464811 20.815263411364352 21.25298544316905 25.873636560818486 26 29.280871228599477 21.252617815482765 21.419091886089337 28.04741906982843 27 28.93934510803965 23.477071673919145 21.604376239977547 25.979206978063658 28 31.02489697234092 22.674479163475453 21.255497565692004 25.04512629849162 29 29.859272121689667 22.99076151624363 19.822362301986537 27.32760406008017 30 29.741753804640197 22.91147647856792 19.69675617583877 27.65001354095311 31 28.423808549304386 23.975942444209437 20.27344147305963 27.326807533426546 32 28.400402919944167 25.241990924497852 19.907529382642828 26.450076772915153 33 29.181305396896978 25.27532250138779 20.267130531111718 25.27624157060351 34 28.98921993081247 24.06766555193783 20.56968811692521 26.37342640032449 35 29.016363108316597 25.75066509975577 19.574458698867584 25.658513093060048 36 31.12538187325913 24.126057082776274 19.39713961151557 25.351421432449023 37 30.035549597263874 24.611386899955026 19.768137218259334 25.58492628452177 38 29.30881093275722 26.740870272767488 21.30414696284387 22.64617183163142 39 30.681287628225473 25.647177906066226 21.346669231890967 22.324865233817334 40 30.152332658940768 26.01321253904512 18.9905433904831 24.84391141153101 41 29.736484474470092 27.75533887307409 19.305722860192418 23.202453792263398 42 31.12507551685389 27.13594749296299 18.59025811139854 23.148718878784575 43 28.99424417585838 26.809432836259855 19.439110439033236 24.75721254884853 44 28.71723671424177 27.42919184405724 20.08435829974646 23.76921314195453 45 25.947284640637807 27.29127019041889 20.09832815182533 26.663117017117973 46 25.88129547094945 24.851937949348258 22.32633574456248 26.940430835139818 47 27.64070030623386 24.53142787818779 22.57540350202134 25.25246831355701 48 26.550806758957556 24.746122446978898 21.721404386778637 26.98166640728491 49 28.23760512620046 23.63123021703513 22.53741530777177 25.593749348992638 50 27.91317369305294 24.084760239350132 20.757668407179526 27.244397660417402 51 27.287838998680215 26.65202691524834 21.599964707742117 24.460169378329326 52 28.04043414378899 26.1703121036514 21.480118082012837 24.309135670546773 53 25.686330254655697 26.906486545439396 21.6720197342542 25.735163465650707 54 26.269939206634945 25.0908346741532 22.448817035376813 26.190409083835043 55 26.037292152496867 26.544434545728596 22.544461505092254 24.873811796682283 56 27.09655005924933 24.85077379500835 21.239260676214368 26.81341546952795 57 26.68388798139314 24.404535055138027 21.55425633208054 27.357320631388298 58 27.40125213989949 24.073608866199454 21.696099347705943 26.829039646195113 59 26.30608926245308 24.472484905819915 22.98971990446582 26.231705927261185 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.5 5 1.0 6 3.5 7 6.0 8 5.0 9 26.0 10 48.0 11 224.5 12 401.0 13 473.5 14 709.5 15 873.0 16 989.0 17 1105.0 18 1175.5 19 1521.5 20 1797.0 21 2097.5 22 2398.0 23 2989.0 24 3580.0 25 5065.5 26 8396.0 27 10241.0 28 11401.0 29 12561.0 30 13796.5 31 15572.5 32 16113.0 33 16540.5 34 16968.0 35 18799.0 36 23296.5 37 25963.0 38 26667.0 39 27371.0 40 29086.0 41 30801.0 42 33065.0 43 37260.5 44 39192.0 45 42007.5 46 44823.0 47 45714.5 48 54335.5 49 62065.0 50 62560.5 51 63056.0 52 71633.5 53 86512.5 54 92814.0 55 103829.0 56 114844.0 57 125758.0 58 139648.0 59 142624.0 60 131624.5 61 120625.0 62 111126.0 63 101627.0 64 95142.0 65 81524.0 66 74391.0 67 64490.5 68 54590.0 69 50612.0 70 38751.5 71 30869.0 72 30880.5 73 30892.0 74 23593.5 75 12802.5 76 9310.0 77 5872.5 78 2435.0 79 2288.5 80 2142.0 81 1443.5 82 510.5 83 276.0 84 179.5 85 83.0 86 57.0 87 20.0 88 9.0 89 5.5 90 2.0 91 1.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 1632086.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.068638547851492 #Duplication Level Percentage of deduplicated Percentage of total 1 83.4978001273391 13.416959697869604 2 6.452534844126907 2.0736690025538507 3 2.6192292234204224 1.2626234299533758 4 1.5083023202069605 0.9694545921716565 5 0.9291937815216991 0.7465439508091736 6 0.6243478319344653 0.6019451783693792 7 0.42719690580579406 0.48051308677077054 8 0.2987832457156401 0.38408319836468147 9 0.22628627503841833 0.3272501125738848 >10 1.681291688615035 5.32044419066855 >50 0.31222179549363854 3.67809209678079 >100 1.2347126950996956 49.405733539550624 >500 0.17392477926629285 18.408620096905157 >1k 0.014174486415975409 2.9240678266585025 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGCGGACACTGGGGATCACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCCCCT 2576 0.15783481997884916 No Hit AGCCGACACTGGGATCCACGATGGCCTAGCACGTGGCATACGCGAAGCTGCCAAAGCCT 2234 0.13688004186053923 No Hit GATGGACACTGGGGTCCCCTCCCTCGGCTCTAGACTTGGGGGAGGGGTTGCCACAGGCC 1681 0.10299702344116671 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.004595346078576742 0.0 0.0 0.0 0.0 12 0.006678569634198198 0.0 0.0 0.0 0.0 13 0.010109761372868831 0.0 0.0 0.0 0.0 14 0.031125810772226464 0.0 0.0 0.0 0.0 15 0.05361237091672865 0.0 0.0 0.0 0.0 16 0.07021688808065261 0.0 0.0 0.0 0.0 17 0.0842480114405736 0.0 0.0 0.0 0.0 18 0.10091379988554525 0.0 0.0 0.0 0.0 19 0.1253610410235735 0.0 0.0 0.0 0.0 20 0.14827650013540952 0.0 0.0 0.0 0.0 21 0.17388789561334392 0.0 0.0 0.0 0.0 22 0.1993767485291829 0.0 0.0 0.0 0.0 23 0.22345636198092503 0.0 0.0 0.0 0.0 24 0.2501706405177178 0.0 0.0 0.0 0.0 25 0.27909068517222746 0.0 0.0 0.0 0.0 26 0.3162210814871275 0.0 0.0 0.0 0.0 27 0.3534127490830753 0.0 0.0 0.0 0.0 28 0.3937905232935029 0.0 0.0 0.0 0.0 29 0.43729313283736276 0.0 0.0 0.0 0.0 30 0.4926823709044744 0.0 0.0 0.0 0.0 31 0.5426184649583417 0.0 0.0 0.0 0.0 32 0.5872852288421075 0.0 0.0 0.0 0.0 33 0.6197590077973832 0.0 0.0 0.0 0.0 34 0.6548674518377096 0.0 0.0 0.0 0.0 35 0.6888730128191775 0.0 0.0 0.0 0.0 36 0.7267386645066498 0.0 0.0 0.0 0.0 37 0.7653395715666944 0.0 0.0 0.0 0.0 38 0.807494212927505 0.0 0.0 0.0 0.0 39 0.8573690357003246 0.0 0.0 0.0 0.0 40 0.9072438584731441 0.0 0.0 0.0 0.0 41 0.954484016160913 0.0 0.0 0.0 0.0 42 1.004297567652685 0.0 0.0 0.0 0.0 43 1.0479839910396878 0.0 0.0 0.0 0.0 44 1.0923443985182153 0.0 0.0 0.0 0.0 45 1.1348053962842644 0.0 0.0 0.0 0.0 46 1.1773889366124088 0.0 0.0 0.0 0.0 47 1.215315859580929 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTTATG 50 3.6379788E-12 53.000004 49 TCGTTAG 25 1.4790081E-5 53.000004 44 ACACGTA 80 0.0 53.000004 29 CTCCGTA 25 1.4790081E-5 53.000004 33 TAGACCG 20 3.138635E-4 53.000004 31 ACACCTA 40 1.6025297E-9 53.000004 29 CTATACG 25 1.4790081E-5 53.000004 26 GGCGTAA 25 1.4790081E-5 53.000004 48 GCTATAT 50 3.6379788E-12 53.000004 21 GCTATAA 20 3.138635E-4 53.000004 47 ATTCGGC 25 1.4790081E-5 53.000004 46 ATTCGCG 160 0.0 53.000004 47 CGTCTAG 20 3.138635E-4 53.000004 43 CAATTCG 50 3.6379788E-12 53.000004 50 CCTAATA 80 0.0 53.000004 21 TAACGGC 155 0.0 53.000004 40 CCTAACC 20 3.138635E-4 53.000004 41 GCCATAC 20 3.138635E-4 53.000004 21 ATGTACG 25 1.4790081E-5 53.000004 45 TAGTTAG 25 1.4790081E-5 53.000004 42 >>END_MODULE