##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528026_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 11076971 Sequences flagged as poor quality 0 Sequence length 52 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.79753968842204 33.0 31.0 34.0 30.0 34.0 2 32.35583400913481 34.0 31.0 34.0 30.0 34.0 3 32.51986928556552 34.0 31.0 34.0 31.0 34.0 4 36.036171982394826 37.0 35.0 37.0 35.0 37.0 5 36.04541593545745 37.0 35.0 37.0 35.0 37.0 6 36.143669420096884 37.0 36.0 37.0 35.0 37.0 7 36.077330616826565 37.0 35.0 37.0 35.0 37.0 8 36.12892829637272 37.0 36.0 37.0 35.0 37.0 9 38.00125846677761 39.0 38.0 39.0 35.0 39.0 10 37.715543987611774 39.0 38.0 39.0 35.0 39.0 11 37.85827939786066 39.0 37.0 39.0 35.0 39.0 12 37.96558987109382 39.0 37.0 39.0 35.0 39.0 13 38.049060253024045 39.0 38.0 39.0 37.0 39.0 14 38.67434743667741 40.0 39.0 40.0 36.0 40.0 15 38.13932626527595 40.0 38.0 40.0 34.0 40.0 16 37.3205253493938 39.0 36.0 40.0 33.0 40.0 17 37.27959457508736 39.0 36.0 40.0 33.0 40.0 18 37.24173359305536 40.0 36.0 40.0 33.0 40.0 19 37.39230625411947 40.0 36.0 40.0 33.0 40.0 20 37.40831685846248 40.0 36.0 40.0 33.0 40.0 21 37.15974150334058 40.0 36.0 40.0 32.0 40.0 22 37.22917862653969 40.0 35.0 40.0 32.0 40.0 23 37.20508052246413 40.0 35.0 40.0 32.0 40.0 24 37.19547067515118 40.0 35.0 40.0 32.0 40.0 25 37.351188063957196 40.0 35.0 40.0 33.0 40.0 26 37.37689464024055 40.0 35.0 40.0 33.0 40.0 27 37.38999957659905 40.0 35.0 40.0 33.0 40.0 28 37.36656356688123 40.0 35.0 40.0 33.0 40.0 29 37.37197912678475 40.0 35.0 40.0 33.0 40.0 30 37.339747932896096 40.0 35.0 40.0 33.0 40.0 31 37.29647752982291 40.0 35.0 40.0 33.0 40.0 32 37.242680602847116 40.0 35.0 40.0 33.0 40.0 33 37.16561919318919 40.0 35.0 40.0 33.0 40.0 34 37.042761870551075 40.0 35.0 40.0 33.0 40.0 35 36.94509473754152 39.0 35.0 40.0 32.0 40.0 36 36.87203749111558 39.0 35.0 40.0 32.0 40.0 37 36.76603874831847 39.0 35.0 40.0 32.0 40.0 38 36.516505369563575 39.0 35.0 40.0 31.0 40.0 39 36.42115692096693 39.0 35.0 40.0 31.0 40.0 40 36.32216099509514 38.0 35.0 40.0 31.0 40.0 41 36.19670937118099 38.0 35.0 40.0 31.0 40.0 42 36.05955247151952 38.0 35.0 40.0 31.0 40.0 43 35.89199556449141 38.0 35.0 40.0 31.0 40.0 44 35.72147241335199 37.0 35.0 40.0 30.0 40.0 45 35.55194068847883 37.0 35.0 40.0 30.0 40.0 46 35.41195223856774 37.0 35.0 40.0 30.0 40.0 47 35.26134996652063 36.0 34.0 40.0 30.0 40.0 48 35.10282522180477 36.0 34.0 40.0 29.0 40.0 49 34.942646595355356 35.0 34.0 40.0 29.0 40.0 50 34.79096081410703 35.0 34.0 39.0 28.0 40.0 51 34.62173819900765 35.0 34.0 39.0 28.0 40.0 52 33.966239778004294 35.0 33.0 38.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 12.0 13 26.0 14 36.0 15 59.0 16 167.0 17 542.0 18 1460.0 19 3058.0 20 5640.0 21 9683.0 22 16081.0 23 24290.0 24 35588.0 25 50652.0 26 69043.0 27 92683.0 28 121300.0 29 156138.0 30 199350.0 31 251049.0 32 312412.0 33 403446.0 34 634067.0 35 1315159.0 36 926326.0 37 1762628.0 38 3252202.0 39 1433870.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.84794047036866 19.507733657513413 34.331831328257515 17.31249454386041 2 23.01563306430973 21.07364007723772 35.87292952197853 20.03779733647402 3 22.22780036166927 21.070706062153636 36.037983669001214 20.663509907175886 4 21.33579658193562 23.53758983389954 31.813128336257268 23.313485247907572 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 0.0 100.0 0.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 100.0 0.0 0.0 11 99.5783504353311 0.364648422389117 0.04117551630314822 0.01582562597663206 12 99.26861774757738 0.6409152827067977 0.057389335044751855 0.03307763467106666 13 98.58398112624832 0.8131374542733749 0.2149865698844928 0.38789484959381043 14 66.9052487363197 19.80102683305752 6.384958487297656 6.908765943325121 15 40.18702405197233 25.44022188015117 14.786993664603798 19.5857604032727 16 34.75441977775332 15.803878154054932 23.96944074332234 25.472261324869404 17 25.896113657786053 15.475792073482905 26.48630207662365 32.141792192107395 18 23.75829096239396 17.96455005614802 31.379851044116663 26.897307937341353 19 28.580249961835236 16.842681993118877 28.488311470708013 26.088756574337875 20 31.64475198138553 17.259276024104423 25.04429234309632 26.05167965141373 21 33.156401691401015 17.90326073797611 22.550532993180177 26.389804577442693 22 32.225109192756754 19.570530608051605 22.30118684972634 25.903173349465302 23 30.47303274514305 21.850919353314186 20.568465873928893 27.10758202761387 24 30.446762025467073 24.709516708132576 19.61829637362055 25.225424892779802 25 30.210343603860657 21.640672346257837 22.98783665679002 25.161147393091486 26 29.052247225347074 20.72943948305001 23.042978084893427 27.175335206709487 27 31.48425684241658 20.898709584055062 21.492482015164615 26.124551558363745 28 33.05357574737715 20.054814623961732 20.010362038503125 26.881247590157997 29 32.13039015810369 19.07015013400324 18.643571423993073 30.155888283899994 30 29.20774099706499 18.149736060516904 21.382117909309322 31.26040503310878 31 27.09604457752936 18.390478768970326 21.651180634128227 32.86229601937208 32 28.602819308635908 23.640135918023077 18.665978271496783 29.09106650184423 33 32.23566261932075 22.576939128936964 18.73967170267034 26.44772654907194 34 31.09440297352047 20.63435031110942 21.753266303577036 26.51798041179308 35 33.07770689297643 21.263917726244838 20.582684562413316 25.07569081836542 36 36.20034754988525 20.036343870540062 19.798101845712154 23.965206733862534 37 35.58090022985525 19.875307067247896 19.7849845413516 24.758808161545247 38 30.883126804250004 23.262848661425583 23.330746284340727 22.523278249983683 39 29.809051590005968 25.777651670298678 23.55439948339668 20.858897256298675 40 30.708322699409436 28.232636882411267 18.924893817994107 22.134146600185193 41 31.44151952731482 26.377644213386493 18.180999119705195 23.999837139593485 42 32.37604395642094 25.596591342524956 17.345174958027787 24.68218974302632 43 32.1768469015582 24.18734327281348 17.384066456434706 26.25174336919362 44 31.199151825891754 23.117529151245407 18.877669716748375 26.80564930611446 45 27.83993927581827 23.80612894987267 20.282629610567724 28.071302163741336 46 27.79390683608362 23.123180515684297 19.747257621239598 29.335655026992484 47 28.449465110994694 19.275783966573535 22.134597987121207 30.140152935310567 48 29.975685591304696 18.638913110813416 20.63778987956184 30.74761141832004 49 30.679912405656744 20.168564131837126 20.980843950932073 28.170679511574058 50 29.072794358674408 22.909105747410553 19.96232544077257 28.05577445314247 51 27.68394897847074 22.405764175061936 22.069345491651102 27.840941354816223 52 28.942424783814996 21.496788246534184 22.98407208974367 26.576714879907154 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 2.5 2 5.0 3 29.0 4 53.0 5 107.0 6 161.0 7 324.5 8 488.0 9 891.0 10 1294.0 11 1931.5 12 2569.0 13 3431.0 14 5509.0 15 6725.0 16 7638.5 17 8552.0 18 11281.5 19 14011.0 20 18633.5 21 23256.0 22 32186.5 23 41117.0 24 51084.5 25 61052.0 26 64303.5 27 67555.0 28 68557.0 29 69559.0 30 71614.0 31 73669.0 32 82031.0 33 90393.0 34 100067.5 35 109742.0 36 117063.0 37 124384.0 38 149420.0 39 191122.0 40 207788.0 41 246017.5 42 284247.0 43 335722.5 44 387198.0 45 419958.0 46 452718.0 47 492047.5 48 531377.0 49 556900.0 50 582423.0 51 641159.5 52 699896.0 53 804931.0 54 909966.0 55 986566.0 56 1063166.0 57 1103479.0 58 1143792.0 59 1081689.5 60 1019587.0 61 938994.5 62 858402.0 63 742253.0 64 555012.0 65 483920.0 66 423983.5 67 364047.0 68 308737.5 69 253428.0 70 211801.0 71 170174.0 72 129832.5 73 89491.0 74 68396.0 75 47301.0 76 33179.0 77 19057.0 78 12507.5 79 5958.0 80 3997.5 81 2037.0 82 1521.0 83 1005.0 84 702.0 85 399.0 86 264.0 87 129.0 88 78.0 89 13.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1.1076971E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 6.937037673582544 #Duplication Level Percentage of deduplicated Percentage of total 1 70.96699514772897 4.923007189207454 2 8.752437324955135 1.214319749177676 3 4.407124243345933 0.9171716072474911 4 2.6717827407257304 0.7413703011216806 5 1.7487703636123242 0.6065642947411669 6 1.213544501017493 0.5051042353276367 7 0.8009507346925028 0.3889357794871856 8 0.5808557126737208 0.32235343693865914 9 0.4531627707228957 0.28292464914927984 >10 3.0274324608203247 4.424183334964755 >50 1.132459587455345 5.8847093625637825 >100 3.865501396007985 61.11450855680985 >500 0.34309748255889144 15.407156357540003 >1k 0.035885533682890006 3.2676911457234024 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.020393661769088318 0.0 0.0 0.0 0.0 11 0.021910321874093558 0.0 0.0 0.0 0.0 12 0.029222790237511682 0.0 0.0 0.0 0.0 13 0.035749845332266376 0.0 0.0 0.0 0.0 14 0.053940738853608984 0.0 0.0 0.0 0.0 15 0.07788230193976313 0.0 0.0 0.0 0.0 16 0.08954614036635106 0.0 0.0 0.0 0.0 17 0.09860096230278115 0.0 0.0 0.0 0.0 18 0.11548283370968472 0.0 0.0 0.0 0.0 19 0.12920499656449402 0.0 0.0 0.0 0.0 20 0.14141952705301838 0.0 0.0 0.0 0.0 21 0.15609863021217624 0.0 0.0 0.0 0.0 22 0.1715992575948786 0.0 0.0 0.0 0.0 23 0.18877904437955106 0.0 0.0 0.0 9.027738720269287E-6 24 0.20656368965848154 0.0 0.0 0.0 9.027738720269287E-6 25 0.22392403121755938 0.0 0.0 0.0 9.027738720269287E-6 26 0.24493157921962602 0.0 0.0 0.0 9.027738720269287E-6 27 0.2685120327569694 0.0 0.0 0.0 9.027738720269287E-6 28 0.29016055020817516 0.0 0.0 0.0 9.027738720269287E-6 29 0.3131090620350997 0.0 0.0 0.0 9.027738720269287E-6 30 0.34039088844775345 0.0 0.0 0.0 9.027738720269287E-6 31 0.366860218375583 0.0 0.0 0.0 9.027738720269287E-6 32 0.3977170293214634 0.0 0.0 0.0 9.027738720269287E-6 33 0.4218301194433027 0.0 0.0 0.0 9.027738720269287E-6 34 0.4415015621147695 0.0 0.0 0.0 9.027738720269287E-6 35 0.4602160644818877 0.0 0.0 0.0 9.027738720269287E-6 36 0.47851529086787353 0.0 0.0 0.0 9.027738720269287E-6 37 0.4985749263043119 0.0 0.0 0.0 9.027738720269287E-6 38 0.5223088513998998 0.0 0.0 0.0 9.027738720269287E-6 39 0.5525698315902425 0.0 0.0 0.0 9.027738720269287E-6 40 0.5986203268023361 0.0 0.0 0.0 9.027738720269287E-6 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATCGA 20 6.3138263E-4 46.000004 46 TCGACAA 13940 0.0 43.937588 2 GACAATA 247925 0.0 43.613956 4 TAGGGGC 167890 0.0 43.58616 9 CGAACAA 10260 0.0 43.53411 2 TGACAAT 83170 0.0 43.522182 3 GAACAAT 47965 0.0 43.396225 3 CATATGC 9535 0.0 43.37074 37 ATAGGGG 770765 0.0 43.354042 8 TAGGGGA 180435 0.0 43.32441 9 TTACAAT 146520 0.0 43.284332 3 TAGGGAT 48415 0.0 43.27791 9 CAACAAT 70220 0.0 43.271576 3 AATAGGG 1149810 0.0 43.254745 7 ACAATAG 1172895 0.0 43.253677 5 CAATAGG 1165095 0.0 43.248516 6 AACAATA 278045 0.0 43.213978 4 CGTACAA 16985 0.0 43.210476 2 CGACAAT 48590 0.0 43.164642 3 CACAATA 276335 0.0 43.13098 4 >>END_MODULE