##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528025_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10987753 Sequences flagged as poor quality 0 Sequence length 52 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.73903472347804 31.0 31.0 34.0 30.0 34.0 2 32.192187156009055 34.0 31.0 34.0 30.0 34.0 3 32.44953222009996 34.0 31.0 34.0 30.0 34.0 4 36.005057539972 37.0 35.0 37.0 35.0 37.0 5 36.02931500189347 37.0 35.0 37.0 35.0 37.0 6 36.130881991977795 37.0 36.0 37.0 35.0 37.0 7 36.07711949840882 37.0 35.0 37.0 35.0 37.0 8 36.072975976070815 37.0 35.0 37.0 35.0 37.0 9 37.990718120438274 39.0 38.0 39.0 35.0 39.0 10 37.70133220140642 39.0 38.0 39.0 35.0 39.0 11 37.841400238975154 39.0 37.0 39.0 35.0 39.0 12 37.929878656718984 39.0 37.0 39.0 35.0 39.0 13 38.057694234662904 39.0 39.0 39.0 37.0 39.0 14 38.70461576629908 40.0 39.0 40.0 36.0 40.0 15 38.16352997742123 40.0 38.0 40.0 34.0 40.0 16 37.352745643263006 39.0 36.0 40.0 33.0 40.0 17 37.322472301661676 40.0 36.0 40.0 33.0 40.0 18 37.3092683281104 40.0 36.0 40.0 33.0 40.0 19 37.45004597391296 40.0 36.0 40.0 33.0 40.0 20 37.44497041387807 40.0 36.0 40.0 33.0 40.0 21 37.39076551866428 40.0 36.0 40.0 33.0 40.0 22 37.3570912087303 40.0 36.0 40.0 32.0 40.0 23 37.30458866339642 40.0 35.0 40.0 32.0 40.0 24 37.30016464694829 40.0 35.0 40.0 32.0 40.0 25 37.2676504468202 40.0 35.0 40.0 32.0 40.0 26 37.290670713111226 40.0 35.0 40.0 33.0 40.0 27 37.34992395624474 40.0 35.0 40.0 33.0 40.0 28 37.1855953624003 40.0 35.0 40.0 33.0 40.0 29 37.295627322529 40.0 35.0 40.0 33.0 40.0 30 37.32678865278461 40.0 35.0 40.0 33.0 40.0 31 37.32294036824454 40.0 35.0 40.0 33.0 40.0 32 37.266547946609286 40.0 35.0 40.0 33.0 40.0 33 37.18282673445608 40.0 35.0 40.0 33.0 40.0 34 37.08473852661231 40.0 35.0 40.0 33.0 40.0 35 36.92039655423634 39.0 35.0 40.0 32.0 40.0 36 36.471003216035164 39.0 35.0 40.0 31.0 40.0 37 36.58667217947109 39.0 35.0 40.0 31.0 40.0 38 36.45312221707204 39.0 35.0 40.0 31.0 40.0 39 36.39244129350195 39.0 35.0 40.0 31.0 40.0 40 36.302908884100326 38.0 35.0 40.0 31.0 40.0 41 36.21108719862924 38.0 35.0 40.0 31.0 40.0 42 35.92930638320683 38.0 35.0 40.0 31.0 40.0 43 35.76256128072773 38.0 35.0 40.0 30.0 40.0 44 35.59797694760703 37.0 35.0 40.0 30.0 40.0 45 35.18825323066509 37.0 34.0 40.0 28.0 40.0 46 35.20510153440836 37.0 34.0 40.0 29.0 40.0 47 35.135849431635386 36.0 34.0 40.0 29.0 40.0 48 34.97657510138788 36.0 34.0 40.0 29.0 40.0 49 34.819650478127784 35.0 34.0 40.0 28.0 40.0 50 34.60365399549844 35.0 34.0 39.0 27.0 40.0 51 34.52416212850799 35.0 34.0 39.0 27.0 40.0 52 34.01576819209533 35.0 33.0 39.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 9.0 13 17.0 14 17.0 15 81.0 16 207.0 17 583.0 18 1473.0 19 3150.0 20 5708.0 21 9760.0 22 16157.0 23 24732.0 24 36286.0 25 51315.0 26 70658.0 27 93464.0 28 123583.0 29 159494.0 30 203959.0 31 254315.0 32 317216.0 33 413360.0 34 646197.0 35 1291143.0 36 939134.0 37 1771636.0 38 3139930.0 39 1414165.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.8730917049191 19.501403062118342 34.29502829195378 17.330476941008776 2 23.132463935073897 21.13173639778761 35.740719690367996 19.995079976770498 3 22.27086830219063 20.998579054334403 36.07249817137316 20.658054472101803 4 21.336145797962512 23.538770847870353 31.817852112256258 23.30723124191088 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 0.0 100.0 0.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 100.0 0.0 0.0 11 99.57213271903727 0.3660530046498133 0.044176457188289546 0.017637819124619928 12 99.2715708116118 0.6388476333605242 0.059748339810696514 0.029833215216978393 13 98.58784594083977 0.8104477776302398 0.21311909723489417 0.38858718429509653 14 66.90702821586908 19.81998503242656 6.380831458442867 6.892155293261506 15 40.18085408363293 25.46523388357929 14.810079913518258 19.543832119269517 16 34.77632778967638 15.803030883566457 23.963261642303028 25.45737968445414 17 25.896541358365084 15.483320384067605 26.506565992155085 32.11357226541223 18 23.771803024694858 17.97815258497347 31.346072304319183 26.90397208601249 19 28.57718042988407 16.865140670708563 28.500112807413853 26.05756609199351 20 31.652904829586177 17.265923251096016 25.047523365332292 26.03364855398552 21 32.8954336705603 17.98154727358724 22.56399465841651 26.559024397435945 22 32.24697533699565 19.593724030745868 22.309010768625757 25.85028986363272 23 30.47536652853409 21.85627034025974 20.56596102952078 27.102402101685396 24 30.428323243159905 24.728813980438037 19.623666458465166 25.219196317936888 25 30.253210096732243 21.63601602620663 22.952618246879048 25.158155630182076 26 29.051244599327998 20.731308758032693 23.0374763611814 27.179970281457912 27 31.47810111858175 20.92113828914793 21.46447958922994 26.136281003040384 28 33.15842647718783 20.069763126273408 20.00754840411866 26.764261992420106 29 32.11757672383062 19.109930847553635 18.63587577915157 30.13661664946418 30 29.20312278588716 18.177101360032392 21.373887818555804 31.245888035524644 31 27.09209062125805 18.40143294083877 21.63980205962038 32.8666743782828 32 28.585662600897564 23.661525700477615 18.673426677865802 29.07938502075902 33 32.2548750413301 22.5920531704708 18.718285713193588 26.434786075005505 34 31.08473588731017 20.65825469502272 21.746657392098275 26.510352025568828 35 33.1058679604465 21.307923467154747 20.563749476348804 25.022459096049936 36 36.2329313372807 19.991958319412532 19.870859856423785 23.904250486882987 37 35.57776553586525 19.874017917949192 19.78333513685646 24.764881409329096 38 30.87600349225178 23.30472845539939 23.338729947788234 22.480538104560598 39 29.814776506170098 25.786819197701295 23.5478081824373 20.850596113691306 40 30.730614348538776 28.253137834459874 18.898486342020977 22.117761474980373 41 31.434725553077143 26.386423138561632 18.188250136310856 23.990601172050372 42 32.4447136734872 25.579770495387 17.404468411330324 24.571047419795473 43 32.123556108332615 24.223405822828383 17.398752957042262 26.254285111796744 44 31.41319248803645 23.062304003375395 18.820535918490343 26.70396759009781 45 27.88411789016371 23.80067152947468 20.340455414314466 27.974755166047142 46 27.802663565516987 23.217658787925068 19.76048242074608 29.219195225811866 47 28.44477847290524 19.291960785794878 22.12386827406841 30.139392467231474 48 30.024127772074966 18.64452176891854 20.63926082066097 30.692089638345525 49 30.735774639273377 20.131559200502597 20.974415788196186 28.158250372027837 50 29.20423311299408 22.859896832409685 19.97655935658546 27.959310698010775 51 27.674411683626303 22.43544244214445 22.05939649353239 27.830749380696858 52 28.956065903556443 21.495150100298034 22.92588848693632 26.62289550920921 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 2.0 2 4.0 3 30.5 4 57.0 5 88.5 6 120.0 7 305.5 8 491.0 9 838.0 10 1185.0 11 1903.5 12 2622.0 13 3408.0 14 5400.5 15 6607.0 16 7523.0 17 8439.0 18 11080.0 19 13721.0 20 18425.5 21 23130.0 22 31549.0 23 39968.0 24 49757.0 25 59546.0 26 63365.5 27 67185.0 28 68227.5 29 69270.0 30 71173.0 31 73076.0 32 81417.5 33 89759.0 34 99399.0 35 109039.0 36 117018.5 37 124998.0 38 148506.5 39 189524.0 40 207033.0 41 244589.0 42 282145.0 43 333268.5 44 384392.0 45 417176.0 46 449960.0 47 488729.5 48 527499.0 49 553338.0 50 579177.0 51 638570.0 52 697963.0 53 801523.0 54 905083.0 55 979335.5 56 1053588.0 57 1092224.5 58 1130861.0 59 1070472.0 60 1010083.0 61 929834.5 62 849586.0 63 735566.5 64 550521.5 65 479496.0 66 420118.0 67 360740.0 68 306213.5 69 251687.0 70 209897.5 71 168108.0 72 128072.5 73 88037.0 74 67577.0 75 47117.0 76 32884.0 77 18651.0 78 12284.5 79 5918.0 80 3986.0 81 2054.0 82 1531.0 83 1008.0 84 719.5 85 431.0 86 291.5 87 152.0 88 81.5 89 5.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1.0987753E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.168220438027477 #Duplication Level Percentage of deduplicated Percentage of total 1 69.73235523991949 4.998568940225833 2 9.579525325653265 1.3733629845189912 3 4.646747021128087 0.9992672090158097 4 2.7722644739129434 0.7948881144608101 5 1.7460427560826792 0.6258009684910842 6 1.2268300005269104 0.5276512730257356 7 0.8358091173409743 0.41938847980492944 8 0.6021459806975998 0.3453052100410107 9 0.43152211819628955 0.27839211004039965 >10 3.0554069883606907 4.658543562585482 >50 1.1823185979691626 6.3469120526756875 >100 3.853696739384465 61.724632792607345 >500 0.3043528177807619 14.023932872639389 >1k 0.03098282304708111 2.8833534298676695 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.020286222305870908 0.0 0.0 0.0 0.0 11 0.021796995254625764 0.0 0.0 0.0 0.0 12 0.029560183961179324 0.0 0.0 0.0 0.0 13 0.03590361013757772 0.0 0.0 0.0 0.0 14 0.05415119906681557 0.0 0.0 0.0 0.0 15 0.0781324443678339 0.0 0.0 0.0 0.0 16 0.08912650293467646 0.0 0.0 0.0 0.0 17 0.09831855521324515 0.0 0.0 0.0 0.0 18 0.11485514827280882 0.0 0.0 0.0 0.0 19 0.12774222354652492 0.0 0.0 0.0 0.0 20 0.14052008631792143 0.0 0.0 0.0 0.0 21 0.15472681266133304 0.0 0.0 0.0 0.0 22 0.1699801588186411 0.0 0.0 0.0 0.0 23 0.18704461230608296 0.0 0.0 0.0 0.0 24 0.20566534395157954 0.0 0.0 0.0 0.0 25 0.22330316307619946 0.0 0.0 0.0 0.0 26 0.2433527582937112 0.0 0.0 0.0 0.0 27 0.2663692931575728 0.0 0.0 0.0 0.0 28 0.2889489780121559 0.0 0.0 0.0 0.0 29 0.31145585453185926 0.0 0.0 0.0 0.0 30 0.3387134749024664 0.0 0.0 0.0 0.0 31 0.36665367341257127 0.0 0.0 0.0 0.0 32 0.39690553655510824 0.0 0.0 0.0 0.0 33 0.42085947873054663 0.0 0.0 0.0 0.0 34 0.4393891999574435 0.0 0.0 0.0 0.0 35 0.45759128367738156 0.0 0.0 0.0 9.101041859969004E-6 36 0.4757478621880197 0.0 0.0 0.0 1.8202083719938008E-5 37 0.49508757614045384 0.0 0.0 0.0 1.8202083719938008E-5 38 0.5192144381112317 0.0 0.0 0.0 1.8202083719938008E-5 39 0.5488656324910107 0.0 0.0 0.0 1.8202083719938008E-5 40 0.5930875948886001 0.0 0.0 0.0 1.8202083719938008E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACAATA 248060 0.0 43.685722 4 TAGGGGC 164820 0.0 43.65423 9 TGACAAT 85285 0.0 43.65105 3 TCGACAA 13920 0.0 43.455463 2 TTACAAT 145565 0.0 43.451378 3 TTAACAA 36230 0.0 43.435272 2 ATAGGGG 764895 0.0 43.42575 8 CAACAAT 68655 0.0 43.400333 3 TAGGGAT 47840 0.0 43.360577 9 CGAACAA 10320 0.0 43.34787 2 AACAATA 275280 0.0 43.347248 4 ACAATAG 1161215 0.0 43.34014 5 AATAGGG 1138100 0.0 43.338863 7 GAACAAT 49385 0.0 43.336033 3 CAATAGG 1153800 0.0 43.33461 6 CGTACAA 16565 0.0 43.30637 2 ATAGGGC 76170 0.0 43.30353 8 ATTACAA 31455 0.0 43.279926 2 TTGACAA 31570 0.0 43.275257 2 CATATGC 8770 0.0 43.272522 37 >>END_MODULE