##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528024_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 11236418 Sequences flagged as poor quality 0 Sequence length 59 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.36007070936663 31.0 31.0 34.0 30.0 34.0 2 31.937149899549837 33.0 31.0 34.0 30.0 34.0 3 32.18115087922148 34.0 31.0 34.0 30.0 34.0 4 35.82050418558654 37.0 35.0 37.0 35.0 37.0 5 35.74651477009844 37.0 35.0 37.0 35.0 37.0 6 35.914704045363926 37.0 35.0 37.0 35.0 37.0 7 35.82998336302548 37.0 35.0 37.0 35.0 37.0 8 35.87711083727928 37.0 35.0 37.0 35.0 37.0 9 37.77753132715426 39.0 37.0 39.0 35.0 39.0 10 37.419358998570544 39.0 37.0 39.0 34.0 39.0 11 37.223231371421036 39.0 37.0 39.0 34.0 39.0 12 37.599346784713774 39.0 37.0 39.0 35.0 39.0 13 37.710864440963306 39.0 37.0 39.0 35.0 39.0 14 38.111031914263066 40.0 38.0 40.0 34.0 40.0 15 37.603486538147656 40.0 37.0 40.0 33.0 40.0 16 36.79582238752599 39.0 35.0 40.0 32.0 40.0 17 36.686104059140554 39.0 35.0 40.0 31.0 40.0 18 36.58230861472045 39.0 35.0 40.0 31.0 40.0 19 36.74596530673743 39.0 35.0 40.0 31.0 40.0 20 36.84391431504239 39.0 35.0 40.0 31.0 40.0 21 36.75892735567509 39.0 35.0 40.0 31.0 40.0 22 36.74449134946742 39.0 35.0 40.0 31.0 40.0 23 36.723853544786245 39.0 35.0 40.0 31.0 40.0 24 36.707925782041926 39.0 35.0 40.0 31.0 40.0 25 36.66922519258362 39.0 35.0 40.0 31.0 40.0 26 36.54341766210548 39.0 35.0 40.0 31.0 40.0 27 36.468191731564275 39.0 35.0 40.0 30.0 40.0 28 36.46751233355683 39.0 35.0 40.0 30.0 40.0 29 36.43411192072064 39.0 35.0 40.0 30.0 40.0 30 36.406073358965465 39.0 35.0 40.0 30.0 40.0 31 36.405365927113074 39.0 35.0 40.0 30.0 40.0 32 36.28398142539731 38.0 35.0 40.0 30.0 40.0 33 36.12847670850265 38.0 35.0 40.0 30.0 40.0 34 36.00522719962892 38.0 35.0 40.0 30.0 40.0 35 35.84100653784863 38.0 35.0 40.0 30.0 40.0 36 35.67245807338246 38.0 34.0 40.0 29.0 40.0 37 35.55615188043022 38.0 34.0 40.0 29.0 40.0 38 35.24953005486268 38.0 34.0 40.0 27.0 40.0 39 35.12769131586241 38.0 34.0 40.0 27.0 40.0 40 35.009098718114615 37.0 34.0 40.0 27.0 40.0 41 34.91112131997937 37.0 34.0 40.0 27.0 40.0 42 34.80747743631467 37.0 34.0 40.0 27.0 40.0 43 34.59862306653241 36.0 33.0 40.0 26.0 40.0 44 34.43134395676629 36.0 33.0 40.0 26.0 40.0 45 34.20429900347246 36.0 33.0 40.0 25.0 40.0 46 34.018153383044314 35.0 33.0 39.0 24.0 40.0 47 33.89391734981735 35.0 33.0 39.0 24.0 40.0 48 33.697073569174805 35.0 33.0 39.0 23.0 40.0 49 33.56405163994433 35.0 33.0 39.0 24.0 40.0 50 33.36493160008821 35.0 32.0 39.0 23.0 40.0 51 33.18582283072773 35.0 32.0 38.0 23.0 40.0 52 33.00224083867297 35.0 32.0 38.0 23.0 40.0 53 32.79338406598971 35.0 32.0 38.0 23.0 40.0 54 32.62495761549633 35.0 31.0 37.0 22.0 40.0 55 32.47353364746666 35.0 31.0 37.0 22.0 40.0 56 32.25956172153795 35.0 31.0 37.0 21.0 40.0 57 32.10821544730714 35.0 31.0 36.0 21.0 39.0 58 31.907013605225437 35.0 31.0 36.0 20.0 39.0 59 31.386481439191744 34.0 30.0 35.0 20.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 3.0 12 12.0 13 13.0 14 70.0 15 260.0 16 1126.0 17 2988.0 18 6823.0 19 12887.0 20 21298.0 21 32842.0 22 47630.0 23 65602.0 24 88014.0 25 113905.0 26 145203.0 27 181349.0 28 220344.0 29 264264.0 30 314864.0 31 380884.0 32 470056.0 33 602281.0 34 901888.0 35 1310264.0 36 1269159.0 37 1908405.0 38 2385974.0 39 488008.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.94092227612038 19.77295611466216 33.80286315443231 17.483258454785148 2 22.753585706761708 21.580934422339933 35.6143479176371 20.05113195326126 3 22.230883543136258 21.207870693311694 35.855697073569175 20.705548689982876 4 21.40118852823026 23.725701553644587 31.561979983300724 23.311129934824425 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 0.0 100.0 0.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 100.0 0.0 0.0 11 99.54569151841805 0.39326589665852585 0.03906939026298239 0.0219731946604336 12 99.27301565320906 0.6365907711870455 0.051929360406492535 0.038464215197405435 13 98.55313321380532 0.8337176491654191 0.20885659469058554 0.4042925423386705 14 66.55341586615948 20.03216683466208 6.460546412566709 6.953870886611729 15 40.238864378309884 25.569233896424997 14.810333684631527 19.38156804063359 16 34.92530270767784 15.87082289035527 23.81567684648257 25.38819755548432 17 25.907918341948477 15.556220852588432 26.384502605723636 32.151358199739455 18 23.655376651171217 18.11496332728099 31.297384985143843 26.93227503640395 19 28.66370759791955 16.90994407648416 28.501298189512 25.925050136084295 20 31.70277218238054 17.37166595261942 25.084248378798296 25.841313486201738 21 32.92025981945492 18.041327761213584 22.679131374429108 26.35928104490239 22 32.26752511343028 19.68891687724682 22.299312823713038 25.74424518560986 23 30.407261460013324 22.05426142032096 20.607465831192822 26.931011288472895 24 30.385911239685104 24.94250391895353 19.612647019717492 25.058937821643873 25 30.14661789904932 21.84578750986302 23.035170104921338 24.972424486166318 26 28.978683420285716 20.830908924890476 23.149138809182784 27.04126884564102 27 31.41924766415774 21.051646530059667 21.60553300882897 25.92357279695362 28 33.07289743048007 20.203422478587036 20.038138488617992 26.6855416023149 29 32.093955564842815 19.17540803483815 18.656114430773226 30.07452196954581 30 29.11980490579827 18.25183078806787 21.453206884969926 31.175157421163934 31 26.921862465422702 18.527799517604276 21.685095730685706 32.86524228628732 32 28.420685310923822 23.933054110304546 18.678630503066014 28.96763007570562 33 32.22522515627311 22.829410582625176 18.708791360378367 26.236572900723342 34 31.11930332246451 20.775001428391146 21.78229752577734 26.323397723367002 35 33.05844442597276 21.426232096385164 20.59087691468936 24.924446562952713 36 36.22011925864631 20.14810235788665 19.85865958350784 23.773118799959203 37 35.59144916111167 20.013201716062895 19.806080549869183 24.589268572956257 38 30.756803458183917 23.48752956680679 23.406480606186065 22.349186368823233 39 29.690840977970023 26.050695159258048 23.57014486289136 20.68831899988057 40 30.535478477215783 28.585132735361036 18.87696773117554 22.00242105624764 41 31.333366202645717 26.698196880892112 18.13599316080979 23.83244375565238 42 32.29358323978335 25.870878068081836 17.294061150092492 24.541477542042312 43 32.10445713215724 24.474525600596202 17.32737247759918 26.093644789647374 44 31.111925526444463 23.29445202198779 18.831294812991114 26.762327638576632 45 27.670241530708452 24.036352154218545 20.267304046538676 28.02610226853433 46 27.638549936465516 23.369173343319908 19.7022218290562 29.290054891158373 47 28.287635792830063 19.466016661181527 22.098608293141105 30.147739252847305 48 29.917514638561858 18.801276349811836 20.56923300646167 30.711976005164637 49 30.662930125952954 20.370023614287046 20.881289749099757 28.085756510660246 50 28.961765217349516 23.129755407817687 19.921393098761545 27.987086276071256 51 27.486739991338876 22.598678689240646 22.07204288768894 27.842538431731533 52 28.7908922576572 21.712070519270465 23.023467087109076 26.47357013596326 53 29.97447229179263 21.547098016467526 21.97501908526365 26.50341060647619 54 28.42246523758728 20.850185530655764 22.234381099029957 28.492968132726997 55 26.512719622926095 21.917536353667156 23.092296851185136 28.47744717222161 56 26.230325358134593 21.318350741312756 24.107656016356817 28.343667884195835 57 26.849143561586974 20.258057327521993 25.75688266492044 27.135916445970594 58 26.892547073275487 20.736038833727974 24.636899410470487 27.73451468252605 59 26.95413253583126 20.641142043665518 22.50926407330165 29.895461347201575 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.5 2 1.0 3 27.5 4 91.0 5 128.0 6 217.5 7 307.0 8 568.0 9 1216.0 10 1603.0 11 2012.5 12 2422.0 13 3046.0 14 3881.0 15 4092.0 16 4978.5 17 5865.0 18 6955.5 19 12136.5 20 16227.0 21 22400.5 22 28574.0 23 35521.0 24 42468.0 25 47713.0 26 57173.5 27 61389.0 28 65736.5 29 70084.0 30 73964.0 31 80035.5 32 82227.0 33 91960.0 34 101693.0 35 108256.5 36 122739.5 37 130659.0 38 150244.0 39 169829.0 40 200350.5 41 230872.0 42 242751.0 43 282288.5 44 309947.0 45 329567.0 46 349187.0 47 376453.0 48 439206.5 49 474694.0 50 517735.0 51 560776.0 52 616286.0 53 772208.5 54 872621.0 55 956582.0 56 1040543.0 57 1037287.0 58 978033.0 59 922035.0 60 822913.0 61 723791.0 62 666208.5 63 608626.0 64 567288.0 65 465403.0 66 404856.0 67 357159.5 68 309463.0 69 271472.5 70 191931.5 71 150381.0 72 122334.5 73 94288.0 74 68133.0 75 33325.0 76 24672.0 77 17929.5 78 11187.0 79 7302.0 80 3417.0 81 2866.0 82 1423.5 83 532.0 84 453.5 85 375.0 86 269.5 87 218.0 88 272.0 89 150.5 90 29.0 91 14.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 1.1236418E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.714320359350879 #Duplication Level Percentage of deduplicated Percentage of total 1 79.2939400106809 9.288746158402665 2 7.680222643195436 1.7993717694706381 3 3.198044733950498 1.1238876161109352 4 1.9169533579931075 0.8982322299785875 5 1.158636185700424 0.6786317729615561 6 0.776081765979213 0.5454762259038767 7 0.5032439886121366 0.41266129110640654 8 0.35274894105594135 0.33057712815608614 9 0.27080952681846626 0.28551145981641635 >10 1.7336995327405396 4.32345297798018 >50 0.6873686612557969 6.035870657942402 >100 2.2372172838013746 58.58825556995356 >500 0.17410244695083932 13.173885539587518 >1k 0.016930921265403426 2.5154396026294714 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.019285505398606566 0.0 0.0 0.0 0.0 11 0.020771744162597014 0.0 0.0 0.0 0.0 12 0.027989346782933848 0.0 0.0 0.0 0.0 13 0.03366731283937639 0.0 8.89963331730806E-6 0.0 0.0 14 0.0518937618732233 0.0 8.89963331730806E-6 0.0 0.0 15 0.07465902389889732 0.0 8.89963331730806E-6 0.0 0.0 16 0.08555217507928238 0.0 8.89963331730806E-6 0.0 0.0 17 0.09445180839659044 0.0 8.89963331730806E-6 0.0 0.0 18 0.10967908100250454 0.0 8.89963331730806E-6 0.0 0.0 19 0.1218893779138512 0.0 8.89963331730806E-6 0.0 0.0 20 0.13353009829289014 0.0 8.89963331730806E-6 0.0 0.0 21 0.14794750426692918 0.0 8.89963331730806E-6 0.0 0.0 22 0.16248060547409326 0.0 8.89963331730806E-6 0.0 0.0 23 0.17858004214510353 0.0 8.89963331730806E-6 0.0 0.0 24 0.195667338114335 0.0 8.89963331730806E-6 0.0 0.0 25 0.21246094618409533 0.0 8.89963331730806E-6 0.0 0.0 26 0.23145276368323073 0.0 8.89963331730806E-6 0.0 0.0 27 0.2530877722776066 0.0 8.89963331730806E-6 0.0 0.0 28 0.2736548248739055 0.0 8.89963331730806E-6 0.0 0.0 29 0.29431977343669485 0.0 8.89963331730806E-6 0.0 0.0 30 0.3197994236241478 0.0 8.89963331730806E-6 0.0 0.0 31 0.34501208481208157 0.0 8.89963331730806E-6 0.0 0.0 32 0.3739002945600635 0.0 8.89963331730806E-6 0.0 0.0 33 0.397110538251603 0.0 8.89963331730806E-6 0.0 0.0 34 0.4165740363165557 0.0 8.89963331730806E-6 0.0 0.0 35 0.4347114890172295 0.0 8.89963331730806E-6 0.0 0.0 36 0.4523060640855475 0.0 8.89963331730806E-6 0.0 0.0 37 0.4705325131193945 0.0 8.89963331730806E-6 0.0 0.0 38 0.4929595890790108 0.0 8.89963331730806E-6 0.0 0.0 39 0.5213494193612235 0.0 8.89963331730806E-6 0.0 0.0 40 0.5625280227204079 0.0 8.89963331730806E-6 0.0 0.0 41 0.5972988900911305 0.0 8.89963331730806E-6 0.0 0.0 42 0.624816556308247 0.0 8.89963331730806E-6 0.0 0.0 43 0.648738770665171 0.0 8.89963331730806E-6 0.0 0.0 44 0.6730258699881048 0.0 8.89963331730806E-6 0.0 0.0 45 0.6971349766446923 0.0 8.89963331730806E-6 0.0 0.0 46 0.7222764407660875 0.0 8.89963331730806E-6 0.0 0.0 47 0.7444721262594538 0.0 8.89963331730806E-6 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACTA 30 7.016042E-7 53.0 21 TCGACAA 14245 0.0 50.65602 2 GACAATA 253980 0.0 50.25484 4 TAGGGGC 165430 0.0 50.207912 9 TGACAAT 86340 0.0 50.16707 3 CAACAAT 70955 0.0 49.96364 3 TTACAAT 148675 0.0 49.898605 3 ATAGGGG 776580 0.0 49.881413 8 GAACAAT 49390 0.0 49.861206 3 TAGGGAT 49555 0.0 49.860962 9 AACAATA 281950 0.0 49.821316 4 AATAGGG 1166065 0.0 49.806316 7 CAATAGG 1182185 0.0 49.798534 6 ACAATAG 1190560 0.0 49.792114 5 TTAACAA 37750 0.0 49.79192 2 CGAACAA 10230 0.0 49.787876 2 TAACAAT 95670 0.0 49.689926 3 CACAATA 280165 0.0 49.62702 4 TAGGGGA 183020 0.0 49.59737 9 ATAGGGC 80070 0.0 49.554703 8 >>END_MODULE