##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528019_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 159267 Sequences flagged as poor quality 0 Sequence length 52 %GC 39 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.206131841498866 31.0 31.0 34.0 28.0 34.0 2 31.770982061569566 33.0 31.0 34.0 30.0 34.0 3 32.04651936684938 33.0 31.0 34.0 30.0 34.0 4 35.795952708345105 37.0 35.0 37.0 35.0 37.0 5 35.48504712212825 37.0 35.0 37.0 33.0 37.0 6 35.83689653223831 37.0 35.0 37.0 35.0 37.0 7 35.67393747606221 37.0 35.0 37.0 33.0 37.0 8 35.423063158093015 37.0 35.0 37.0 32.0 37.0 9 37.156887490817304 39.0 37.0 39.0 33.0 39.0 10 37.75390382188401 39.0 37.0 39.0 35.0 39.0 11 38.25973993357067 39.0 39.0 39.0 37.0 39.0 12 38.23077599251571 39.0 39.0 39.0 37.0 39.0 13 38.17027381692378 39.0 39.0 39.0 37.0 39.0 14 38.543584044403424 40.0 39.0 40.0 35.0 40.0 15 37.806212209685626 40.0 37.0 40.0 33.0 40.0 16 36.568215637891086 38.0 35.0 40.0 31.0 40.0 17 36.2792920065048 38.0 35.0 40.0 31.0 40.0 18 36.24545574412779 39.0 35.0 40.0 30.0 40.0 19 36.548789140248765 39.0 35.0 40.0 31.0 40.0 20 36.67406305135402 39.0 35.0 40.0 31.0 40.0 21 36.8093955433329 39.0 35.0 40.0 32.0 40.0 22 36.85971356275939 39.0 35.0 40.0 32.0 40.0 23 36.820697319595396 39.0 35.0 40.0 32.0 40.0 24 36.859638217584305 39.0 35.0 40.0 32.0 40.0 25 36.8830266156831 39.0 35.0 40.0 32.0 40.0 26 36.64923681616405 39.0 35.0 40.0 31.0 40.0 27 36.395850992358746 39.0 35.0 40.0 31.0 40.0 28 35.72943547627569 38.0 35.0 40.0 30.0 40.0 29 35.48445691825676 37.0 35.0 40.0 29.0 40.0 30 35.16931944470606 36.0 35.0 40.0 29.0 40.0 31 35.04013386326106 35.0 34.0 40.0 28.0 40.0 32 34.88255570833883 35.0 34.0 40.0 26.0 40.0 33 34.60311929024845 35.0 34.0 40.0 25.0 40.0 34 34.33017511474442 35.0 33.0 40.0 23.0 40.0 35 33.974257065179856 35.0 33.0 40.0 21.0 40.0 36 33.259733654806084 35.0 33.0 40.0 18.0 40.0 37 33.13499971745559 35.0 33.0 40.0 18.0 40.0 38 32.772470128777464 35.0 33.0 40.0 16.0 40.0 39 32.23087645274916 35.0 32.0 40.0 15.0 40.0 40 31.52525005179981 35.0 30.0 40.0 10.0 40.0 41 30.673981427414343 35.0 26.0 40.0 9.0 40.0 42 29.650756277194898 35.0 22.0 39.0 8.0 40.0 43 28.837342324524226 35.0 18.0 39.0 8.0 40.0 44 28.002982413180384 35.0 15.0 39.0 8.0 40.0 45 27.099210759291 34.0 10.0 38.0 8.0 40.0 46 26.701224986971564 33.0 10.0 38.0 8.0 40.0 47 26.272611400980743 33.0 10.0 38.0 8.0 40.0 48 25.849121286895592 33.0 10.0 37.0 8.0 40.0 49 25.451688045860095 33.0 9.0 37.0 8.0 40.0 50 25.040177814613198 32.0 9.0 36.0 8.0 40.0 51 24.74931404496851 31.0 9.0 36.0 8.0 40.0 52 24.07844060602636 30.0 9.0 35.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 0.0 14 0.0 15 6.0 16 28.0 17 67.0 18 181.0 19 373.0 20 690.0 21 1023.0 22 1401.0 23 1949.0 24 2644.0 25 3562.0 26 4720.0 27 6096.0 28 7260.0 29 8734.0 30 10389.0 31 10386.0 32 8558.0 33 7033.0 34 7764.0 35 12248.0 36 10339.0 37 17518.0 38 25409.0 39 10887.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.118392385114305 24.738332485700113 37.15835672173144 5.984918407454149 2 28.10688968838491 21.771616216793184 35.55224873953801 14.569245355283893 3 18.390501484927828 22.398864799362077 37.27828112540577 21.932352590304333 4 19.70904204888646 19.693345137410763 38.773882850810274 21.8237299628925 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 100.0 0.0 0.0 0.0 8 0.0 0.0 0.0 100.0 9 0.0 100.0 0.0 0.0 10 0.0 0.0 100.0 0.0 11 98.15655471629402 1.057971833462048 0.5167423257799796 0.2687311244639505 12 98.04102544783288 1.242567512416257 0.3993294279417582 0.31707761180910043 13 95.26267211663433 2.235240194139401 1.3285865873030822 1.1735011019231856 14 58.64366127320788 20.173042752108095 11.719314107756158 9.463981866927863 15 41.61753533374773 32.439237255677575 17.883177306033264 8.06005010454143 16 39.01247590524088 33.20775804152775 17.699209503538082 10.080556549693283 17 25.542014353255855 40.36492179798703 16.46794376738433 17.62512008137279 18 19.771201818330226 49.18407454149322 18.242950517056265 12.801773123120293 19 20.498910634343588 50.41534027764697 19.398871078126668 9.686878009882776 20 16.895527635982344 48.7790942254202 21.45579435790214 12.86958378069531 21 17.93215166983744 48.68805213886116 14.402858093641496 18.976938097659904 22 19.535120269735724 52.11060671702236 15.351579423232684 13.00269359000923 23 15.555011395957733 53.824709450168584 16.06610283360646 14.554176320267223 24 16.034709010655064 53.098256387073285 14.344465582951898 16.522569019319757 25 20.07258251866363 52.96075144254616 12.01818330225345 14.948482736536759 26 17.272881387858124 56.589249499268526 13.484902710542674 12.652966402330678 27 16.918759064966377 53.652671300394935 13.311608807850966 16.11696082678772 28 15.248607683952105 55.37305279813144 13.131408264109954 16.2469312538065 29 17.562332435469997 55.29080098199878 15.19272667909862 11.954139903432601 30 20.62260229677209 57.5467610992861 12.075320060024989 9.755316543916818 31 17.15044547834768 57.05387807894918 11.886957122316613 13.90871932038652 32 17.663420545373494 59.17986776921773 14.257190755147017 8.899520930261762 33 17.171165401495603 57.24161314019853 15.801138967896676 9.786082490409187 34 14.732493234631153 61.23616317253418 13.700264335989251 10.331079256845422 35 18.731438402179986 58.860278651572514 11.838610634971463 10.569672311276033 36 17.022358680705985 57.73763554283059 12.726427948036944 12.513577828426477 37 15.3496957938556 59.93080801421512 13.016506872107843 11.702989319821432 38 15.610264524352187 57.149315300721426 16.037848392950202 11.202571781976179 39 16.93006084122888 55.95886153440449 14.257818631606046 12.853258992760585 40 20.088279430139323 55.18217835458695 12.845096598793221 11.884445616480502 41 20.964794966942303 51.81801628711534 15.129311156736799 12.087877589205547 42 22.18601467975161 51.14116546428325 13.206753439193305 13.466066416771834 43 23.061902340095564 48.772187584370904 13.696497077235085 14.469412998298456 44 24.933602064457798 46.65436028806972 12.402443695178537 16.009593952293947 45 23.761356715452667 44.73682558219845 15.083476175227762 16.418341527121125 46 24.23854282431389 41.927706304507524 19.079281960481456 14.75446891069713 47 27.524848210866033 43.608531585325274 14.75132952840199 14.115290675406708 48 26.245235987367128 40.91117431734132 14.44680944577345 18.396780249518105 49 25.47294794276278 43.20292339279324 13.57971205585589 17.744416608588097 50 26.373322785008824 41.804014642079025 14.985527447619408 16.83713512529275 51 24.757168779470952 43.79689452303365 15.219725366836819 16.22621133065858 52 27.480896858734077 40.68325516271418 14.962296018635374 16.873551959916366 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 21.0 10 42.0 11 105.5 12 169.0 13 245.0 14 434.0 15 547.0 16 725.5 17 904.0 18 1203.5 19 1503.0 20 2099.0 21 2695.0 22 3635.5 23 4576.0 24 6052.0 25 7528.0 26 8865.0 27 10202.0 28 10472.0 29 10742.0 30 10665.5 31 10589.0 32 9955.5 33 9322.0 34 8657.0 35 7992.0 36 7687.0 37 7382.0 38 7846.0 39 8085.5 40 7861.0 41 8316.0 42 8771.0 43 8020.0 44 7269.0 45 7491.0 46 7713.0 47 7963.0 48 8213.0 49 7687.0 50 7161.0 51 7171.5 52 7182.0 53 6601.5 54 6021.0 55 5195.0 56 4369.0 57 4075.0 58 3781.0 59 3394.0 60 3007.0 61 2593.0 62 2179.0 63 1881.0 64 1037.5 65 492.0 66 424.5 67 357.0 68 280.5 69 204.0 70 182.0 71 160.0 72 106.0 73 52.0 74 48.0 75 44.0 76 27.5 77 11.0 78 8.0 79 5.0 80 4.5 81 4.0 82 2.5 83 1.0 84 1.0 85 1.0 86 1.5 87 2.0 88 1.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 159267.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.84750764439589 #Duplication Level Percentage of deduplicated Percentage of total 1 90.2507481168094 54.91533085950009 2 4.0057785574244145 4.874832827892784 3 1.5086162418739038 2.7538661492964644 4 0.8771024662057579 2.1347799606949334 5 0.5984934475286349 1.8208417311809728 6 0.4540295119182747 1.6575938518337132 7 0.3085336910535549 1.3141454287454402 8 0.2713858218966051 1.3210520697947472 9 0.21979155917861934 1.2036391719565258 >10 1.3909813228768961 13.823328121958722 >50 0.025797131358992878 1.1414794025127617 >100 0.08358270560313694 10.511907677045466 >500 0.004127541017438861 1.6820810337358023 >1k 0.0010318852543597153 0.8451217138515826 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TTTTTAGCATGGGTATCGCAATAGCTTCGACTTTCACTTCTTCAATGCCCGT 1346 0.8451217138515826 No Hit TCTTTAGCATGGGCATAAGATCATCTGCAATACTAGTTAAAATGCTGCTTCC 772 0.48472062636955554 No Hit TTTCTAGCATGGGGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGG 733 0.46023344446746656 No Hit CTCATAGCATGGCCTATAAAGAACCAGGCGTTTCCCCCTGGAAGCTCTCTCG 599 0.37609799895772505 No Hit TGCTTAGCATGGGCTGGGCATGGTGGCGTGTGCCTGTAATCCCAGCTACTCG 575 0.361028963941055 No Hit TACGTAGCATGGGATCGTGTGGTTGGCGTGCTGGAGGATTCCAGTGTCGTCG 473 0.29698556512020696 No Hit GGTTTAGCATGGGGAAGAGCTGCAGTCCTTCGTTGGAGCTCTGCAGTCCTTC 457 0.2869395417757602 No Hit ATTTTAGCATGGGTATCAACGCAGAGTTCTCTAGCATAGGGCAACAGCGTAA 442 0.2775213948903414 No Hit CCTTTAGCATGGGAACCCCGCCAGCCTAGCCGGGTCCTCAACGACAGGAGCA 434 0.27249838321811803 No Hit AATTTAGCATAGGCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCAGAT 423 0.2655917421688109 No Hit CCTATAGCATGGGGCTCAGGGCACCCCAAGAAGGCCTGGGCTTCTCACTATG 386 0.24236031318477777 No Hit GTCATAGCATGGGGCGCGGTGGCTTACACCTGTAATCCCAGCACTTTGGGAG 360 0.22603552525005177 No Hit ATGATAGCATGGGGCATGGGTACAAAAATTAGCTGGGCGAGGTGGTGCACGC 356 0.2235240194139401 No Hit CCTCTAGCATGGGATCTTGGATATGATATGGCGCACTACACATGCTAGCCGC 353 0.22164039003685637 No Hit CTGGTAGCATGGGTCACATCGACAAGTTAATTCACCATGATCAAGTAGGCTT 346 0.2172452548236609 No Hit TCACTAGCATGGGAGACCCGCAGCGCGCTCCATCCTTTGCCCTTCAGTGCTG 312 0.19589745521671154 No Hit TAGCTAGCATGGAGGTGGGGGATTGATACAGAGGGGGCTCATGGGAGCCCTC 304 0.19087444354448818 No Hit CGAGTAGCATGGGAGCTTTCCACTGTCATTCGCCATAGAAGCCGATACCGTG 284 0.17831691436392974 No Hit AAATTAGCATAAGCAGCTTGCAGACCCATAATGTCAATAGATGTGGTAGAAG 282 0.17706116144587392 No Hit ATTCTAGCATGGGGGCAAGGATCGGTACGCCGGATTTGAACACGAGTTCGGG 276 0.1732939026917064 No Hit TGCTTAGCATGGGGGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAA 273 0.1714102733146226 No Hit GATCTAGCATGGTCACTCATTAGGCACCGGGATCTCGACCGATGCCCTTGAG 273 0.1714102733146226 No Hit AAGTTAGCATGGGGCGGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGC 260 0.16324787934725965 No Hit CTTTTAGCATGGGTGGGAATTCAGATAAAACGAACAGCTCGTAACCAAACAT 257 0.16136424997017587 No Hit GACTTAGCATGGGGGGAATTCCTCTGTGTCATGATCGTGAGTTGTCGCAGTG 252 0.15822486767503627 No Hit GCACTAGCATGGGGTGGAGACGAATTGCCAGAATTATTAACTGCGCAGTTAG 239 0.15006247370767328 No Hit GGCATAGCATGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACT 239 0.15006247370767328 No Hit CTTCTAGCATGGGAACTTTAAAAACTTCTTTACAGCAAAAGAAACAATCAAC 236 0.14817884433058953 No Hit CTTCTAGCATGGGAAATGCCCGGTGTGTAAAGCTGGCATCAGCAGGGAGAAG 235 0.14755096787156158 No Hit TCGGTAGCATGGGGGGGAATTCACACCGGCGCACGCCACAGGCGTCATACTT 233 0.14629521495350575 No Hit TTAATAGCATGGGACTCCCAAATGTGTGAACCCATTCAAGTGCGCGAGCAAG 228 0.14315583265836615 No Hit CCTTTAGCATCAACAGGCCACAACCAACCAGAACGTGAAAAAGCGTCCTGCG 226 0.1419000797403103 No Hit CGCTTAGCATTTTTTTAAGGATAAGACAGAGAGAGAGAAAGAGGTTGGGTAT 226 0.1419000797403103 No Hit GGTGTAGCATGGGGGGAATTCTCCAGATTACTTCCATTTCCGCCCAAGCTGC 223 0.14001645036322655 No Hit CAGATAGCATGGGTGATGAACTGTCGCCAAGTCAGCTGAAGTCATTGGCAAC 212 0.1331098093139194 No Hit GGCTTAGCATGGGGGGGAATTCGAGCTCGCATTTTGAAAATTCTATGGAAGA 207 0.12997042701877978 No Hit TATTTAGCATGGGTCCACCTTGTTAGAAGTGACATCACTGTACATTAAAGAC 206 0.12934255055975186 No Hit TTTTTAGCATGATGGGGCTCCTGCCGCTCCTGGTGCTGCTTGTGCGCTCCCT 206 0.12934255055975186 No Hit ATTGTAGCATTGTGCCAATTCATCCATTAACTTCTCAGTAACAGATACAAAC 204 0.12808679764169603 No Hit CTTTTAGCATGGGTGGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGA 201 0.12620316826461225 No Hit TTCTTAGCATGGGGGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAA 199 0.1249474153465564 No Hit TTGGTAGCATGGGGCCGTGGCAGACTCGACTTCGTGATGACACTGCTCTACA 199 0.1249474153465564 No Hit TGCTTAGCATGGGGAGGGGAATTCGAGCTCGCATTTTGAAAATTCTATGGAA 195 0.12243590951044472 No Hit CTAATAGCATGGGGCAAAGGGTTTTTGTGAATTACGGTGGTGGGTAAGACCC 191 0.11992440367433303 No Hit CATATAGCATGGGGATAATGGGATTAAGATATGATCACAGAGAGACATAAAT 189 0.1186686507562772 No Hit ATGGTAGCATGGGGGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAA 187 0.11741289783822136 No Hit TGGTTAGCATGGATACACACAATCCTCCATTCTCCCTGTTTCCCTGTTCCTC 186 0.11678502137919343 No Hit GCAATAGCATGGGAGTGATGGACCTTTGTTCTGTGGTTTTTGTTTTTGTGTT 184 0.11552926846113759 No Hit TTCTTAGCATGGGGCTCTGTTCTCCCGGTTCCTTCGAGCTCGTCGTCTCTGC 180 0.11301776262502589 No Hit GAAGTAGCATGGGAAGACCTATGTAAAGAAACGGGTCACTCCATCGATGTTC 166 0.104227492198635 No Hit CACATAGCATGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACT 165 0.10359961573960708 No Hit GGTTTAGCATGAGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACT 164 0.10297173928057915 No Hit GCTTTAGCATGGGGGGGAAGGTGCTATATTGCTTATTGTGGACAAGGTTTCG 161 0.10108810990349537 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.040184093377786986 0.0 0.0 0.0 0.0 12 0.059020387148624634 0.0 0.0 0.0 0.0 13 0.09920448052641162 0.0 0.0 0.0 0.0 14 0.24675544839797323 0.0 0.0 0.0 0.0 15 0.48472062636955554 0.0 0.0 0.0 0.0 16 0.648596382175843 0.0 0.0 0.0 0.0 17 0.8143557673592144 0.0 0.0 0.0 0.0 18 0.9631624881488319 0.0 0.0 0.0 0.0 19 1.1264103674960915 0.0 0.0 0.0 0.0 20 1.3154011816634958 0.0 0.0 0.0 0.0 21 1.4786490610107554 0.0 0.0 0.0 0.0 22 1.6958943158344164 0.0 0.0 0.0 0.0 23 1.907488682526826 0.0 0.0 0.0 0.0 24 2.157383513219939 0.0 0.0 0.0 0.0 25 2.4487181902088944 0.0 0.0 0.0 0.0 26 2.814142289363145 0.0 0.0 0.0 0.0 27 3.1613579712055855 0.0 0.0 0.0 0.0 28 3.5362002172452547 0.0 0.0 0.0 0.0 29 3.977597367941884 0.0 0.0 0.0 0.0 30 4.467341005983663 0.0 0.0 0.0 0.0 31 4.891785492286537 0.0 0.0 0.0 0.0 32 5.230210903702588 0.0 0.0 0.0 0.0 33 5.53159160403599 0.0 0.0 0.0 0.0 34 5.784625817024242 0.0 0.0 0.0 0.0 35 6.024474624372909 0.0 0.0 0.0 0.0 36 6.213465438540313 0.0 0.0 0.0 0.0 37 6.382364206018824 0.0 0.0 0.0 0.0 38 6.561308996841781 0.0 0.0 0.0 0.0 39 6.7515555639272415 0.0 0.0 0.0 0.0 40 6.926733095996032 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACAAG 35 1.01215846E-7 46.000004 20 TTGTCGC 35 1.01215846E-7 46.000004 42 TGGCATC 35 1.01215846E-7 46.000004 34 CCAATTC 35 1.01215846E-7 46.000004 15 GGATGCT 35 1.01215846E-7 46.000004 11 ACACGAG 35 1.01215846E-7 46.000004 40 CAATGCC 105 0.0 46.000004 43 CATGAGG 35 1.01215846E-7 46.000004 8 GGCATCA 35 1.01215846E-7 46.000004 35 CCTATAA 105 0.0 46.000004 13 GGCATAA 105 0.0 46.000004 12 CTATAAA 105 0.0 46.000004 14 CACATCG 35 1.01215846E-7 46.000004 15 TACAGCA 35 1.01215846E-7 46.000004 31 TCGACAA 35 1.01215846E-7 46.000004 19 GATACAG 35 1.01215846E-7 46.000004 25 GCCTATA 105 0.0 46.000004 12 ACCATGA 35 1.01215846E-7 46.000004 34 TAAAATG 105 0.0 46.000004 38 GGCGCAG 35 1.01215846E-7 46.000004 12 >>END_MODULE