##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528011_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2564383 Sequences flagged as poor quality 0 Sequence length 52 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.932376715958576 33.0 31.0 34.0 30.0 34.0 2 32.411046633829656 34.0 31.0 34.0 30.0 34.0 3 32.489450288821914 34.0 31.0 34.0 31.0 34.0 4 36.06537712970332 37.0 35.0 37.0 35.0 37.0 5 36.00922015159202 37.0 35.0 37.0 35.0 37.0 6 35.938718592347556 37.0 35.0 37.0 35.0 37.0 7 36.019280661274074 37.0 35.0 37.0 35.0 37.0 8 36.051046197077426 37.0 36.0 37.0 35.0 37.0 9 37.684168082536814 39.0 38.0 39.0 35.0 39.0 10 38.02046262200303 39.0 38.0 39.0 35.0 39.0 11 38.2195284401745 39.0 39.0 39.0 37.0 39.0 12 38.16489892500457 39.0 39.0 39.0 37.0 39.0 13 38.159627481542344 39.0 39.0 39.0 37.0 39.0 14 38.817299911908634 40.0 39.0 40.0 36.0 40.0 15 38.25210664709601 40.0 38.0 40.0 34.0 40.0 16 37.59916634917639 40.0 36.0 40.0 33.0 40.0 17 37.542902132793735 40.0 37.0 40.0 33.0 40.0 18 37.53419048558659 40.0 37.0 40.0 33.0 40.0 19 37.693083287480846 40.0 37.0 40.0 33.0 40.0 20 37.74293738493821 40.0 37.0 40.0 33.0 40.0 21 37.5460693663934 40.0 37.0 40.0 33.0 40.0 22 37.648068560741514 40.0 37.0 40.0 33.0 40.0 23 37.60015840067572 40.0 37.0 40.0 33.0 40.0 24 37.57801974198082 40.0 37.0 40.0 33.0 40.0 25 37.67213360874721 40.0 37.0 40.0 33.0 40.0 26 37.64314651906521 40.0 37.0 40.0 33.0 40.0 27 37.62755290453883 40.0 37.0 40.0 33.0 40.0 28 37.61994210693177 40.0 37.0 40.0 33.0 40.0 29 37.607300859504996 40.0 37.0 40.0 33.0 40.0 30 37.562643333698595 40.0 36.0 40.0 33.0 40.0 31 37.53156256300248 40.0 36.0 40.0 33.0 40.0 32 37.476109067951235 40.0 36.0 40.0 33.0 40.0 33 37.43081825140784 40.0 36.0 40.0 33.0 40.0 34 37.360571724270514 40.0 36.0 40.0 33.0 40.0 35 37.28165956489339 40.0 35.0 40.0 33.0 40.0 36 37.22191497915873 40.0 35.0 40.0 33.0 40.0 37 37.109999949305546 40.0 35.0 40.0 33.0 40.0 38 36.90723616558057 39.0 35.0 40.0 32.0 40.0 39 36.796497247096084 39.0 35.0 40.0 32.0 40.0 40 36.67848913364345 39.0 35.0 40.0 32.0 40.0 41 36.540308526456464 39.0 35.0 40.0 31.0 40.0 42 36.40992706627676 39.0 35.0 40.0 31.0 40.0 43 36.25162582968301 38.0 35.0 40.0 31.0 40.0 44 36.097616463687366 38.0 35.0 40.0 31.0 40.0 45 35.931061779773145 38.0 35.0 40.0 30.0 40.0 46 35.80209430494587 38.0 35.0 40.0 30.0 40.0 47 35.69941424506402 37.0 35.0 40.0 30.0 40.0 48 35.530333417434136 37.0 35.0 40.0 30.0 40.0 49 35.40532946911596 37.0 35.0 40.0 30.0 40.0 50 35.25991749282381 36.0 34.0 40.0 29.0 40.0 51 35.09067444293618 36.0 34.0 40.0 29.0 40.0 52 34.413993931483716 35.0 33.0 39.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 7.0 14 7.0 15 19.0 16 35.0 17 134.0 18 276.0 19 581.0 20 1104.0 21 1930.0 22 2975.0 23 4743.0 24 6878.0 25 9796.0 26 13596.0 27 18800.0 28 24978.0 29 32786.0 30 42702.0 31 53950.0 32 67070.0 33 86532.0 34 129298.0 35 250055.0 36 211713.0 37 395023.0 38 764445.0 39 444948.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.280935024136408 21.813005311609068 32.3827992932413 20.523260371013222 2 22.829546132539484 18.852020154555696 34.82950869663385 23.48892501627097 3 20.25181105942443 22.072872889892032 32.23707223141005 25.438243819273488 4 28.790668164622836 21.27533211692637 40.34155584403734 9.592443874413457 5 0.0 0.0 0.0 100.0 6 0.0 0.0 0.0 100.0 7 0.0 100.0 0.0 0.0 8 0.0 0.0 100.0 0.0 9 0.0 0.0 0.0 100.0 10 0.0 0.0 100.0 0.0 11 99.28013873122697 0.44205565237329997 0.17107428960494592 0.10673132679478844 12 99.19224234445478 0.4286021237857216 0.09448666599334031 0.28466886576615114 13 98.45475500344527 0.8525637551021046 0.27199525187930196 0.42068598957332043 14 64.4122192355822 22.771481483070197 5.6624147017040745 7.153884579643524 15 36.2782002532383 26.928855791042132 16.742623859228516 20.05032009649105 16 31.190114737151198 17.0218723178246 27.383234095686955 24.404778849337248 17 24.668000060833347 16.382693224841997 28.89736049568259 30.051946218642065 18 24.50211220398825 18.739010514420038 31.617897950501156 25.140979331090556 19 25.462460170731127 18.72524501995217 28.202612480273032 27.60968232904367 20 27.126291197531728 17.833373563933314 26.919067861547987 28.12126737698698 21 28.35988227967507 19.189918198646613 22.42617424932235 30.024025272355964 22 29.492045454988585 19.41749730831939 22.998904609802825 28.0915526268892 23 27.916383785105424 20.386229358095108 22.30240178631663 29.394985070482843 24 28.419584750015893 23.451138149020643 20.857921769096112 27.271355331867355 25 30.870661675732524 20.443124135513298 22.985919030035685 25.70029515871849 26 29.16580713567357 19.693197155027153 22.060004297330003 29.080991411969272 27 30.719592198201283 20.294940342374755 21.99878099332276 26.9866864661012 28 31.311508460319693 21.780014919768227 20.737229969158275 26.171246650753805 29 30.707776490485234 20.469836214013274 20.55469093345261 28.267696362048884 30 29.99399855637789 20.608622035008032 20.686106560525474 28.711272848088605 31 27.79151944151868 19.82344291004893 20.302973463792267 32.082064184640124 32 29.12185894228748 21.653590746780026 20.571888052603686 28.65266225832881 33 30.39386082344174 20.84396129595306 20.01151934012977 28.750658540475428 34 27.63947507061153 23.10392012425601 22.051932180177456 27.204672624955005 35 30.0972202670194 24.021684748339077 19.672724394133017 26.20837059050852 36 33.40881607778557 22.48884039552594 18.805654225597344 25.296689301091142 37 32.556525292828724 21.191725261008205 20.18817001984493 26.063579426318146 38 29.76462564289344 24.20387282242941 23.065314346569917 22.966187188107238 39 31.70130982774414 23.717479019319658 22.627002284760117 21.954208868176085 40 30.248250748815604 24.75550649025516 20.276456363967473 24.719786396961766 41 30.710389204732678 24.126115326766712 20.293614487383515 24.869880981117095 42 30.998723669592255 25.216826035736474 19.19319384038968 24.591256454281595 43 31.119493461000168 22.90515886277518 20.405259276792897 25.570088399431757 44 29.569179018890708 22.695712769894357 21.23481554822349 26.50029266299145 45 28.38909008521738 24.133017571868166 21.57478036627134 25.903111976643117 46 26.784493579937163 23.080990632054572 21.80902774663535 28.325488041372914 47 28.885193826351212 20.056754392772064 23.75136631306634 27.30668546781039 48 29.08559290870357 20.00758077089109 22.422196684348634 28.484629636056702 49 28.407574063624665 21.865064617882744 22.928985256882456 26.798376061610142 50 30.17072722756312 21.02260075815508 22.354773058470595 26.451898955811203 51 28.721996675223632 21.78719013501493 22.063552909218316 27.427260280543113 52 29.10676759282837 22.45401720413838 22.502059949703302 25.93715525332994 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 5.5 10 11.0 11 16.0 12 21.0 13 133.0 14 380.0 15 515.0 16 814.5 17 1114.0 18 1219.5 19 1325.0 20 1651.0 21 1977.0 22 2380.5 23 2784.0 24 3684.5 25 4585.0 26 6630.5 27 8676.0 28 10319.5 29 11963.0 30 13727.0 31 15491.0 32 16881.5 33 18272.0 34 19767.5 35 21263.0 36 23896.5 37 26530.0 38 29311.5 39 37397.5 40 42702.0 41 47084.5 42 51467.0 43 55030.5 44 58594.0 45 67255.0 46 75916.0 47 82604.5 48 89293.0 49 108021.0 50 126749.0 51 133295.5 52 139842.0 53 147260.5 54 154679.0 55 167795.0 56 180911.0 57 196991.0 58 213071.0 59 226129.0 60 239187.0 61 240097.0 62 241007.0 63 227640.0 64 186871.0 65 159469.0 66 141977.5 67 124486.0 68 106032.5 69 87579.0 70 80797.0 71 74015.0 72 68864.0 73 63713.0 74 49530.0 75 35347.0 76 30901.0 77 26455.0 78 19235.5 79 12016.0 80 8437.5 81 4859.0 82 3194.0 83 1529.0 84 914.0 85 299.0 86 171.5 87 44.0 88 29.5 89 8.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2564383.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 6.8850446106852665 #Duplication Level Percentage of deduplicated Percentage of total 1 73.29526563848357 5.046411736729863 2 8.603299608970215 1.1846820321370208 3 4.115192070548626 0.849998429617967 4 2.4814824885222393 0.6834047053643962 5 1.604408350867526 0.5523211534739448 6 1.0510043622322658 0.43417271519963807 7 0.7646008348281303 0.3685017600011213 8 0.5291634763300285 0.29146513127020346 9 0.4038503300790981 0.25024747847711043 >10 2.816608307510849 4.013300562047151 >50 0.7327773590527015 3.7199558303163944 >100 3.0194301909955366 52.4127731520189 >500 0.4968754720792806 22.494394793716197 >1k 0.08604150949996717 7.698370519630086 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCGCCATCTGGGAATTCCTCGTTCATGGGGAATAATTGCAATCCCCGATCC 3661 0.14276338596847662 No Hit TTTGCCATCTGGGTGGCCAACTTAGCCATAGGCCCCGTTGGCTGTCCTGTCT 2894 0.11285365719551253 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.001208867786130231 0.0 0.0 0.0 0.0 12 0.0021057696919687895 0.0 0.0 0.0 0.0 13 0.003041667332843807 0.0 0.0 0.0 0.0 14 0.010996797280281455 0.0 0.0 0.0 0.0 15 0.024255347192677537 0.0 0.0 0.0 0.0 16 0.0326784259605527 0.0 0.0 0.0 0.0 17 0.037669880045219456 0.0 0.0 0.0 0.0 18 0.046287937488276906 0.0 0.0 0.0 0.0 19 0.054672020521115604 0.0 0.0 0.0 0.0 20 0.06609777088679811 0.0 0.0 0.0 0.0 21 0.07814745301306396 0.0 0.0 0.0 0.0 22 0.09191294748093401 0.0 0.0 0.0 0.0 23 0.1037286551969811 0.0 0.0 0.0 0.0 24 0.11827406436558034 0.0 0.0 0.0 0.0 25 0.1338333626451275 0.0 0.0 0.0 0.0 26 0.15114746900131532 0.0 0.0 0.0 0.0 27 0.16799362653706565 0.0 0.0 0.0 0.0 28 0.1846058096625972 0.0 0.0 0.0 0.0 29 0.2074573103939622 0.0 0.0 0.0 0.0 30 0.23588520123554088 0.0 0.0 0.0 0.0 31 0.26212933091507784 0.0 0.0 0.0 0.0 32 0.28143221975812505 0.0 0.0 0.0 0.0 33 0.29706950950774513 0.0 0.0 0.0 0.0 34 0.31247282484714645 0.0 0.0 0.0 0.0 35 0.3311127861945739 0.0 0.0 0.0 0.0 36 0.34811492667047006 0.0 0.0 0.0 0.0 37 0.36308928892447034 0.0 0.0 0.0 0.0 38 0.3825481607076634 0.0 0.0 0.0 0.0 39 0.40364485336238776 0.0 0.0 0.0 0.0 40 0.4279002005550653 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCAAT 215 0.0 46.000004 34 CTACGAA 75 0.0 46.000004 40 TACTCGC 75 0.0 46.000004 46 AGCGTTA 25 3.4183417E-5 46.0 44 AGGTATA 50 1.6370905E-11 46.0 34 AACGTAC 20 6.3129154E-4 46.0 21 CTATGCG 60 0.0 46.0 41 TCGTTTA 30 1.8623068E-6 46.0 23 TCGTTGA 20 6.3129154E-4 46.0 29 ACCGGAT 90 0.0 46.0 42 ACCGGAC 50 1.6370905E-11 46.0 25 CATATCG 60 0.0 46.0 33 CGTATGT 40 5.6152203E-9 46.0 39 CTCGTAC 60 0.0 46.0 16 CTACTAC 20 6.3129154E-4 46.0 34 CGAGTAT 55 1.8189894E-12 46.0 37 TTTACGC 40 5.6152203E-9 46.0 28 CGAAACT 25 3.4183417E-5 46.0 34 ACGTTAT 20 6.3129154E-4 46.0 37 CGCATAA 45 3.110472E-10 46.0 44 >>END_MODULE