SRR1528009_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1528009_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2597157
Sequences flagged as poor quality	0
Sequence length	59
%GC	56

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCGCCATCTGGGAATTCCTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCAC	3490	0.13437770608399877	No Hit
TTTGCCATCTGGGTGGCCAACTTAGCCATAGGCCCCGTTGGCTGTCCTGTCTGCCCTGC	2627	0.10114906414976069	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTTACG	25	1.4792526E-5	53.000004	27
AACCGTA	30	7.013932E-7	53.000004	47
AACGTAC	25	1.4792526E-5	53.000004	21
TCGCATA	120	0.0	53.000004	30
TCGTTGA	15	0.006697211	53.000004	29
CGAACTA	25	1.4792526E-5	53.000004	34
CATATCG	50	3.6379788E-12	53.000004	33
CGAAACG	15	0.006697211	53.000004	49
ACGTTGT	45	7.6397555E-11	53.000004	34
ACGTTAT	15	0.006697211	53.000004	37
TAGGTTA	25	1.4792526E-5	53.000004	50
GTTTACG	15	0.006697211	53.000004	27
GACCGTA	25	1.4792526E-5	53.000004	21
CGCATAA	25	1.4792526E-5	53.000004	44
ACATTAC	15	0.006697211	53.000004	39
GAATCGT	45	7.6397555E-11	53.000004	19
TAAACGA	30	7.013932E-7	53.000004	37
TAACGTG	15	0.006697211	53.000004	48
TAACGAC	30	7.013932E-7	53.000004	43
CCGTCTA	15	0.006697211	53.000004	41