##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528009_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2597157 Sequences flagged as poor quality 0 Sequence length 59 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.537753782308886 31.0 31.0 34.0 30.0 34.0 2 32.00210114367364 33.0 31.0 34.0 30.0 34.0 3 32.148079226631275 34.0 31.0 34.0 30.0 34.0 4 35.8449623954193 37.0 35.0 37.0 35.0 37.0 5 35.65510286825171 37.0 35.0 37.0 33.0 37.0 6 35.572466739592564 37.0 35.0 37.0 33.0 37.0 7 35.72741347558118 37.0 35.0 37.0 33.0 37.0 8 35.75796726959518 37.0 35.0 37.0 33.0 37.0 9 37.41627826119099 39.0 37.0 39.0 34.0 39.0 10 37.74546937285655 39.0 37.0 39.0 35.0 39.0 11 37.99520360147654 39.0 37.0 39.0 35.0 39.0 12 37.93374755550011 39.0 37.0 39.0 35.0 39.0 13 37.927953527645805 39.0 38.0 39.0 35.0 39.0 14 38.35284813355527 40.0 38.0 40.0 35.0 40.0 15 37.76381327736444 40.0 38.0 40.0 33.0 40.0 16 37.139132520675496 39.0 36.0 40.0 32.0 40.0 17 37.01846519097613 39.0 36.0 40.0 32.0 40.0 18 36.96869499995572 39.0 36.0 40.0 32.0 40.0 19 37.11929775519924 40.0 36.0 40.0 32.0 40.0 20 37.25446555599065 40.0 36.0 40.0 32.0 40.0 21 37.21664458482872 40.0 36.0 40.0 32.0 40.0 22 37.235469784845506 40.0 36.0 40.0 32.0 40.0 23 37.18451637694602 40.0 36.0 40.0 32.0 40.0 24 37.139789392786035 39.0 36.0 40.0 32.0 40.0 25 37.08011144493768 39.0 36.0 40.0 32.0 40.0 26 36.9255135519339 39.0 35.0 40.0 31.0 40.0 27 36.81217346506199 39.0 35.0 40.0 31.0 40.0 28 36.82248319989897 39.0 35.0 40.0 31.0 40.0 29 36.777483609962744 39.0 35.0 40.0 31.0 40.0 30 36.73508186066533 39.0 35.0 40.0 31.0 40.0 31 36.736675911390805 39.0 35.0 40.0 31.0 40.0 32 36.609114504822 39.0 35.0 40.0 31.0 40.0 33 36.502185659165 39.0 35.0 40.0 31.0 40.0 34 36.435056871802516 39.0 35.0 40.0 30.0 40.0 35 36.30866443576572 39.0 35.0 40.0 30.0 40.0 36 36.160778112374416 38.0 35.0 40.0 30.0 40.0 37 36.036918445823645 38.0 35.0 40.0 30.0 40.0 38 35.81606387291951 38.0 35.0 40.0 29.0 40.0 39 35.66963722254758 38.0 34.0 40.0 29.0 40.0 40 35.51597881837717 38.0 34.0 40.0 28.0 40.0 41 35.39112729804167 38.0 34.0 40.0 28.0 40.0 42 35.29562517783869 38.0 34.0 40.0 28.0 40.0 43 35.10330372788399 37.0 34.0 40.0 27.0 40.0 44 34.94879901369074 37.0 34.0 40.0 27.0 40.0 45 34.72551948149457 37.0 33.0 40.0 26.0 40.0 46 34.54719217975656 36.0 33.0 40.0 26.0 40.0 47 34.467737606929425 36.0 33.0 40.0 26.0 40.0 48 34.26898181357538 36.0 33.0 39.0 25.0 40.0 49 34.18249378069943 36.0 33.0 39.0 26.0 40.0 50 33.97430190011617 35.0 33.0 39.0 24.0 40.0 51 33.80128617561434 35.0 33.0 39.0 24.0 40.0 52 33.600505860831674 35.0 33.0 39.0 24.0 40.0 53 33.384278270431864 35.0 32.0 38.0 24.0 40.0 54 33.231780365992506 35.0 32.0 38.0 23.0 40.0 55 33.079850005217246 35.0 32.0 38.0 23.0 40.0 56 32.883957727622935 35.0 32.0 38.0 23.0 40.0 57 32.732047773777246 35.0 32.0 37.0 23.0 40.0 58 32.58466392289723 35.0 31.0 37.0 23.0 40.0 59 32.01596899994879 34.0 31.0 36.0 22.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 6.0 14 15.0 15 51.0 16 190.0 17 583.0 18 1225.0 19 2215.0 20 3788.0 21 5887.0 22 8796.0 23 12065.0 24 16857.0 25 22045.0 26 28483.0 27 35744.0 28 44859.0 29 54682.0 30 66002.0 31 80252.0 32 99390.0 33 126896.0 34 185390.0 35 265007.0 36 293830.0 37 440236.0 38 634201.0 39 168461.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.331891757025087 22.150412932294813 31.896839505659457 20.620855805020643 2 22.438035128411567 19.38954787869967 34.60738030084435 23.565036692044416 3 20.175599703829995 22.266231883555747 32.02898400058217 25.52918441203208 4 28.819667043617308 21.511907058371904 40.12094763620374 9.547478261807045 5 0.0 0.0 0.0 100.0 6 0.0 0.0 0.0 100.0 7 0.0 100.0 0.0 0.0 8 0.0 0.0 100.0 0.0 9 0.0 0.0 0.0 100.0 10 0.0 0.0 100.0 0.0 11 99.27439889078713 0.4489139470582641 0.16556565506051427 0.11112150709410328 12 99.18522445889872 0.43305044708502416 0.08567060058363819 0.2960544934326265 13 98.44526149170035 0.8690656745048528 0.2649050480968228 0.4207677856979767 14 64.06489865649246 23.0087745946818 5.737889546146036 7.1884372026797 15 36.314131182673975 27.030633881586674 16.791822750800204 19.863412184939147 16 31.23257469610039 17.153063907957815 27.274785467339864 24.339575928601928 17 24.68372146928353 16.501120263426508 28.814738577606207 30.00041968968376 18 24.41893193210884 18.81334089544837 31.6708231346815 25.09690403776129 19 25.525757588008734 18.7990175411036 28.192057700015827 27.48316717087184 20 27.120847911774298 18.026441990222388 26.949044666918482 27.903665431084836 21 28.035039853193318 19.37791977920472 22.53414021562809 30.052900151973873 22 29.40781015548925 19.588188161131576 22.97419832532265 28.029803358056522 23 27.865392812217358 20.530949803958716 22.377199376087006 29.226458007736923 24 28.389696887789224 23.545592353484984 20.895040230529 27.169670528196793 25 30.78562443471842 20.60141146646121 23.017976964811908 25.594987134008456 26 29.194191956820475 19.686256934024396 22.125462573113598 28.994088536041524 27 30.666686688559835 20.413706217991443 22.067399082920286 26.852208010528432 28 31.11667873755803 21.936871740907463 20.90647581182039 26.039973709714122 29 30.69005839847187 20.553897973822917 20.62894156957011 28.127102058135105 30 29.92487554660731 20.738946471083572 20.711916915303927 28.62426106700519 31 27.699249602546168 19.94742712897218 20.344861708398838 32.008461560082814 32 29.005293095488643 21.878808250714147 20.657203241852535 28.458695411944678 33 30.372210844396392 21.00462159199463 19.996596278161082 28.626571285447895 34 27.517127381979606 23.255659938925525 22.1070963364941 27.120116342600774 35 30.119588457686618 24.135660647392516 19.711746344175573 26.033004550745297 36 33.32393844499967 22.549041124583535 18.942790135521264 25.18423029489553 37 32.3499503495553 21.3752191338452 20.248949139385875 26.025881377213622 38 29.63290243909013 24.35609399046727 23.12975303379811 22.881250536644494 39 31.57541111299779 23.880458516755052 22.688424303960062 21.855706066287098 40 30.10503408149758 24.94442962054277 20.31317321209307 24.637363085866586 41 30.70053138874546 24.27569838866114 20.327304048234282 24.696466174359117 42 31.001937888237023 25.32684778009185 19.21839919573595 24.452815135935175 43 31.02715777290322 23.046315644375753 20.404272826017063 25.522253756703968 44 29.456709779193176 22.805898911771603 21.212079208149525 26.5253121008857 45 28.323509129405732 24.283553131366336 21.546213802246072 25.846723936981864 46 26.689530128521305 23.217695349183742 21.84492504688781 28.24784947540715 47 28.788286576437233 20.26361902649705 23.695024983087276 27.253069413978437 48 29.040870459506294 20.095666145712407 22.32903132155661 28.534432073224686 49 28.279537971712916 22.059698354777936 22.943010376346134 26.71775329716301 50 30.079198138579994 21.163603124493434 22.417936227960034 26.339262508966538 51 28.564888453027677 21.989352203197573 22.064434302585482 27.38132504118927 52 28.959897303089495 22.745140166728465 22.497831282436913 25.79713124774513 53 28.273415892839747 23.435510444690095 21.824210088184888 26.466863574285266 54 27.40754602051397 22.074137220044843 22.874319881316378 27.64399687812481 55 26.23845997758318 23.22270082247627 21.452380429831543 29.086458770109008 56 26.757643068940386 23.791746128555186 23.319807004351294 26.130803798153135 57 27.339048043687768 22.098047980926836 23.353497689974077 27.20940628541132 58 27.682230993351574 22.029511500459925 22.414432396655265 27.873825109533236 59 26.173311817498902 22.11029213867317 22.830194709060716 28.886201334767208 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 2.0 9 6.0 10 8.0 11 93.5 12 179.0 13 249.0 14 514.5 15 710.0 16 816.0 17 922.0 18 1001.5 19 1001.0 20 921.0 21 1444.5 22 1968.0 23 2186.0 24 2404.0 25 3361.0 26 6167.5 27 8017.0 28 8920.5 29 9824.0 30 11750.5 31 15025.0 32 16373.0 33 20171.0 34 23969.0 35 23901.5 36 27718.0 37 31602.0 38 33534.5 39 35467.0 40 39795.0 41 44123.0 42 45824.0 43 52200.0 44 56875.0 45 63449.0 46 70023.0 47 74063.5 48 85749.0 49 93394.0 50 104136.0 51 114878.0 52 117697.5 53 137277.0 54 154037.0 55 157038.5 56 160040.0 57 182067.5 58 211468.5 59 218842.0 60 225674.5 61 232507.0 62 207346.5 63 182186.0 64 163149.0 65 134957.5 66 125803.0 67 112312.5 68 98822.0 69 86530.5 70 71059.5 71 67880.0 72 61640.0 73 55400.0 74 43146.5 75 29537.5 76 28182.0 77 19244.5 78 10307.0 79 7440.5 80 4574.0 81 3888.0 82 1847.0 83 492.0 84 362.5 85 233.0 86 185.5 87 122.0 88 106.0 89 68.5 90 31.0 91 15.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 2597157.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.237941261614807 #Duplication Level Percentage of deduplicated Percentage of total 1 80.6930539543021 9.068238005587615 2 7.425065348155199 1.6688489649243927 3 3.1145669992146368 1.0500396297761394 4 1.7510834820583843 0.787142932622242 5 1.067390858429306 0.5997637885106574 6 0.7082074937755829 0.4775276529651261 7 0.47883199469461074 0.3766760081391922 8 0.3307065498076488 0.29731686252557193 9 0.23942783365445983 0.24216083379040507 >10 1.607785313977323 3.739313726823042 >50 0.44666863463473955 3.7124084762249354 >100 1.815513993449178 50.9204434204945 >500 0.27569170513231633 20.42050350255854 >1k 0.046005838714483674 6.639616195057639 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCGCCATCTGGGAATTCCTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCAC 3490 0.13437770608399877 No Hit TTTGCCATCTGGGTGGCCAACTTAGCCATAGGCCCCGTTGGCTGTCCTGTCTGCCCTGC 2627 0.10114906414976069 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 9.2408737708194E-4 0.0 0.0 0.0 0.0 12 0.0018096711134521326 0.0 0.0 0.0 0.0 13 0.0027337584905340723 0.0 0.0 0.0 0.0 14 0.010588501195730562 0.0 0.0 0.0 0.0 15 0.02418028636697743 0.0 0.0 0.0 0.0 16 0.03342116013779683 0.0 0.0 0.0 0.0 17 0.03838812978961226 0.0 0.0 0.0 0.0 18 0.04635838341694399 0.0 0.0 0.0 0.0 19 0.056446337283421834 0.0 0.0 0.0 0.0 20 0.06699633483844065 0.0 0.0 0.0 0.0 21 0.07743082147132423 0.0 0.0 0.0 0.0 22 0.09063757023545362 0.0 0.0 0.0 0.0 23 0.10141858963474291 0.0 0.0 0.0 0.0 24 0.1133162146146729 0.0 0.0 0.0 0.0 25 0.12582989784599083 0.0 0.0 0.0 0.0 26 0.142270952429907 0.0 0.0 0.0 0.0 27 0.1575954014331825 0.0 0.0 0.0 0.0 28 0.17334339048428724 0.0 0.0 0.0 0.0 29 0.1939043346243604 0.0 0.0 0.0 0.0 30 0.22154994865539512 0.0 0.0 0.0 0.0 31 0.2452296876931198 0.0 0.0 0.0 0.0 32 0.2657136245517695 0.0 0.0 0.0 0.0 33 0.28084555535148625 0.0 0.0 0.0 0.0 34 0.29663204804330273 0.0 0.0 0.0 0.0 35 0.3124185407351192 0.0 0.0 0.0 0.0 36 0.3285130625526297 0.0 0.0 0.0 0.0 37 0.34368349699305817 0.0 0.0 0.0 0.0 38 0.361241157157615 0.0 0.0 0.0 0.0 39 0.38030045930993006 0.0 0.0 0.0 0.0 40 0.4051353075690072 0.0 0.0 0.0 0.0 41 0.42827599563676744 0.0 0.0 0.0 0.0 42 0.4494529980282286 0.0 0.0 0.0 0.0 43 0.47005244580901345 0.0 0.0 0.0 0.0 44 0.48915025160204023 0.0 0.0 0.0 0.0 45 0.5079015246286612 0.0 0.0 0.0 0.0 46 0.5272303522659585 0.0 0.0 0.0 0.0 47 0.5442104578198391 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTTACG 25 1.4792526E-5 53.000004 27 AACCGTA 30 7.013932E-7 53.000004 47 AACGTAC 25 1.4792526E-5 53.000004 21 TCGCATA 120 0.0 53.000004 30 TCGTTGA 15 0.006697211 53.000004 29 CGAACTA 25 1.4792526E-5 53.000004 34 CATATCG 50 3.6379788E-12 53.000004 33 CGAAACG 15 0.006697211 53.000004 49 ACGTTGT 45 7.6397555E-11 53.000004 34 ACGTTAT 15 0.006697211 53.000004 37 TAGGTTA 25 1.4792526E-5 53.000004 50 GTTTACG 15 0.006697211 53.000004 27 GACCGTA 25 1.4792526E-5 53.000004 21 CGCATAA 25 1.4792526E-5 53.000004 44 ACATTAC 15 0.006697211 53.000004 39 GAATCGT 45 7.6397555E-11 53.000004 19 TAAACGA 30 7.013932E-7 53.000004 37 TAACGTG 15 0.006697211 53.000004 48 TAACGAC 30 7.013932E-7 53.000004 43 CCGTCTA 15 0.006697211 53.000004 41 >>END_MODULE