##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528007_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1648521 Sequences flagged as poor quality 0 Sequence length 52 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.14346192738825 31.0 31.0 33.0 30.0 34.0 2 31.816047839244995 33.0 31.0 34.0 30.0 34.0 3 32.19733506579534 33.0 31.0 34.0 30.0 34.0 4 35.82163769827621 37.0 35.0 37.0 35.0 37.0 5 35.82078663238139 37.0 35.0 37.0 35.0 37.0 6 35.879097688170184 37.0 35.0 37.0 35.0 37.0 7 36.15299774767807 37.0 35.0 37.0 35.0 37.0 8 35.911595909302946 37.0 35.0 37.0 35.0 37.0 9 36.46184974289075 37.0 35.0 39.0 32.0 39.0 10 37.11677740228969 39.0 37.0 39.0 33.0 39.0 11 38.04966087784141 39.0 38.0 39.0 35.0 39.0 12 38.17926553559221 39.0 39.0 39.0 37.0 39.0 13 38.03865889485181 39.0 39.0 39.0 37.0 39.0 14 38.1920582146057 40.0 38.0 40.0 34.0 40.0 15 36.876634267928644 39.0 35.0 40.0 31.0 40.0 16 36.93941539112938 39.0 36.0 40.0 32.0 40.0 17 36.907805845360784 39.0 36.0 40.0 31.0 40.0 18 37.136620036990735 39.0 36.0 40.0 32.0 40.0 19 37.30217752761415 39.0 36.0 40.0 33.0 40.0 20 37.3233850220895 39.0 36.0 40.0 33.0 40.0 21 37.398048311183175 40.0 36.0 40.0 33.0 40.0 22 37.35347199095432 40.0 36.0 40.0 33.0 40.0 23 37.307698840354476 40.0 36.0 40.0 32.0 40.0 24 37.28901178692901 40.0 36.0 40.0 32.0 40.0 25 37.245280466551534 39.0 36.0 40.0 32.0 40.0 26 37.00994103199171 39.0 35.0 40.0 32.0 40.0 27 36.79363138231178 39.0 35.0 40.0 32.0 40.0 28 36.37145417013189 38.0 35.0 40.0 31.0 40.0 29 36.37948985787867 39.0 35.0 40.0 31.0 40.0 30 36.381913242233495 39.0 35.0 40.0 31.0 40.0 31 36.27794186425287 39.0 35.0 40.0 31.0 40.0 32 36.099366644404284 38.0 35.0 40.0 30.0 40.0 33 36.00609516044988 38.0 35.0 40.0 30.0 40.0 34 35.906724269815186 38.0 35.0 40.0 30.0 40.0 35 35.67425043417706 38.0 35.0 40.0 29.0 40.0 36 35.03126438789679 38.0 35.0 40.0 26.0 40.0 37 34.93674693861953 37.0 34.0 40.0 26.0 40.0 38 34.654142106773286 37.0 34.0 40.0 24.0 40.0 39 34.293575878014295 37.0 34.0 40.0 23.0 40.0 40 33.8174084527889 35.0 33.0 40.0 21.0 40.0 41 33.35892051117335 35.0 33.0 40.0 18.0 40.0 42 32.76160206633704 35.0 33.0 40.0 15.0 40.0 43 32.38781550250194 35.0 32.0 39.0 13.0 40.0 44 32.06303589702527 35.0 32.0 39.0 11.0 40.0 45 31.547251142084328 35.0 31.0 39.0 10.0 40.0 46 31.403868679865163 35.0 31.0 39.0 10.0 40.0 47 31.16406281751946 35.0 30.0 38.0 10.0 40.0 48 30.821883373035586 35.0 29.0 38.0 9.0 40.0 49 30.50811848923975 35.0 28.0 37.0 9.0 40.0 50 30.092976067638812 35.0 27.0 37.0 9.0 40.0 51 29.81178644372744 35.0 26.0 37.0 8.0 40.0 52 29.202667724584643 35.0 24.0 36.0 8.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 3.0 14 1.0 15 12.0 16 64.0 17 178.0 18 520.0 19 1156.0 20 2293.0 21 4161.0 22 6666.0 23 10263.0 24 14773.0 25 20710.0 26 27578.0 27 35716.0 28 44293.0 29 54318.0 30 61573.0 31 62724.0 32 64879.0 33 77788.0 34 114786.0 35 172396.0 36 164679.0 37 278776.0 38 320186.0 39 108029.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.12253832374596 21.97466698938018 32.52600361172227 12.376791075151605 2 20.338412431506786 22.186371905483764 32.726001063984015 24.74921459902543 3 20.84692885319629 21.236186860828585 34.546905984212515 23.369978301762607 4 23.95468422907564 20.34162743453071 38.69062025900792 17.01306807738573 5 100.0 0.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 0.0 0.0 100.0 0.0 8 100.0 0.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 100.0 0.0 0.0 0.0 11 99.28269036305876 0.4320236138939086 0.21376737087364975 0.07151865217367569 12 98.52813521938756 0.7405425833216562 0.36396260648181006 0.3673595908089736 13 92.52669514067458 4.348321920072598 1.6984315031473667 1.4265514361054545 14 43.30548412789403 35.481440636788975 9.548983604091182 11.664091631225808 15 26.288897745312312 39.54666030945314 19.73223271041133 14.432209234823215 16 32.190248107242795 29.16511224303482 21.98801228495118 16.65662736477121 17 20.775774163629094 28.236704294334135 26.250196388156414 24.737325153880356 18 21.98655643452525 30.752595811639644 27.22300777484788 20.037839978987225 19 25.432493732260614 30.44613929698196 26.43854703701075 17.682819933746675 20 26.826895138126844 29.04087967335569 26.043465627674745 18.088759560842718 21 27.773197914979548 28.03409844339259 20.940345922193288 23.25235771943457 22 29.602595296025953 28.432334195318106 23.062551220154308 18.902519288501633 23 26.0130140895991 29.622734560251278 20.777048032751782 23.587203317397837 24 26.149924690070677 30.894116605126655 24.01024918699853 18.94570951780414 25 31.001121611432307 28.493965196682357 20.37402010650759 20.13089308537774 26 28.251323459027823 30.373043473513533 22.640597238373065 18.735035829085586 27 34.03814692078536 32.851325521482586 17.36890218565611 15.74162537207594 28 32.50738085835728 31.60056802430785 18.343048101904678 17.549003015430195 29 31.833625413325034 34.05858948718276 15.91899648230141 18.188788617190806 30 31.22404870790242 36.61651868553692 15.524824979481608 16.63460762707906 31 26.603846720787907 38.620678778129005 15.810414304701 18.96506019638209 32 23.519688253895463 42.75001652996838 17.33748008062985 16.39281513550631 33 23.794722663526883 43.244399070439506 15.6173321419624 17.343546124071214 34 21.317835805549336 44.099529214368516 16.73518262733687 17.84745235274528 35 23.788231997044623 42.992961569794986 17.324438087230916 15.894368345929472 36 24.23184175391154 43.12611122333291 16.705944297949497 15.936102724806053 37 23.14565601530099 43.235663967883944 17.17327228467214 16.445407732142932 38 23.399277291584397 42.17137664609672 17.663226613431068 16.76611944888782 39 24.51178965873046 41.922486883697566 17.1383925348843 16.42733092268767 40 25.33567967893645 41.95057266483108 17.793889189158037 14.919858467074427 41 27.19316284111637 40.99335100978392 16.831208095013654 14.982278054086057 42 26.28756321575521 40.31589527825245 16.575342382656938 16.8211991233354 43 24.953882904737036 40.549437950744945 17.542633669816762 16.954045474701264 44 25.57911000223837 40.883373642192 16.56945832051882 16.968058035050813 45 25.041233930292666 39.04748559466334 17.922671291418187 17.988609183625808 46 26.367513668312387 39.64341370234289 15.482908619301785 18.50616401004294 47 25.60009851254549 40.6942950681247 15.854089817478819 17.851516601850992 48 24.30948710996099 41.01009328968209 16.188268150663536 18.49215144969339 49 24.79725766308103 40.117656978588684 16.040317351128678 19.044768007201608 50 24.145157993134454 41.09532120003324 16.708795338366937 18.05072546846537 51 23.181263690301794 40.472823822080514 17.804868727786907 18.54104375983078 52 23.77161103801529 38.714217167994825 18.05939991058652 19.454771883403367 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 1.0 10 2.0 11 79.0 12 156.0 13 628.0 14 2138.0 15 3176.0 16 4258.5 17 5341.0 18 5575.5 19 5810.0 20 5944.0 21 6078.0 22 7414.5 23 8751.0 24 11271.5 25 13792.0 26 17150.0 27 20508.0 28 25338.5 29 30169.0 30 37427.5 31 44686.0 32 50283.0 33 55880.0 34 60827.0 35 65774.0 36 68007.0 37 70240.0 38 69943.5 39 68929.0 40 68211.0 41 66741.0 42 65271.0 43 62250.5 44 59230.0 45 60646.0 46 62062.0 47 64127.5 48 66193.0 49 73496.0 50 80799.0 51 82622.0 52 84445.0 53 89036.0 54 93627.0 55 91774.0 56 89921.0 57 95574.0 58 101227.0 59 98789.0 60 96351.0 61 95591.0 62 94831.0 63 89529.0 64 71295.0 65 58363.0 66 53464.5 67 48566.0 68 38491.0 69 28416.0 70 26857.5 71 25299.0 72 20719.5 73 16140.0 74 13679.5 75 11219.0 76 8908.5 77 6598.0 78 5260.0 79 3922.0 80 2866.0 81 1810.0 82 966.0 83 122.0 84 251.0 85 380.0 86 273.0 87 166.0 88 89.5 89 7.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1648521.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.01903052069263 #Duplication Level Percentage of deduplicated Percentage of total 1 82.74737654973934 26.494907752533496 2 6.178046542901247 3.9563012163082925 3 2.575680248491412 2.474123534639751 4 1.6298577260706846 2.087458571017758 5 1.2156284378099964 1.946162202603009 6 0.8726843065494972 1.6765503267802702 7 0.6943154230827462 1.5561914705871849 8 0.5593929623212817 1.4328976266900626 9 0.4551026611498392 1.3114751397664626 >10 2.522094047178958 13.670834851807365 >50 0.12396122139017106 2.8442975784395776 >100 0.37282381958028116 28.238438603911547 >500 0.04753601853247292 9.984255152658402 >1k 0.005500035202104306 2.3261059722568795 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCAAGCTGTGGGGAGCCAAGGTGGGTGGATCACTTGAGGCCAGGAGTTTGAG 1987 0.12053228317989277 No Hit CACTGCTGTGGGGCTGGGATACATGAGGATCAATGCCCGTTTTCTCCCCGTG 1809 0.10973472585426573 No Hit ACCTGCTGTGGGGGGGAGGGGCTGGAGAGATGGCTCATCGGTTAAGAGCTCT 1802 0.10931010281337028 No Hit TAGGGCTGTGGGGGGTATATGTGTGTGTGTGAGTGAGTGAGGGAGAGTGAGT 1758 0.10664104369917035 No Hit GTGGGCTGTGGGGGGCTCCTGAGACCCACCTCTGCTCTGTGCTGCTGCGTAG 1730 0.10494255153558857 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.009826990375008872 0.0 0.0 0.0 0.0 12 0.020017943356499552 0.0 0.0 0.0 0.0 13 0.06824298871533939 0.0 0.0 0.0 0.0 14 0.2516801423821717 0.0 0.0 0.0 0.0 15 0.38446583331361867 0.0 0.0 0.0 0.0 16 0.4754564849340712 0.0 0.0 0.0 0.0 17 0.5315673867666836 0.0 0.0 0.0 0.0 18 0.6008416028670548 0.0 0.0 0.0 0.0 19 0.6657482676896442 0.0 0.0 0.0 0.0 20 0.73393059597057 0.0 0.0 0.0 0.0 21 0.8061165129227956 0.0 0.0 0.0 0.0 22 0.8900705541512665 0.0 0.0 0.0 0.0 23 0.9897963083272825 0.0 0.0 0.0 0.0 24 1.1139075571375796 0.0 0.0 0.0 0.0 25 1.254154481501904 0.0 0.0 0.0 0.0 26 1.409202551863155 0.0 0.0 0.0 0.0 27 1.5714692139196285 0.0 0.0 0.0 0.0 28 1.7376788042129885 0.0 0.0 0.0 0.0 29 1.9158385000858345 0.0 0.0 0.0 0.0 30 2.117534444511171 0.0 0.0 0.0 0.0 31 2.3066130185784712 0.0 0.0 0.0 0.0 32 2.4719127023556267 0.0 0.0 0.0 0.0 33 2.6263541683727416 0.0 0.0 0.0 0.0 34 2.7732737405225656 0.0 0.0 0.0 0.0 35 2.909092453174694 0.0 0.0 0.0 0.0 36 3.0530396640382502 0.0 0.0 0.0 0.0 37 3.1957130057791194 0.0 0.0 0.0 0.0 38 3.3533088143857435 0.0 0.0 0.0 0.0 39 3.531893133299485 0.0 0.0 0.0 0.0 40 3.73340709642158 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAC 40 5.6134013E-9 46.000004 31 CTATGAT 75 0.0 46.000004 41 CCTTACA 20 6.3122547E-4 46.000004 30 TACCCGT 20 6.3122547E-4 46.000004 39 ACGCCTA 35 1.01992555E-7 46.000004 39 CATATGT 40 5.6134013E-9 46.000004 45 AATTTCG 40 5.6134013E-9 46.000004 26 CGTATAT 75 0.0 46.000004 44 GATAACG 35 1.01992555E-7 46.000004 13 GATAAAC 20 6.3122547E-4 46.000004 14 AGATATA 40 5.6134013E-9 46.000004 34 CAACGTC 170 0.0 46.000004 25 CCGATTG 40 5.6134013E-9 46.000004 30 CACGGAT 35 1.01992555E-7 46.000004 22 AGATAAT 70 0.0 46.000004 44 TAGACTA 20 6.3122547E-4 46.000004 23 ACTGACG 40 5.6134013E-9 46.000004 23 CTATCCA 20 6.3122547E-4 46.000004 17 ACGCAAC 35 1.01992555E-7 46.000004 36 CTATATC 20 6.3122547E-4 46.000004 38 >>END_MODULE