##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528006_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1667126 Sequences flagged as poor quality 0 Sequence length 59 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.87305938483354 31.0 31.0 33.0 30.0 34.0 2 31.61222247148686 31.0 31.0 34.0 30.0 34.0 3 31.972124482492625 31.0 31.0 34.0 30.0 34.0 4 35.667217114963115 37.0 35.0 37.0 33.0 37.0 5 35.54850923085598 37.0 35.0 37.0 33.0 37.0 6 35.62756444323944 37.0 35.0 37.0 33.0 37.0 7 35.9040678389036 37.0 35.0 37.0 35.0 37.0 8 35.70769395954475 37.0 35.0 37.0 33.0 37.0 9 35.962968605852225 37.0 35.0 39.0 32.0 39.0 10 36.68048905721583 38.0 35.0 39.0 32.0 39.0 11 37.81339382866082 39.0 37.0 39.0 35.0 39.0 12 37.974213106867744 39.0 38.0 39.0 35.0 39.0 13 37.75807947329716 39.0 38.0 39.0 35.0 39.0 14 37.49783519661981 40.0 37.0 40.0 32.0 40.0 15 36.098773578001904 38.0 35.0 40.0 30.0 40.0 16 36.2395085914322 38.0 35.0 40.0 30.0 40.0 17 36.05762311906838 38.0 35.0 40.0 30.0 40.0 18 36.26453789335659 38.0 35.0 40.0 30.0 40.0 19 36.5392693773596 39.0 35.0 40.0 30.0 40.0 20 36.68413185326124 39.0 35.0 40.0 31.0 40.0 21 36.74226243247361 39.0 35.0 40.0 31.0 40.0 22 36.72224474934708 39.0 35.0 40.0 31.0 40.0 23 36.715560791445874 39.0 35.0 40.0 31.0 40.0 24 36.67201939145571 39.0 35.0 40.0 31.0 40.0 25 36.598177342324455 39.0 35.0 40.0 30.0 40.0 26 36.184998614381875 38.0 35.0 40.0 30.0 40.0 27 35.88831438055672 38.0 35.0 40.0 30.0 40.0 28 35.63308532168534 38.0 34.0 40.0 29.0 40.0 29 35.48194797513805 38.0 34.0 40.0 29.0 40.0 30 35.39585550222359 38.0 34.0 40.0 28.0 40.0 31 35.2381085772761 38.0 34.0 40.0 27.0 40.0 32 34.968074998530405 37.0 33.0 40.0 26.0 40.0 33 34.83609757150929 37.0 33.0 40.0 25.0 40.0 34 34.75448706336534 37.0 33.0 40.0 25.0 40.0 35 34.592685255943465 37.0 33.0 40.0 24.0 40.0 36 34.231237470953005 37.0 33.0 40.0 23.0 40.0 37 33.932843108439315 36.0 33.0 40.0 22.0 40.0 38 33.545558644037705 35.0 33.0 40.0 21.0 40.0 39 33.1517059898292 35.0 32.0 39.0 20.0 40.0 40 32.64201805982271 35.0 31.0 39.0 18.0 40.0 41 32.17511033959041 35.0 31.0 39.0 15.0 40.0 42 31.748727450714583 35.0 30.0 39.0 14.0 40.0 43 31.3106819760474 35.0 30.0 38.0 10.0 40.0 44 30.972332625128516 35.0 29.0 38.0 10.0 40.0 45 30.642487730381507 35.0 28.0 38.0 10.0 40.0 46 30.310672378692434 35.0 26.0 38.0 9.0 40.0 47 30.022524992112174 35.0 26.0 37.0 9.0 40.0 48 29.655257011167723 34.0 24.0 37.0 9.0 40.0 49 29.382450396670677 34.0 24.0 36.0 9.0 40.0 50 28.97605040050962 34.0 23.0 36.0 8.0 39.0 51 28.615303222431898 34.0 23.0 36.0 8.0 39.0 52 28.273447237941223 33.0 22.0 35.0 8.0 39.0 53 27.850936881795377 33.0 20.0 35.0 8.0 39.0 54 27.417621703458526 33.0 20.0 35.0 8.0 38.0 55 27.02751141785324 33.0 18.0 35.0 8.0 38.0 56 26.490839324682117 33.0 15.0 35.0 8.0 38.0 57 26.051840112864895 32.0 13.0 35.0 8.0 37.0 58 25.61600143000589 32.0 10.0 35.0 8.0 37.0 59 24.96163037466874 31.0 10.0 35.0 8.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 3.0 14 17.0 15 72.0 16 309.0 17 966.0 18 2375.0 19 4969.0 20 8563.0 21 13428.0 22 19524.0 23 26949.0 24 35360.0 25 44478.0 26 54677.0 27 62958.0 28 63719.0 29 60898.0 30 65635.0 31 77196.0 32 91060.0 33 109249.0 34 145452.0 35 162959.0 36 167766.0 37 211397.0 38 202948.0 39 34197.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.15166340156653 22.35098006989274 32.062123678714144 12.435232849826587 2 19.8211173000721 22.65011762758184 32.56076625282072 24.967998819525338 3 20.943228046350427 21.46844329702734 34.379764936783424 23.20856371983881 4 23.734738706012624 20.428809820013605 38.63043345254048 17.20601802143329 5 100.0 0.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 0.0 0.0 100.0 0.0 8 100.0 0.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 100.0 0.0 0.0 0.0 11 99.27354021231749 0.4392589402360709 0.21480080089927217 0.0724000465471716 12 98.54486103629839 0.7490135718595955 0.3464045309112809 0.35972086093072747 13 92.54813373434281 4.3635574035795734 1.6524845752510608 1.4358242868265507 14 43.07472860479652 35.7654430438971 9.490404444535086 11.669423906771295 15 26.212175924315257 39.80245044465745 19.657782315193934 14.327591315833358 16 32.3775767398505 29.178598378286946 21.85983542935567 16.583989452506888 17 20.685898966244903 28.26169107793892 26.12783916752543 24.924570788290747 18 21.905842749738174 30.923037610834452 27.091113689067292 20.080005950360082 19 25.470960203367955 30.48203915001026 26.38678780128197 17.660212845339824 20 26.75484636434199 29.12437332271226 26.117462027465233 18.00331828548052 21 27.780443709713605 28.05570784691739 21.012149051721345 23.15169939164766 22 29.628894276737334 28.468694027925906 22.99364295200243 18.908768743334335 23 25.910878961758137 29.79720788950565 20.879825520086666 23.412087628649545 24 26.10816458983904 31.004735095007817 24.038554974249095 18.848545340904046 25 30.937673577162133 28.544033264432322 20.463420281370453 20.05487287703509 26 28.039752244281473 30.534524684996818 22.694865295124664 18.730857775597045 27 33.9291091375217 33.060728463235534 17.38632832791283 15.623834071329942 28 32.392692573926624 31.83274689495575 18.245111647230022 17.5294488838876 29 31.795497160982432 34.09970212209515 15.925490934698397 18.179309782224017 30 31.24676839063154 36.685109583798706 15.535658372552524 16.532463653017228 31 26.434234724909818 38.84043557595527 15.776851899616466 18.948477799518454 32 23.426243727228776 43.189297029738604 17.23109111128973 16.153368131742894 33 23.743856193233146 43.55903512991819 15.451621533105476 17.245487143743183 34 21.064154718959454 44.47906157063113 16.697478175014965 17.759305535394446 35 23.64866242863467 43.47853731511596 17.194561178939086 15.678239077310293 36 23.780985960269348 44.02324719307359 16.766099263043106 15.429667583613957 37 22.96341128385017 43.74018520495751 17.036564722762407 16.25983878842991 38 23.162796333330533 42.68129703453728 17.49543825721631 16.660468374915872 39 24.155522737933424 42.62131356598122 16.97094280816207 16.25222088792329 40 24.99193222347921 42.65190513494481 17.606827558324927 14.749335083251056 41 26.76324404993984 41.73697728905913 16.605883418529853 14.893895242471174 42 25.573951818878715 41.3109147119054 16.373987329092103 16.74114614012378 43 24.59976030605965 41.285301770831964 17.360715386839388 16.754222536269005 44 24.890200260808122 41.79432148499874 16.453045540648997 16.86243271354415 45 24.32425623498164 40.20098060974395 17.712218512577934 17.762544642696472 46 25.92689454786261 40.37853167666991 15.266632516078568 18.427941259388913 47 25.167623802879923 41.495003976903966 15.55725242123271 17.780119798983403 48 23.713384591206662 41.857004209639825 15.965319957819624 18.46429124133389 49 24.408652975240024 41.00709844366893 15.708110844651213 18.876137736439837 50 23.521677425701476 42.12938914035292 16.353952850594375 17.99498058335123 51 22.74447162362053 41.32657039719853 17.507914818675975 18.421043160504965 52 23.129685458687586 39.66712773959497 17.733032776166887 19.47015402555056 53 22.306172418881356 41.34924414831273 17.52123114869542 18.8233522841105 54 22.003855737358784 39.501153482100335 18.74387418827371 19.75111659226717 55 23.51220003766962 37.75875368748373 18.30305567785518 20.42599059699147 56 23.92320676421578 37.049089270996916 18.92166518907389 20.106038775713415 57 25.27385452569272 34.5565962020867 19.349287336410086 20.820261935810493 58 24.2032095954355 34.12465524501447 19.375680062574755 22.296455096975272 59 24.15714229158444 33.34780934374486 20.492872164431482 22.002176200239216 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 52.5 10 105.0 11 420.5 12 736.0 13 1416.0 14 2816.0 15 3536.0 16 3403.0 17 3270.0 18 2980.0 19 2858.5 20 3027.0 21 3720.0 22 4413.0 23 5007.5 24 5602.0 25 7418.0 26 12832.0 27 16430.0 28 21517.5 29 26605.0 30 34019.5 31 49493.0 32 57552.0 33 63369.5 34 69187.0 35 71007.0 36 72376.5 37 71926.0 38 70486.0 39 69046.0 40 67482.0 41 65918.0 42 64866.5 43 64331.0 44 64847.0 45 63834.0 46 62821.0 47 65997.5 48 68558.0 49 67942.0 50 63286.0 51 58630.0 52 62002.5 53 69076.5 54 72778.0 55 78646.0 56 84514.0 57 83314.5 58 84774.5 59 87434.0 60 84639.5 61 81845.0 62 77933.5 63 74022.0 64 62127.0 65 50301.0 66 50370.0 67 41031.5 68 31693.0 69 27014.5 70 21037.0 71 19738.0 72 15796.0 73 11854.0 74 9748.5 75 6462.0 76 5281.0 77 4536.5 78 3792.0 79 2738.0 80 1684.0 81 1143.5 82 709.5 83 816.0 84 457.5 85 99.0 86 62.5 87 17.0 88 8.0 89 5.0 90 2.0 91 2.5 92 1.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 1667126.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.49595253995337 #Duplication Level Percentage of deduplicated Percentage of total 1 89.26681748695606 37.042116218314085 2 4.533032874569733 3.7620503405038805 3 1.793941902304376 2.2332398411236816 4 0.9856051751032814 1.635945022768728 5 0.6213057960949653 1.2890837913777315 6 0.4335317759276469 1.0793888399073204 7 0.3367421377340269 0.9781405035929536 8 0.24675858846764293 0.8191586140703357 9 0.18304161172646974 0.6835937429734346 >10 1.1955514962781628 8.767842362356026 >50 0.08852970533636184 2.6582618426038906 >100 0.27704580348002883 27.348472213746906 >500 0.03350045136500056 9.224517548351544 >1k 0.004595194656261139 2.4781891183095976 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCAAGCTGTGGGGAGCCAAGGTGGGTGGATCACTTGAGGCCAGGAGTTTGAGACCAGCC 2069 0.12410579644250046 No Hit CACTGCTGTGGGGCTGGGATACATGAGGATCAATGCCCGTTTTCTCCCCGTGTGCTTTC 1897 0.1137886398508571 No Hit GTGGGCTGTGGGGGGCTCCTGAGACCCACCTCTGCTCTGTGCTGCTGCGTAGAGCTCTC 1740 0.10437123528755476 No Hit ACCTGCTGTGGGGGGGAGGGGCTGGAGAGATGGCTCATCGGTTAAGAGCTCTGACTACT 1737 0.10419128488188656 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.01007722271741908 0.0 0.0 0.0 0.0 12 0.02075428012039882 0.0 0.0 0.0 0.0 13 0.06568189806889221 0.0 0.0 0.0 0.0 14 0.23537513061400278 0.0 0.0 0.0 0.0 15 0.3575614560627091 0.0 0.0 0.0 0.0 16 0.4396788245159634 0.0 0.0 0.0 0.0 17 0.4927042107195257 0.0 0.0 0.0 0.0 18 0.5581461749141936 0.0 0.0 0.0 0.0 19 0.6146506022940078 0.0 0.0 0.0 0.0 20 0.6723546990449432 0.0 0.0 0.0 0.0 21 0.7317983163840046 0.0 0.0 0.0 0.0 22 0.8106165940666752 0.0 0.0 0.0 0.0 23 0.9028111852373486 0.0 0.0 0.0 0.0 24 1.0182793622077755 0.0 0.0 0.0 0.0 25 1.1377664315714588 0.0 0.0 0.0 0.0 26 1.277827830649873 0.0 0.0 0.0 0.0 27 1.4155498744546002 0.0 0.0 0.0 0.0 28 1.557170843715472 0.0 0.0 0.0 0.0 29 1.718886274942626 0.0 0.0 0.0 0.0 30 1.8920585486639883 0.0 0.0 0.0 0.0 31 2.061991715083323 0.0 0.0 0.0 0.0 32 2.2164491466151928 0.0 0.0 0.0 0.0 33 2.352791570643131 0.0 0.0 0.0 0.0 34 2.4826557800670135 0.0 0.0 0.0 0.0 35 2.605801841012617 0.0 0.0 0.0 0.0 36 2.7301475713293417 0.0 0.0 0.0 0.0 37 2.8626510533696914 0.0 0.0 0.0 0.0 38 3.0039121218192264 0.0 0.0 0.0 0.0 39 3.163528131646918 0.0 0.0 0.0 0.0 40 3.3440783720006766 0.0 0.0 0.0 0.0 41 3.5293673063703643 0.0 0.0 0.0 0.0 42 3.7223341247152284 0.0 0.0 0.0 0.0 43 3.9170404636482186 0.0 0.0 0.0 0.0 44 4.109467430776078 0.0 0.0 0.0 0.0 45 4.295656117174107 0.0 0.0 0.0 0.0 46 4.469248275175362 0.0 0.0 0.0 5.998346855606595E-5 47 4.632103392305081 0.0 0.0 0.0 5.998346855606595E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGTT 45 7.6397555E-11 53.000004 39 CGACGTA 75 0.0 53.000004 50 GTTTAGT 45 7.6397555E-11 53.000004 34 GACCGAC 75 0.0 53.000004 15 TCTAGTC 45 7.6397555E-11 53.000004 44 CGTAAGT 45 7.6397555E-11 53.000004 26 CTACAAC 45 7.6397555E-11 53.000004 47 TCGCGAT 90 0.0 53.000004 48 TAATCGA 45 7.6397555E-11 53.000004 42 TATTTCG 20 3.1386557E-4 53.0 51 ATTTACG 55 0.0 53.0 23 TTAGGCG 40 1.6025297E-9 53.0 16 CCTTATA 30 7.012404E-7 53.0 33 ACTATCC 25 1.4790223E-5 53.0 16 TACCCTA 20 3.1386557E-4 53.0 23 TCGCACT 15 0.006696793 53.0 52 CAAACGA 20 3.1386557E-4 53.0 44 GCCCACG 15 0.006696793 53.0 15 CTCAATT 40 1.6025297E-9 53.0 51 ATAGGTG 20 3.1386557E-4 53.0 28 >>END_MODULE