##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528004_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3662413 Sequences flagged as poor quality 0 Sequence length 52 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.14599718819259 31.0 31.0 33.0 30.0 33.0 2 31.775010082150757 31.0 31.0 34.0 30.0 34.0 3 32.25781308661803 33.0 31.0 34.0 30.0 34.0 4 35.92228402422119 37.0 35.0 37.0 35.0 37.0 5 36.01450327966835 37.0 35.0 37.0 35.0 37.0 6 36.00321591256912 37.0 35.0 37.0 35.0 37.0 7 35.848906991101224 37.0 35.0 37.0 35.0 37.0 8 32.68345623500135 35.0 32.0 35.0 28.0 35.0 9 36.83838551250228 37.0 37.0 39.0 34.0 39.0 10 37.88174654251173 39.0 37.0 39.0 35.0 39.0 11 37.87724186212751 39.0 37.0 39.0 35.0 39.0 12 38.01559818622313 39.0 38.0 39.0 35.0 39.0 13 38.05393493306189 39.0 39.0 39.0 37.0 39.0 14 38.70076449597574 40.0 39.0 40.0 36.0 40.0 15 38.12159797379487 40.0 38.0 40.0 34.0 40.0 16 37.68225292996721 40.0 37.0 40.0 33.0 40.0 17 37.72954825138508 40.0 37.0 40.0 33.0 40.0 18 37.75639475941135 40.0 37.0 40.0 33.0 40.0 19 37.86585811048617 40.0 37.0 40.0 33.0 40.0 20 37.88376078831087 40.0 37.0 40.0 34.0 40.0 21 37.88685901890366 40.0 37.0 40.0 34.0 40.0 22 37.79544360507676 40.0 37.0 40.0 33.0 40.0 23 37.69336063409561 40.0 37.0 40.0 33.0 40.0 24 37.69375436358488 40.0 37.0 40.0 33.0 40.0 25 37.616053405227646 40.0 37.0 40.0 33.0 40.0 26 37.59085471791412 40.0 37.0 40.0 33.0 40.0 27 37.51181802816886 40.0 37.0 40.0 33.0 40.0 28 37.3443937098301 40.0 36.0 40.0 33.0 40.0 29 37.437109086277275 40.0 36.0 40.0 33.0 40.0 30 37.441792064412176 40.0 36.0 40.0 33.0 40.0 31 37.41173428556528 40.0 36.0 40.0 33.0 40.0 32 37.31582620529143 40.0 36.0 40.0 33.0 40.0 33 37.201282870064084 40.0 35.0 40.0 33.0 40.0 34 37.11116987625372 39.0 35.0 40.0 33.0 40.0 35 36.90799808759962 39.0 35.0 40.0 32.0 40.0 36 36.4003300556218 39.0 35.0 40.0 31.0 40.0 37 36.43499463331962 39.0 35.0 40.0 31.0 40.0 38 36.31688070132997 38.0 35.0 40.0 31.0 40.0 39 36.175962951201846 38.0 35.0 40.0 31.0 40.0 40 35.976354387121276 38.0 35.0 40.0 31.0 40.0 41 35.81928635574415 37.0 35.0 40.0 30.0 40.0 42 35.44964726807162 37.0 35.0 40.0 30.0 40.0 43 35.192587509928565 37.0 34.0 40.0 29.0 40.0 44 34.971868819819065 36.0 34.0 40.0 28.0 40.0 45 34.55006876613861 36.0 34.0 40.0 27.0 40.0 46 34.51617854130596 35.0 34.0 39.0 27.0 40.0 47 34.40037756528278 35.0 34.0 39.0 27.0 40.0 48 34.206023187445 35.0 34.0 39.0 27.0 40.0 49 34.033206522584976 35.0 34.0 39.0 27.0 40.0 50 33.767126208868305 35.0 33.0 38.0 26.0 40.0 51 33.63467746537597 35.0 33.0 38.0 26.0 40.0 52 33.138579401067 35.0 33.0 37.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 7.0 14 9.0 15 26.0 16 86.0 17 141.0 18 376.0 19 878.0 20 1717.0 21 3134.0 22 5168.0 23 8429.0 24 12642.0 25 18348.0 26 25702.0 27 34897.0 28 46136.0 29 59615.0 30 74971.0 31 92449.0 32 113265.0 33 146967.0 34 218853.0 35 332871.0 36 436954.0 37 766859.0 38 1010480.0 39 251431.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.13604391421721 18.976095814426174 34.95921950910506 18.928640762251554 2 17.103505257326248 23.794176134695896 35.14240474790801 23.95991386006985 3 17.604732180668865 25.31180945458636 37.866974587519216 19.216483777225562 4 19.611988052685483 24.293628271852462 32.83125087203437 23.263132803427684 5 100.0 0.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 100.0 0.0 0.0 0.0 8 0.0 0.0 100.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 0.0 100.0 0.0 11 99.4405873941579 0.17046138706912628 0.3042529610942294 0.08469825767874896 12 99.18925036581074 0.4480652509697841 0.18782698728952743 0.1748573959299511 13 97.71658739743442 1.2922354742624602 0.4137709209747781 0.5774062073283379 14 58.458344266471315 24.4687860162139 7.103677275064281 9.969192442250506 15 32.33297282420087 25.10970226459987 19.886861476299913 22.67046343489934 16 27.875228708504473 18.629903290535502 28.04372417856752 25.451143822392503 17 24.056844490230894 18.235027016341412 30.20705201734485 27.501076476082847 18 24.535217628377794 19.6890410775628 29.441573083101225 26.334168210958186 19 26.02983333665537 18.113522423604326 29.011801782049158 26.844842457691144 20 30.307777959503746 17.304329140378215 24.97462738364024 27.413265516477797 21 31.302040485330302 19.63858254107333 20.143850516039564 28.915526457556805 22 31.403831299200828 19.768879151532065 21.401327485458356 27.42596206380875 23 29.380520438301193 20.043042660672075 22.552399196922902 28.024037704103826 24 30.275449546514828 20.672245320230132 22.27231063236178 26.779994500893263 25 33.14394089361304 18.952149853115966 22.5453819653873 25.358527287883696 26 31.971872096347408 18.968887452070536 21.65681478304058 27.40242566854148 27 32.41496794599626 21.05456156910758 20.81368212705667 25.716788357839487 28 31.85372594516238 20.690593878953575 19.961921279768283 27.493758896115754 29 30.57795502582587 21.04604259541455 20.31275555214554 28.063246826614037 30 31.354683374048747 20.935678199045274 19.35382492362276 28.355813503283215 31 29.60053931656533 20.629022450499164 20.650292580328873 29.120145652606627 32 31.462918026994767 22.890618835177793 18.504084602146182 27.142378535681257 33 30.33396288184866 23.33499799176117 20.263307278561975 26.067731847828195 34 30.06607938536697 23.686105308167047 19.834054761164293 26.41376054530169 35 31.484870766896034 23.450604833480003 19.7182021798197 25.346322219804268 36 33.18880202751574 22.27029010654997 19.359968414266767 25.180939451667523 37 32.31656287808065 23.22100210981121 19.83380902153853 24.628625990569606 38 30.942769152468603 25.067216613746186 21.41727325672992 22.572740977055293 39 31.961086857216813 24.334366440922967 21.46969771022547 22.234848991634752 40 32.445275833173376 24.180233086765472 19.02488878234104 24.34960229772011 41 31.94994666084901 25.662152247712093 17.981396418153825 24.406504673285074 42 32.391076593491775 25.276149904448243 18.39464855547422 23.938124946585763 43 31.738201016652134 23.96218012550742 19.220634046460624 25.07898481137982 44 29.954568204077475 24.296686364973038 20.21058247663494 25.538162954314547 45 28.237093959638088 24.349438471302935 20.668668443455175 26.7447991256038 46 28.910393229818705 22.534077942602323 21.76057151391719 26.794957313661786 47 28.2355649130778 21.73698050984419 22.827518360163097 27.199936216914917 48 29.463116256959548 21.23823828716204 22.349145222016194 26.94950023386221 49 29.446296744796395 21.671013072528957 21.35941522706478 27.523274955609867 50 28.923690474012627 23.126638093519215 20.741216241860215 27.20845519060794 51 28.602863740381 23.965292827433714 21.36943594291523 26.06240748927005 52 30.17993874530262 23.10968205934175 21.203070216275442 25.507308979080186 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.5 6 1.0 7 4.0 8 7.0 9 25.0 10 43.0 11 276.5 12 510.0 13 1019.5 14 2281.5 15 3034.0 16 3049.0 17 3064.0 18 3402.0 19 3740.0 20 4447.5 21 5155.0 22 6788.0 23 8421.0 24 12238.0 25 16055.0 26 20561.5 27 25068.0 28 28783.0 29 32498.0 30 32704.0 31 32910.0 32 31942.5 33 30975.0 34 31957.0 35 32939.0 36 32982.0 37 33025.0 38 35227.0 39 39515.5 40 41602.0 41 47789.5 42 53977.0 43 57147.0 44 60317.0 45 75923.0 46 91529.0 47 96310.5 48 101092.0 49 120131.5 50 139171.0 51 162096.5 52 185022.0 53 210542.5 54 236063.0 55 255315.0 56 274567.0 57 302136.0 58 329705.0 59 339957.0 60 350209.0 61 355606.5 62 361004.0 63 337926.0 64 287838.0 65 260828.0 66 222283.5 67 183739.0 68 164144.5 69 144550.0 70 127670.5 71 110791.0 72 91815.5 73 72840.0 74 57714.0 75 42588.0 76 33784.5 77 24981.0 78 17581.0 79 10181.0 80 7185.5 81 4190.0 82 3118.5 83 2047.0 84 1093.0 85 139.0 86 78.5 87 18.0 88 14.5 89 6.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 3662413.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.677739024887902 #Duplication Level Percentage of deduplicated Percentage of total 1 76.717574609707 8.191702403048177 2 8.141388081264857 1.73863234464158 3 3.631905939729499 1.163416313621155 4 2.1171424933150043 0.9042518008847237 5 1.3141027015561564 0.7015822849558395 6 0.9175925646906327 0.5878688362166486 7 0.6339324174035369 0.473827543871589 8 0.46272166684327604 0.39526569597709016 9 0.35870955680763794 0.34471863299926436 >10 2.65859623995509 5.642268756493352 >50 0.5277386478117649 4.154392545188 >100 2.2864029855030252 58.54611713974385 >500 0.21469817041567005 14.701858202904747 >1k 0.017493924996832375 2.4540974994539884 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0013925245459755632 0.0 0.0 0.0 0.0 12 0.0044233132636870825 0.0 0.0 0.0 0.0 13 0.01037567308766106 0.0 0.0 0.0 0.0 14 0.06236325613741541 0.0 0.0 0.0 0.0 15 0.12008476378824562 0.0 0.0 0.0 0.0 16 0.1520855239428213 0.0 0.0 0.0 0.0 17 0.17234539086662262 0.0 0.0 0.0 0.0 18 0.19347899868201648 0.0 0.0 0.0 0.0 19 0.21707000275501426 0.0 0.0 0.0 0.0 20 0.24431979681155566 0.0 0.0 0.0 0.0 21 0.2701770663221215 0.0 0.0 0.0 0.0 22 0.2988193849246385 0.0 0.0 0.0 0.0 23 0.3257961349525572 0.0 0.0 0.0 0.0 24 0.35487532400087046 0.0 0.0 0.0 0.0 25 0.3867395621411348 0.0 0.0 0.0 0.0 26 0.42791460165743184 0.0 0.0 0.0 0.0 27 0.4711101669855366 0.0 0.0 0.0 0.0 28 0.5163808669311735 0.0 0.0 0.0 0.0 29 0.570225149375562 0.0 0.0 0.0 0.0 30 0.6331617979730849 0.0 0.0 0.0 0.0 31 0.686760340791713 0.0 0.0 0.0 0.0 32 0.7289183388110516 0.0 0.0 0.0 0.0 33 0.7681274613212655 0.0 0.0 0.0 0.0 34 0.8059986680912283 0.0 0.0 0.0 0.0 35 0.8402929980862344 0.0 0.0 0.0 0.0 36 0.8749149809155876 0.0 0.0 0.0 0.0 37 0.9122947084340297 0.0 0.0 0.0 0.0 38 0.9496198271467472 0.0 0.0 0.0 0.0 39 0.9926788704605406 0.0 0.0 0.0 0.0 40 1.0366389590687888 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACTA 70 0.0 46.000004 15 CGTATGT 35 1.0203985E-7 46.000004 31 CAATTTA 35 1.0203985E-7 46.000004 45 ATACGTT 35 1.0203985E-7 46.000004 33 TCGAATA 35 1.0203985E-7 46.000004 15 GCGTAAT 35 1.0203985E-7 46.000004 15 ACGCGTA 35 1.0203985E-7 46.000004 28 TTAGGTA 25 3.4186298E-5 46.0 27 TAATACT 40 5.6170393E-9 46.0 34 TAATACA 20 6.3132716E-4 46.0 32 CGAGTTA 65 0.0 46.0 25 CGTATAG 25 3.4186298E-5 46.0 45 TTTACTA 20 6.3132716E-4 46.0 26 AGATATA 45 3.110472E-10 46.0 30 CGACGAA 45 3.110472E-10 46.0 16 ACGTTAT 20 6.3132716E-4 46.0 45 ATAATAC 20 6.3132716E-4 46.0 31 CATGACG 25 3.4186298E-5 46.0 24 ACTCTAT 30 1.8625269E-6 46.0 24 ACCGAAT 40 5.6170393E-9 46.0 27 >>END_MODULE