Basic Statistics
Measure | Value |
---|---|
Filename | SRR1528003_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3609885 |
Sequences flagged as poor quality | 0 |
Sequence length | 59 |
%GC | 57 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCGTTAT | 45 | 7.6397555E-11 | 53.0 | 36 |
ACGTTAT | 20 | 3.139147E-4 | 53.0 | 45 |
ACGTTAC | 30 | 7.014696E-7 | 53.0 | 35 |
CCAATAG | 30 | 7.014696E-7 | 53.0 | 49 |
TAAACGT | 15 | 0.0066974224 | 53.0 | 25 |
TAAGTAC | 40 | 1.6025297E-9 | 53.0 | 34 |
TAACGCG | 20 | 3.139147E-4 | 53.0 | 24 |
TCGATAA | 15 | 0.0066974224 | 53.0 | 35 |
GTTAATC | 15 | 0.0066974224 | 53.0 | 36 |
CACTAAT | 15 | 0.0066974224 | 53.0 | 45 |
CGCTAAG | 20 | 3.139147E-4 | 53.0 | 33 |
ACGGATA | 45 | 7.6397555E-11 | 53.0 | 43 |
CGTACTA | 15 | 0.0066974224 | 53.0 | 39 |
CATACGT | 30 | 7.014696E-7 | 53.0 | 48 |
GCGATAA | 20 | 3.139147E-4 | 53.0 | 30 |
CGTACCA | 45 | 7.6397555E-11 | 53.0 | 26 |
TTAACCG | 20 | 3.139147E-4 | 53.0 | 31 |
CGTACAT | 30 | 7.014696E-7 | 53.0 | 52 |
CATAACG | 15 | 0.0066974224 | 53.0 | 35 |
TTACGAT | 40 | 1.6025297E-9 | 53.0 | 40 |