##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528003_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3609885 Sequences flagged as poor quality 0 Sequence length 59 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.883423987190728 31.0 31.0 33.0 30.0 33.0 2 31.44120823793556 31.0 31.0 33.0 30.0 34.0 3 31.979557243513298 31.0 31.0 34.0 30.0 34.0 4 35.760000387823986 37.0 35.0 37.0 35.0 37.0 5 35.77922953224272 37.0 35.0 37.0 35.0 37.0 6 35.77828296469278 37.0 35.0 37.0 35.0 37.0 7 35.642701083275504 37.0 35.0 37.0 33.0 37.0 8 31.758903399969807 33.0 31.0 35.0 27.0 35.0 9 36.274172999970915 37.0 35.0 39.0 32.0 39.0 10 37.548504453742986 39.0 37.0 39.0 35.0 39.0 11 37.37979270807796 39.0 37.0 39.0 35.0 39.0 12 37.699129196636456 39.0 37.0 39.0 35.0 39.0 13 37.76381685289144 39.0 37.0 39.0 35.0 39.0 14 38.112214378020354 40.0 38.0 40.0 34.0 40.0 15 37.444725247480186 40.0 37.0 40.0 32.0 40.0 16 37.018377870763196 39.0 36.0 40.0 32.0 40.0 17 36.986354689969346 39.0 36.0 40.0 32.0 40.0 18 36.95777621724792 39.0 36.0 40.0 31.0 40.0 19 37.125061601685374 39.0 36.0 40.0 32.0 40.0 20 37.26778415378883 39.0 36.0 40.0 32.0 40.0 21 37.238472970745605 40.0 36.0 40.0 32.0 40.0 22 37.162005991880626 39.0 36.0 40.0 32.0 40.0 23 37.076677511887496 39.0 36.0 40.0 31.0 40.0 24 37.05176868515202 39.0 36.0 40.0 31.0 40.0 25 36.93093768915076 39.0 35.0 40.0 31.0 40.0 26 36.75032971964481 39.0 35.0 40.0 31.0 40.0 27 36.58563361436722 39.0 35.0 40.0 30.0 40.0 28 36.567071527209315 39.0 35.0 40.0 30.0 40.0 29 36.52581176408667 39.0 35.0 40.0 30.0 40.0 30 36.46293912409952 39.0 35.0 40.0 30.0 40.0 31 36.431889935551965 39.0 35.0 40.0 30.0 40.0 32 36.2627103079461 39.0 35.0 40.0 30.0 40.0 33 36.08113000829666 38.0 35.0 40.0 30.0 40.0 34 35.97141432483306 38.0 35.0 40.0 30.0 40.0 35 35.78213821215911 38.0 35.0 40.0 29.0 40.0 36 35.55385587075489 38.0 34.0 40.0 28.0 40.0 37 35.35921393617802 38.0 34.0 40.0 28.0 40.0 38 35.107877951790705 37.0 34.0 40.0 27.0 40.0 39 34.89828290928936 37.0 33.0 40.0 27.0 40.0 40 34.645876253675674 37.0 33.0 40.0 26.0 40.0 41 34.48203114503647 36.0 33.0 40.0 26.0 40.0 42 34.28126380757282 36.0 33.0 39.0 25.0 40.0 43 33.980295494177795 35.0 33.0 39.0 24.0 40.0 44 33.72820048284087 35.0 33.0 39.0 23.0 40.0 45 33.505972904954035 35.0 33.0 39.0 23.0 40.0 46 33.27852826336573 35.0 32.0 39.0 23.0 40.0 47 33.1304299167425 35.0 32.0 38.0 23.0 40.0 48 32.903116304259 35.0 32.0 38.0 23.0 40.0 49 32.76354953135626 35.0 32.0 38.0 22.0 40.0 50 32.50488395059676 35.0 31.0 37.0 22.0 40.0 51 32.26018058747024 35.0 31.0 37.0 20.0 40.0 52 32.029601774017735 35.0 31.0 37.0 20.0 39.0 53 31.74601517776882 35.0 31.0 36.0 20.0 39.0 54 31.530646544141987 34.0 30.0 36.0 20.0 39.0 55 31.33321587806814 34.0 30.0 35.0 19.0 39.0 56 31.094347880888172 34.0 30.0 35.0 18.0 38.0 57 30.88820391785334 34.0 30.0 35.0 18.0 38.0 58 30.662259601067625 34.0 30.0 35.0 17.0 38.0 59 30.122936880260728 34.0 29.0 35.0 15.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 2.0 13 10.0 14 35.0 15 81.0 16 349.0 17 900.0 18 2108.0 19 4239.0 20 7526.0 21 11711.0 22 17069.0 23 24026.0 24 32622.0 25 42369.0 26 53897.0 27 67516.0 28 80282.0 29 94117.0 30 111615.0 31 135511.0 32 165826.0 33 212104.0 34 293699.0 35 383711.0 36 534742.0 37 688108.0 38 584181.0 39 61525.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.13150141902027 19.304243763998024 34.453867643983116 19.110387172998585 2 16.110319303800537 24.398117945585522 35.2328952307345 24.25866751987944 3 17.41579025370614 25.609015245638016 37.805497959076256 19.16969654157958 4 19.68788479411394 24.505739102492186 32.85398288311123 22.95239322028264 5 100.0 0.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 100.0 0.0 0.0 0.0 8 0.0 0.0 100.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 0.0 100.0 0.0 11 99.43122841863384 0.17488091725913707 0.307738335154721 0.08615232895230734 12 99.17459974486722 0.4618983707237211 0.18341304501389932 0.1800888393951608 13 97.71638154678057 1.3006508517584356 0.398184429697899 0.5847831717630895 14 58.31387980503534 24.67103522688396 7.060280313638801 9.9548046544419 15 32.38862179820133 25.14373726586858 19.80096318857803 22.66667774735206 16 27.82418276482492 18.668572544554742 28.013690186806507 25.493554503813833 17 24.004698210607817 18.258504079769857 30.065472999832405 27.671324709789925 18 24.550228054356303 19.729714381483067 29.385562143946416 26.334495420214214 19 26.02672938334601 18.176146885565604 28.99363830149714 26.803485429591245 20 30.210103645961023 17.36304619122216 25.031074397106835 27.39577576570999 21 31.33036093947591 19.640487162333425 20.17596128408523 28.853190614105433 22 31.30515238020048 19.80373335992698 21.4546446770465 27.436469582826046 23 29.298135536173593 20.16504680897037 22.60462590913561 27.93219174572043 24 30.243013281586535 20.78343215919621 22.2441435114969 26.729411047720358 25 33.12061187544755 19.055676288856844 22.500051940712794 25.323659894982804 26 31.897581224886668 19.097810595074357 21.706397849238964 27.29821033080001 27 32.409508890172404 21.08391264541668 20.926262193948006 25.58031627046291 28 31.73893351173237 20.723928878620786 20.03307584590645 27.504061763740395 29 30.504129632938447 21.10740369845577 20.35701968345252 28.03144698515327 30 31.279251278087806 20.952468014909062 19.37912149556011 28.389159211443022 31 29.495621051640146 20.73135293783597 20.66545056144448 29.107575449079405 32 31.44828713380066 22.986604836442158 18.470532994818395 27.094575034938785 33 30.31739238230581 23.473019223604076 20.276684714333005 25.932903679757114 34 30.11591782009676 23.70540889806739 19.85406737333738 26.324605908498473 35 31.41590383073145 23.562966687304442 19.69184613914294 25.329283342821167 36 33.096151262436344 22.477419640791883 19.30809430217306 25.118334794598717 37 32.22905992850188 23.382822444482304 19.841379988559193 24.546737638456626 38 30.87710550336091 25.188807953715976 21.392759049110982 22.54132749381213 39 31.821761635065936 24.45557129936272 21.517693776948573 22.204973288622767 40 32.38488206688025 24.33925180442036 19.038335016212425 24.237531112486963 41 31.83985085397457 25.915811722534098 17.867716007573648 24.376621415917683 42 32.252440174687 25.551340278152907 18.306815868095523 23.889403679064568 43 31.798658406015708 24.13553340341867 19.087228540521373 24.978579650044253 44 29.696430772725446 24.477538758159888 20.23358084814336 25.5924496209713 45 28.04153040886344 24.536044777049685 20.595171314321647 26.82725349976523 46 28.709252510814053 22.741029146357846 21.772881961613734 26.77683638121436 47 28.1214775539941 21.94200092246706 22.670389776959652 27.266131746579187 48 29.32148808064523 21.42051616602745 22.265335322316364 26.99266043101096 49 29.380381923523878 21.85008663710894 21.265358868772825 27.504172570594353 50 28.66897421940034 23.373265353328428 20.656475206273882 27.301285220997347 51 28.48087958480672 24.10744386594033 21.369600416633773 26.042076132619187 52 29.972201330513297 23.236501993830828 21.260206350063786 25.53109032559209 53 28.457887162610447 23.350965473969392 21.603375176771557 26.587772186648607 54 26.981441237047715 23.25007583344068 22.50514905599486 27.26333387351675 55 28.06596332016117 24.001374004989078 20.859390257584383 27.073272417265372 56 29.000923852144872 23.601832191330193 20.94598581395252 26.45125814257241 57 29.298024729319632 22.92646441645648 20.03928102972809 27.736229824495794 58 29.078294737921013 22.313342391793643 20.32092435077572 28.28743851950962 59 28.025214099618132 22.875327053354884 21.462262648256107 27.637196198770873 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 2.0 7 4.0 8 10.0 9 206.5 10 397.0 11 698.0 12 999.0 13 1531.0 14 1989.5 15 1916.0 16 1969.0 17 2022.0 18 2159.5 19 2490.0 20 2683.0 21 3641.0 22 4599.0 23 6155.0 24 7711.0 25 10846.5 26 17287.0 27 20592.0 28 23085.0 29 25578.0 30 27388.5 31 31237.5 32 33276.0 33 33640.0 34 34004.0 35 35535.5 36 37594.5 37 38122.0 38 39288.5 39 40455.0 40 41178.5 41 41902.0 42 45137.5 43 55648.0 44 62923.0 45 66786.5 46 70650.0 47 79439.5 48 93615.0 49 99001.0 50 116796.0 51 134591.0 52 155267.5 53 186830.5 54 197717.0 55 220836.5 56 243956.0 57 264063.0 58 297659.0 59 311148.0 60 317459.0 61 323770.0 62 308258.0 63 292746.0 64 263560.5 65 213436.5 66 192498.0 67 171789.5 68 151081.0 69 135739.0 70 103514.5 71 86632.0 72 74771.5 73 62911.0 74 53279.5 75 34486.0 76 25324.0 77 18686.0 78 12048.0 79 9203.0 80 6358.0 81 3946.5 82 990.5 83 446.0 84 360.5 85 275.0 86 225.5 87 113.5 88 51.0 89 38.0 90 25.0 91 13.5 92 1.5 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 3609885.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.776768401744004 #Duplication Level Percentage of deduplicated Percentage of total 1 82.61783874868286 12.208246690419182 2 6.719660727150728 1.9858974060680201 3 2.788549541763926 1.236172522663047 4 1.6061236082193244 0.9493326633292152 5 0.9532313147866881 0.7042839185946411 6 0.623041543536214 0.5523924356099843 7 0.4236001100370451 0.43816085046794834 8 0.29577706918022656 0.3496503399858258 9 0.2293600985411614 0.3050280951069532 >10 1.6130317756197876 4.827727553214764 >50 0.36731441960193295 4.027655181055391 >100 1.6056716358720187 56.28375717837499 >500 0.14481110283155527 13.811276149503943 >1k 0.011988304176593932 2.320419015606146 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 8.033496911951488E-4 0.0 0.0 0.0 0.0 12 0.003656626180612402 0.0 0.0 0.0 0.0 13 0.008587531181741246 0.0 0.0 0.0 0.0 14 0.05689931950740813 0.0 0.0 0.0 0.0 15 0.11357702530690036 0.0 0.0 0.0 0.0 16 0.14288543817877855 0.0 0.0 0.0 0.0 17 0.15972807998038718 0.0 0.0 0.0 0.0 18 0.17997803254120284 0.0 0.0 0.0 0.0 19 0.2006435108043608 0.0 0.0 0.0 0.0 20 0.22455008954578887 0.0 0.0 0.0 0.0 21 0.24884449227606972 0.0 0.0 0.0 0.0 22 0.2740807532649932 0.0 0.0 0.0 0.0 23 0.2982643491413161 0.0 0.0 0.0 0.0 24 0.32560594035544066 0.0 0.0 0.0 0.0 25 0.35466503780591346 0.0 0.0 0.0 0.0 26 0.3930596127023437 0.0 0.0 0.0 0.0 27 0.4314264858852844 0.0 0.0 0.0 0.0 28 0.470181183057078 0.0 0.0 0.0 0.0 29 0.5177450251185287 0.0 0.0 0.0 0.0 30 0.575503097744111 0.0 0.0 0.0 2.7701713489487894E-5 31 0.6240642014911832 0.0 0.0 0.0 2.7701713489487894E-5 32 0.6620709523987606 0.0 0.0 0.0 2.7701713489487894E-5 33 0.6957008325749989 0.0 0.0 0.0 2.7701713489487894E-5 34 0.7280564339307208 0.0 0.0 0.0 2.7701713489487894E-5 35 0.759747194162695 0.0 0.0 0.0 2.7701713489487894E-5 36 0.7907731132709214 0.0 0.0 0.0 2.7701713489487894E-5 37 0.823461135188517 0.0 0.0 0.0 2.7701713489487894E-5 38 0.8589193284550616 0.0 0.0 0.0 2.7701713489487894E-5 39 0.8972862016380023 0.0 0.0 0.0 2.7701713489487894E-5 40 0.9365672313660961 0.0 0.0 0.0 2.7701713489487894E-5 41 0.9754050336783582 0.0 0.0 0.0 2.7701713489487894E-5 42 1.01695760391259 0.0 0.0 0.0 2.7701713489487894E-5 43 1.0554352839494887 0.0 0.0 0.0 2.7701713489487894E-5 44 1.0896746018224956 0.0 0.0 0.0 2.7701713489487894E-5 45 1.1270442133198149 0.0 0.0 0.0 2.7701713489487894E-5 46 1.1608126020635006 0.0 0.0 0.0 2.7701713489487894E-5 47 1.1928357828573486 0.0 0.0 0.0 2.7701713489487894E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAT 45 7.6397555E-11 53.0 36 ACGTTAT 20 3.139147E-4 53.0 45 ACGTTAC 30 7.014696E-7 53.0 35 CCAATAG 30 7.014696E-7 53.0 49 TAAACGT 15 0.0066974224 53.0 25 TAAGTAC 40 1.6025297E-9 53.0 34 TAACGCG 20 3.139147E-4 53.0 24 TCGATAA 15 0.0066974224 53.0 35 GTTAATC 15 0.0066974224 53.0 36 CACTAAT 15 0.0066974224 53.0 45 CGCTAAG 20 3.139147E-4 53.0 33 ACGGATA 45 7.6397555E-11 53.0 43 CGTACTA 15 0.0066974224 53.0 39 CATACGT 30 7.014696E-7 53.0 48 GCGATAA 20 3.139147E-4 53.0 30 CGTACCA 45 7.6397555E-11 53.0 26 TTAACCG 20 3.139147E-4 53.0 31 CGTACAT 30 7.014696E-7 53.0 52 CATAACG 15 0.0066974224 53.0 35 TTACGAT 40 1.6025297E-9 53.0 40 >>END_MODULE