##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527997_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8267254 Sequences flagged as poor quality 0 Sequence length 59 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.489526510253587 31.0 31.0 34.0 30.0 34.0 2 31.985436276664537 33.0 31.0 34.0 30.0 34.0 3 32.241167744452994 34.0 31.0 34.0 30.0 34.0 4 35.947727746117394 37.0 35.0 37.0 35.0 37.0 5 35.608860088246956 37.0 35.0 37.0 33.0 37.0 6 35.89296494337781 37.0 35.0 37.0 35.0 37.0 7 35.887384976922206 37.0 35.0 37.0 35.0 37.0 8 35.83768576603549 37.0 35.0 37.0 35.0 37.0 9 37.91176296264757 39.0 38.0 39.0 35.0 39.0 10 37.49672188613051 39.0 37.0 39.0 34.0 39.0 11 37.86631147416058 39.0 37.0 39.0 35.0 39.0 12 37.82730166509944 39.0 37.0 39.0 35.0 39.0 13 37.73797490678283 39.0 37.0 39.0 35.0 39.0 14 38.07845495009588 40.0 38.0 40.0 34.0 40.0 15 37.618428440689016 40.0 37.0 40.0 32.0 40.0 16 37.201788768072205 39.0 36.0 40.0 32.0 40.0 17 37.153027353459805 39.0 36.0 40.0 32.0 40.0 18 37.158115137142275 40.0 36.0 40.0 32.0 40.0 19 37.223449043660686 40.0 36.0 40.0 32.0 40.0 20 37.3011440074298 40.0 36.0 40.0 32.0 40.0 21 37.26882807761803 40.0 36.0 40.0 32.0 40.0 22 37.23607367089483 40.0 36.0 40.0 32.0 40.0 23 37.171264848037815 40.0 36.0 40.0 32.0 40.0 24 37.1362590286932 39.0 36.0 40.0 32.0 40.0 25 37.074056996434365 39.0 36.0 40.0 31.0 40.0 26 36.92261832042417 39.0 36.0 40.0 31.0 40.0 27 36.7997880553809 39.0 35.0 40.0 31.0 40.0 28 36.76252550121237 39.0 35.0 40.0 31.0 40.0 29 36.73497705525922 39.0 35.0 40.0 31.0 40.0 30 36.696750335722115 39.0 35.0 40.0 31.0 40.0 31 36.67658112355082 39.0 35.0 40.0 31.0 40.0 32 36.560593638468106 39.0 35.0 40.0 31.0 40.0 33 36.42917914461077 39.0 35.0 40.0 30.0 40.0 34 36.34715202895665 39.0 35.0 40.0 30.0 40.0 35 36.19991462703335 38.0 35.0 40.0 30.0 40.0 36 36.00634817800445 38.0 35.0 40.0 30.0 40.0 37 35.85009194104838 38.0 35.0 40.0 29.0 40.0 38 35.657291042467065 38.0 35.0 40.0 29.0 40.0 39 35.511047440903596 38.0 34.0 40.0 28.0 40.0 40 35.33210096121397 38.0 34.0 40.0 28.0 40.0 41 35.20486149330842 37.0 34.0 40.0 28.0 40.0 42 35.09465754892737 37.0 34.0 40.0 27.0 40.0 43 34.874831715585366 37.0 34.0 40.0 27.0 40.0 44 34.74072588068541 37.0 33.0 40.0 27.0 40.0 45 34.53741738187795 36.0 33.0 40.0 26.0 40.0 46 34.3242064414617 36.0 33.0 39.0 26.0 40.0 47 34.19473672878564 36.0 33.0 39.0 26.0 40.0 48 33.98720941681482 35.0 33.0 39.0 25.0 40.0 49 33.87670996923525 35.0 33.0 39.0 25.0 40.0 50 33.6564428769214 35.0 33.0 39.0 24.0 40.0 51 33.463349982956856 35.0 33.0 38.0 24.0 40.0 52 33.310855817421356 35.0 32.0 38.0 24.0 40.0 53 33.11586059893648 35.0 32.0 38.0 23.0 40.0 54 32.943552720165606 35.0 32.0 38.0 23.0 40.0 55 32.75837769106889 35.0 32.0 37.0 23.0 40.0 56 32.55341459207616 35.0 31.0 37.0 23.0 40.0 57 32.39498254196617 35.0 31.0 37.0 22.0 39.0 58 32.2081763787589 35.0 31.0 36.0 22.0 39.0 59 31.7001277570521 34.0 30.0 36.0 21.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 5.0 13 9.0 14 35.0 15 190.0 16 664.0 17 1700.0 18 3789.0 19 7568.0 20 12904.0 21 19863.0 22 29251.0 23 40980.0 24 55557.0 25 73527.0 26 95798.0 27 120946.0 28 148885.0 29 177719.0 30 216703.0 31 260449.0 32 322123.0 33 406140.0 34 569853.0 35 819579.0 36 1046053.0 37 1532893.0 38 1899662.0 39 404408.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.349527666623043 18.26918587477777 33.97089287446594 18.410393584133256 2 19.456956324312767 23.516708208070057 35.17773858163787 21.848596885979312 3 19.54866755031356 22.376982732113955 37.24864386651239 20.825705851060096 4 19.930837978366213 20.13778698465053 38.698895667170746 21.232479369812516 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 0.0 0.0 0.0 100.0 8 0.0 0.0 100.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 0.0 0.0 100.0 11 99.51104683610785 0.3514347085501425 0.08969120822947983 0.0478272471125237 12 99.19429111528447 0.6008040880321326 0.0921950625927303 0.11270973409066662 13 95.31798587535837 2.54019049130461 0.8595478014828141 1.2822758318542045 14 52.253069761737095 30.17967029923116 7.051628025460449 10.515631913571303 15 33.10022892728347 26.248026249102786 20.006062472496914 20.64568235111683 16 28.77269768172116 18.389201541406614 26.583204048164 26.25489672870823 17 22.64829410104008 18.733040015463416 30.01698024519387 28.601685638302634 18 23.60671391008429 20.74838876366929 30.341864420761716 25.303032905484702 19 25.93737896525255 20.142734213803035 28.847039174071583 25.07284764687283 20 28.41107821291084 20.38849901067513 25.671063209138122 25.529359567275904 21 29.6270684316703 20.867920593706206 22.79013079796508 26.71488017665842 22 28.899208854596704 20.75463025570522 24.100505439895763 26.245655449802317 23 28.075646399638863 21.911398875612146 22.996402433020684 27.016552291728306 24 27.668751921738465 23.368134086602396 23.092952024940807 25.87016196671833 25 29.075990649374024 20.31547597303772 24.78342869349363 25.825104684094626 26 29.50245631741809 20.361295298293726 22.932862592585156 27.203385791703028 27 29.374941183614293 22.415689659468548 22.209926052834472 25.999443104082687 28 28.72699931561314 22.39175184408269 22.411818966733087 26.46942987357108 29 29.94067921464612 21.61650047282931 20.896406473056228 27.546413839468343 30 28.93764967182574 21.222379280955924 21.541179211380225 28.298791835838117 31 27.14681319819132 21.687951041542934 22.09251100788726 29.07272475237848 32 27.998849436584383 23.418828065522117 22.03592631846076 26.546396179432737 33 29.28012130751033 22.209454312157337 21.914809923585267 26.595614456747064 34 28.14996370015969 22.50350600090429 22.67113118817929 26.675399110756725 35 30.143684952706185 22.912009235472865 21.636990952497648 25.3073148593233 36 31.504499559345824 21.98127697540199 22.012557011070424 24.501666454181763 37 30.386824936067043 22.528665503684778 22.15428484476224 24.93022471548594 38 28.666422974303195 24.45570197794818 23.342635898207558 23.535239149541066 39 28.530476987884974 24.62440370164023 24.780525673942037 22.06459363653276 40 29.871151896385427 24.514488123867974 22.20105974728731 23.413300232459292 41 29.84520615914305 25.2714988556055 21.371884787863056 23.511410197388397 42 30.264353798734138 24.744854821201816 20.520187235084347 24.4706041449797 43 29.63379376029816 23.383677337118225 21.35730921053109 25.625219692052525 44 28.35363471353366 24.26966680835015 22.63073083275293 24.74596764536326 45 27.107586146500395 23.615350393250285 22.290339694413646 26.98672376583567 46 27.824910181784666 23.179462007578334 21.15350514209434 27.84212266854266 47 28.83885023975313 22.39648134676883 22.556909464738837 26.207758948739208 48 28.52448951005981 22.191552358255837 22.616409269631728 26.667548862052627 49 28.445817680211594 22.521335379317 23.170740853008752 25.862106087462656 50 27.849114107296085 23.140065613080232 22.331852874001452 26.678967405622227 51 26.956822664454243 23.785564106292124 23.011836820303333 26.2457764089503 52 27.343093607623526 23.44774939780488 23.037806749375306 26.17135024519629 53 26.65945669505255 23.927703201087084 23.37389174204639 26.038948361813972 54 26.689950496259097 23.060946234384478 23.683462489479577 26.565640779876848 55 26.748035079120587 23.86412707290716 22.58889106346557 26.798946784506683 56 26.823791793502412 23.74620399953842 23.636784354272894 25.79321985268627 57 27.47966858161126 23.065978134940572 23.14651273566773 26.307840547780437 58 27.136967123545496 22.659712644609687 23.542351547442475 26.66096868440234 59 26.51390655228447 23.488282808294024 22.886946500010765 27.11086413941074 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.5 4 0.5 5 0.0 6 36.0 7 72.0 8 245.5 9 917.5 10 1416.0 11 1960.5 12 2505.0 13 2564.5 14 3115.5 15 3607.0 16 3614.0 17 3621.0 18 4237.5 19 5734.0 20 6614.0 21 9226.0 22 11838.0 23 15249.0 24 18660.0 25 24787.0 26 36059.5 27 41205.0 28 46530.0 29 51855.0 30 61324.0 31 74656.0 32 78519.0 33 88039.5 34 97560.0 35 108211.0 36 128647.0 37 138432.0 38 146099.5 39 153767.0 40 161905.5 41 170044.0 42 202929.0 43 253637.5 44 271461.0 45 291748.5 46 312036.0 47 334325.0 48 385194.5 49 413775.0 50 435590.5 51 457406.0 52 478471.0 53 543093.0 54 586650.0 55 616394.5 56 646139.0 57 655602.5 58 635230.5 59 605395.0 60 564655.5 61 523916.0 62 476402.5 63 428889.0 64 381325.5 65 306817.5 66 279873.0 67 251032.5 68 222192.0 69 194189.0 70 137020.5 71 107855.0 72 89328.5 73 70802.0 74 52864.5 75 29357.5 76 23788.0 77 16667.5 78 9547.0 79 6603.5 80 3660.0 81 2669.0 82 1491.0 83 1304.0 84 820.0 85 336.0 86 286.0 87 149.5 88 63.0 89 56.0 90 49.0 91 83.0 92 58.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 8267254.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.944683846000004 #Duplication Level Percentage of deduplicated Percentage of total 1 78.68618195303148 8.611953845247607 2 7.432642929167256 1.6269585399988604 3 3.279049929945728 1.0766449439551335 4 1.9423973367078924 0.8503569901432119 5 1.1655488630992088 0.637828190684279 6 0.804911770131108 0.5285702908805524 7 0.5339325808622697 0.4090606304831461 8 0.3829398011407063 0.3352924044428114 9 0.2784414060452744 0.27427078429211177 >10 1.9616836782078175 4.588721346685432 >50 0.8001105218559278 6.56733954283788 >100 2.5507332015362807 60.87156317316176 >500 0.16746151709252657 11.697515288019964 >1k 0.01396451117650643 1.9239240291672743 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 2.2982238116791862E-4 0.0 0.0 0.0 0.0 12 0.0016087566681754304 0.0 0.0 0.0 0.0 13 0.003556198950703583 0.0 0.0 0.0 0.0 14 0.0193413677625001 0.0 0.0 0.0 0.0 15 0.032465435318668086 0.0 0.0 0.0 0.0 16 0.04124706946224224 0.0 0.0 0.0 0.0 17 0.051649556188790136 0.0 0.0 0.0 0.0 18 0.06363660775391684 0.0 0.0 0.0 0.0 19 0.07690582628766456 0.0 0.0 0.0 0.0 20 0.09057421000975656 0.0 0.0 0.0 0.0 21 0.10425468964664687 0.0 0.0 0.0 0.0 22 0.1172094143956385 0.0 0.0 0.0 0.0 23 0.13069635939575583 0.0 0.0 0.0 0.0 24 0.14535660813130938 0.0 0.0 0.0 0.0 25 0.1599926650372663 0.0 0.0 0.0 0.0 26 0.17799138625715383 0.0 0.0 0.0 0.0 27 0.19511920161156293 0.0 0.0 0.0 0.0 28 0.21377110223055926 0.0 0.0 0.0 0.0 29 0.23455188385405842 0.0 0.0 0.0 0.0 30 0.2596388111457565 0.0 0.0 0.0 0.0 31 0.28467735477826134 0.0 0.0 0.0 0.0 32 0.3065225769040119 0.0 0.0 0.0 0.0 33 0.3225133762673797 0.0 0.0 0.0 0.0 34 0.3388065735007053 0.0 0.0 0.0 0.0 35 0.3543498240165356 0.0 0.0 0.0 0.0 36 0.37050996618707976 0.0 0.0 0.0 0.0 37 0.3863919023172628 0.0 0.0 0.0 0.0 38 0.4042938562187638 0.0 0.0 0.0 0.0 39 0.42486900729069166 0.0 0.0 0.0 0.0 40 0.44887939816534 0.0 0.0 0.0 0.0 41 0.4709423467574602 0.0 0.0 0.0 0.0 42 0.49250936284284963 0.0 0.0 0.0 0.0 43 0.512286183538089 0.0 0.0 0.0 0.0 44 0.5327645672916304 0.0 0.0 0.0 0.0 45 0.554343679291818 0.0 0.0 0.0 0.0 46 0.5767695053278876 0.0 0.0 0.0 0.0 47 0.5962439281531691 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACTTC 342890 0.0 49.15356 4 ACTTCGG 881365 0.0 49.124966 6 TCGGGGG 157280 0.0 49.12475 9 TCGTACT 11750 0.0 49.0983 2 CTATACT 16705 0.0 49.081715 2 TACTTCG 888455 0.0 49.078934 5 TTAGTAC 4725 0.0 49.074074 1 CGTACTT 33600 0.0 49.064434 3 TTCGGGG 449325 0.0 49.01195 8 TTCGGGC 86845 0.0 49.002647 8 TCGGGGC 107930 0.0 48.975773 9 CTTCGGG 844880 0.0 48.9639 7 CTACTTC 190300 0.0 48.889225 4 CGGGATA 8435 0.0 48.88441 10 TCGGGAT 60715 0.0 48.809933 9 TTTACTT 126225 0.0 48.746563 3 CTTACTT 79505 0.0 48.636944 3 GTACTTC 179870 0.0 48.615498 4 TCTACTT 70260 0.0 48.590878 3 ACGTTAC 2520 0.0 48.583336 1 >>END_MODULE