##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527991_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3716542 Sequences flagged as poor quality 0 Sequence length 59 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.52072141253886 31.0 31.0 34.0 30.0 34.0 2 31.993470543316878 33.0 31.0 34.0 30.0 34.0 3 32.18346355294788 34.0 31.0 34.0 30.0 34.0 4 35.89069624398164 37.0 35.0 37.0 35.0 37.0 5 35.763150799856426 37.0 35.0 37.0 33.0 37.0 6 35.937863745384824 37.0 35.0 37.0 35.0 37.0 7 36.099735991144456 37.0 35.0 37.0 35.0 37.0 8 35.96401977967692 37.0 35.0 37.0 35.0 37.0 9 37.57447648916654 39.0 37.0 39.0 35.0 39.0 10 36.75135919357295 38.0 37.0 39.0 32.0 39.0 11 37.7739350180894 39.0 37.0 39.0 35.0 39.0 12 37.8013537853198 39.0 37.0 39.0 35.0 39.0 13 37.81799371566365 39.0 38.0 39.0 35.0 39.0 14 38.24355328151814 40.0 38.0 40.0 35.0 40.0 15 37.62789738418132 40.0 37.0 40.0 33.0 40.0 16 37.07732940997303 39.0 36.0 40.0 32.0 40.0 17 37.035001622475946 39.0 36.0 40.0 32.0 40.0 18 37.04253685280565 39.0 36.0 40.0 32.0 40.0 19 37.16902405515665 40.0 36.0 40.0 32.0 40.0 20 37.28056564408528 40.0 36.0 40.0 32.0 40.0 21 37.2447912602629 40.0 36.0 40.0 32.0 40.0 22 37.21627308395815 40.0 36.0 40.0 32.0 40.0 23 37.16741691604723 40.0 36.0 40.0 32.0 40.0 24 37.11765210779267 39.0 36.0 40.0 32.0 40.0 25 37.01697142128355 39.0 36.0 40.0 31.0 40.0 26 36.87682178756489 39.0 35.0 40.0 31.0 40.0 27 36.72869134803266 39.0 35.0 40.0 31.0 40.0 28 36.713211905045064 39.0 35.0 40.0 31.0 40.0 29 36.69339536590734 39.0 35.0 40.0 31.0 40.0 30 36.641646724293714 39.0 35.0 40.0 30.0 40.0 31 36.650247730282615 39.0 35.0 40.0 31.0 40.0 32 36.504590288499365 39.0 35.0 40.0 30.0 40.0 33 36.38310881459163 39.0 35.0 40.0 30.0 40.0 34 36.31694946539014 39.0 35.0 40.0 30.0 40.0 35 36.190538678158354 39.0 35.0 40.0 30.0 40.0 36 36.015188581213394 38.0 35.0 40.0 30.0 40.0 37 35.854455835558966 38.0 35.0 40.0 29.0 40.0 38 35.62997512203548 38.0 34.0 40.0 28.0 40.0 39 35.50664972977569 38.0 34.0 40.0 28.0 40.0 40 35.32733196611259 38.0 34.0 40.0 28.0 40.0 41 35.16768275456056 37.0 34.0 40.0 27.0 40.0 42 35.030792602370695 37.0 34.0 40.0 27.0 40.0 43 34.85433798407229 37.0 33.0 40.0 27.0 40.0 44 34.70197107956805 37.0 33.0 40.0 26.0 40.0 45 34.48313378403903 36.0 33.0 40.0 26.0 40.0 46 34.25263403454071 36.0 33.0 39.0 26.0 40.0 47 34.14111746887295 36.0 33.0 39.0 25.0 40.0 48 33.94662538456447 35.0 33.0 39.0 25.0 40.0 49 33.81916415851079 35.0 33.0 39.0 24.0 40.0 50 33.599840389265076 35.0 33.0 39.0 24.0 40.0 51 33.40424163106458 35.0 32.0 38.0 24.0 40.0 52 33.24718138527696 35.0 32.0 38.0 24.0 40.0 53 32.999638373520334 35.0 32.0 38.0 23.0 40.0 54 32.823944139471585 35.0 32.0 37.0 23.0 40.0 55 32.687490414476684 35.0 31.0 37.0 23.0 40.0 56 32.47341130545545 35.0 31.0 37.0 23.0 39.0 57 32.32469241569179 35.0 31.0 36.0 23.0 39.0 58 32.135366693017325 35.0 31.0 36.0 22.0 39.0 59 31.652162951474786 34.0 30.0 36.0 21.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 5.0 13 8.0 14 23.0 15 115.0 16 396.0 17 1041.0 18 2008.0 19 3671.0 20 5975.0 21 9351.0 22 13944.0 23 19618.0 24 26103.0 25 33799.0 26 42792.0 27 53733.0 28 66581.0 29 80194.0 30 97703.0 31 119434.0 32 146761.0 33 186448.0 34 264750.0 35 369654.0 36 462856.0 37 699518.0 38 831396.0 39 178665.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.937759885398844 18.894149453981683 34.84787740862339 17.320213251996076 2 22.308586853047807 21.46874702344276 35.67127722490422 20.551388898605207 3 27.12612961188115 21.914537761176923 34.12257953764548 16.83675308929645 4 33.5171511582541 26.99894148915847 31.493576555841425 7.990330796746008 5 0.0 0.0 0.0 100.0 6 0.0 0.0 0.0 100.0 7 0.0 0.0 100.0 0.0 8 0.0 100.0 0.0 0.0 9 100.0 0.0 0.0 0.0 10 0.0 100.0 0.0 0.0 11 99.44634017320402 0.37798577279632517 0.0690157678831559 0.10665828611650292 12 99.50588477138157 0.37421883029977865 0.03960670967797485 0.08028968864067727 13 98.58231119142472 0.7993990112314081 0.13388789902011064 0.48440189832376446 14 65.48253726178798 23.79031368406438 3.989784051949366 6.737365002198279 15 33.89782760426224 25.507447514382992 17.132834769525005 23.46189011182976 16 28.8094416799272 15.173378909749976 29.819735657500978 26.19744375282184 17 21.543197951213788 16.38587697919195 31.75863477393771 30.312290295656553 18 23.337903890229143 16.991359172047567 34.36441724592377 25.30631969179953 19 24.408872548729438 17.30762090136476 30.208241962555515 28.075264587350286 20 26.958285416927886 17.92198231581938 27.00122856138852 28.118503705864217 21 29.920555182747833 19.02663820293165 21.98280014056077 29.070006473759747 22 30.021912842637054 19.125143749216342 23.12633625558382 27.72660715256279 23 29.696287570542722 20.341435667886977 20.90104188248108 29.06123487908922 24 29.817798372788467 20.490068456107853 21.476980483470925 28.21515268763275 25 30.88354712525783 19.39359221555952 22.806576651091255 26.91628400809139 26 31.281766760607038 17.81115348622456 22.638813176334345 28.268266576834055 27 30.906014246576525 21.256183839709063 21.446199181927717 26.3916027317867 28 31.18350337491141 20.434721308140738 20.316304780088586 28.06547053685926 29 30.767632923292677 20.277263111785096 19.95174546661924 29.003358498302994 30 30.106776675737823 20.47900978920728 19.776905521315243 29.637308013739656 31 29.016219916255487 19.23051051219117 20.726497911230386 31.026771660322954 32 30.046236528471898 20.587094132126047 20.57754224222409 28.789127097177968 33 31.53651970030206 20.084422562694034 20.54038404516887 27.83867369183504 34 28.584366865758547 20.650594019924974 22.07253409217493 28.69250502214155 35 31.319785973090035 21.60691309286966 19.660049583725947 27.41325135031435 36 33.48795735390586 21.05871533269367 20.17197706900662 25.281350244393845 37 32.45718735319014 20.195412832681562 20.531397196641393 26.8160026174869 38 30.527624872798427 23.595562756992923 21.91870830465524 23.95810406555341 39 31.475226164536817 23.590611918283177 22.637198772407256 22.29696314477275 40 32.52967408951655 22.705218991202038 20.33282551360916 24.432281405672263 41 32.22258755585165 23.592441576067216 18.636275333360956 25.548695534720178 42 32.00208688614309 23.42029230397504 19.895644930152816 24.68197587972906 43 32.309630834253994 22.459425993302375 19.424857838280854 25.806085334162777 44 30.01900691556829 24.533235464579707 20.433187624410003 25.014569995442 45 29.639702712898174 22.580371754173637 21.148933605485958 26.63099192744223 46 27.41946680543365 23.104918496817742 21.21622734251355 28.259387355235056 47 29.40747070798608 20.679545663684145 22.985237352356034 26.92774627597374 48 29.552793968156422 20.182336160872122 22.053161245049836 28.211708625921624 49 29.5073484976088 20.0388156517537 23.534430661620398 26.919405189017105 50 30.01217260561027 21.03778189510572 21.169920856538145 27.78012464274586 51 27.741325135031435 22.1232263754856 22.624122100597813 27.511326388885156 52 29.62339723323455 21.667964468045835 22.31178875416987 26.396849544549745 53 29.16848511331232 21.927856593575427 21.49385100450903 27.409807288603222 54 26.600398973023847 22.5016157492637 23.700606639182336 27.197378638530118 55 27.296260879064466 22.125540354447764 22.446860549403183 28.13133821708459 56 28.133840543171583 22.984107269607073 22.10966538249803 26.772386804723315 57 28.886852348231233 21.302624859345055 22.428052743652568 27.38247004877114 58 28.182918422555158 21.38043912863086 22.13926278782804 28.29737966098594 59 27.660201337695096 21.682009782211527 22.833483383209447 27.824305496883934 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.5 5 1.0 6 0.5 7 0.0 8 7.0 9 31.5 10 49.0 11 163.0 12 277.0 13 408.5 14 812.0 15 1084.0 16 1407.0 17 1730.0 18 1555.5 19 1527.0 20 1673.0 21 1972.0 22 2271.0 23 2598.5 24 2926.0 25 3847.0 26 7148.5 27 9529.0 28 11016.0 29 12503.0 30 15073.5 31 18364.5 32 19085.0 33 21352.5 34 23620.0 35 23986.0 36 29665.0 37 34978.0 38 36502.0 39 38026.0 40 40983.0 41 43940.0 42 54372.0 43 68269.5 44 71735.0 45 81230.0 46 90725.0 47 95896.5 48 111486.5 49 121905.0 50 136825.0 51 151745.0 52 158866.0 53 192919.0 54 219851.0 55 236119.5 56 252388.0 57 285976.0 58 325209.5 59 330855.0 60 325065.0 61 319275.0 62 305063.0 63 290851.0 64 270342.0 65 225152.0 66 200471.0 67 179604.0 68 158737.0 69 133177.5 70 101805.0 71 95992.0 72 86399.5 73 76807.0 74 58080.0 75 30740.5 76 22128.0 77 17170.5 78 12213.0 79 8445.5 80 4678.0 81 4564.0 82 3102.5 83 1755.0 84 1132.5 85 510.0 86 408.0 87 231.5 88 157.0 89 133.0 90 109.0 91 194.5 92 140.5 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 3716542.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.344290770473876 #Duplication Level Percentage of deduplicated Percentage of total 1 80.72274350381683 9.157422740976791 2 7.332460161764937 1.6636312027595468 3 3.011556862277204 1.0249193015246563 4 1.7814831127515824 0.8083864973497138 5 1.0791829384217932 0.6121282523995613 6 0.6823227672861477 0.46442807228450633 7 0.45669045629738203 0.36265805298365256 8 0.29982037964028585 0.2720999652442614 9 0.22732313914955232 0.23209378104324732 >10 1.4337772508492868 3.499413135707077 >50 0.5619814771666466 4.781820271677632 >100 2.1640245426636997 57.303480622401736 >500 0.22436295609530493 16.62661669139235 >1k 0.022270451819386125 3.1909014122552612 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.025642115708634533 0.0 0.0 0.0 0.0 9 0.025642115708634533 0.0 0.0 0.0 0.0 10 0.029086177419762778 0.0 0.0 0.0 0.0 11 0.029220711080353727 0.0 0.0 0.0 0.0 12 0.03191138429217267 0.0 0.0 0.0 0.0 13 0.03670078260921039 0.0 0.0 0.0 0.0 14 0.04856665147333193 0.0 0.0 0.0 0.0 15 0.06767043127724642 0.0 0.0 0.0 0.0 16 0.07872909817782228 0.0 0.0 0.0 0.0 17 0.08828098807977953 0.0 0.0 0.0 0.0 18 0.09909749439129169 0.0 0.0 0.0 0.0 19 0.11039832188093125 0.0 0.0 0.0 0.0 20 0.11965423772958841 0.0 0.0 0.0 0.0 21 0.13122413254040988 0.0 0.0 0.0 0.0 22 0.14357432258265881 0.0 0.0 0.0 0.0 23 0.15603213955338052 0.0 0.0 0.0 0.0 24 0.16744059397149286 0.0 0.0 0.0 0.0 25 0.1800329446028055 0.0 0.0 0.0 0.0 26 0.19563884923135538 0.0 0.0 0.0 0.0 27 0.21102950000295975 0.0 0.0 0.0 0.0 28 0.22545150841830927 0.0 0.0 0.0 0.0 29 0.24283325736665964 0.0 0.0 0.0 0.0 30 0.26465461711451127 0.0 0.0 0.0 0.0 31 0.2872831788259086 0.0 0.0 0.0 0.0 32 0.3059295441838139 0.0 0.0 0.0 0.0 33 0.31900621599325396 0.0 0.0 0.0 0.0 34 0.33197526087422125 0.0 0.0 0.0 0.0 35 0.3448904922909522 0.0 0.0 0.0 0.0 36 0.3571868688689648 0.0 0.0 0.0 0.0 37 0.3687836704119044 0.0 0.0 0.0 0.0 38 0.3828020778454811 0.0 0.0 0.0 0.0 39 0.3983810757419128 0.0 0.0 0.0 0.0 40 0.4183189642414912 0.0 0.0 0.0 0.0 41 0.43416702945910474 0.0 0.0 0.0 0.0 42 0.4485083176780997 0.0 0.0 0.0 0.0 43 0.4612082952378851 0.0 0.0 0.0 0.0 44 0.4745271276363889 0.0 0.0 0.0 0.0 45 0.48754998598159255 0.0 0.0 0.0 0.0 46 0.5031558906101424 0.0 0.0 0.0 0.0 47 0.5144298113676639 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATACGC 35 3.3447577E-8 53.0 13 ACGCATT 15 0.006697438 53.0 35 ACGTTAG 35 3.3447577E-8 53.0 29 CAATTCG 30 7.014751E-7 53.0 25 CGACATA 20 3.1391587E-4 53.0 19 TAACGGG 30 7.014751E-7 53.0 35 TATGCGT 15 0.006697438 53.0 45 ATCGTAC 30 7.014751E-7 53.0 41 ACGATTA 25 1.4793777E-5 53.0 49 CCGTATA 20 3.1391587E-4 53.0 23 TCGGATA 35 3.3447577E-8 53.0 35 ATATCGT 20 3.1391587E-4 53.0 30 ATATCGC 15 0.006697438 53.0 19 CTAGTCG 15 0.006697438 53.0 27 CACTACG 20 3.1391587E-4 53.0 41 ACGTCTA 25 1.4793777E-5 53.0 19 CGTAACA 15 0.006697438 53.0 44 ATACGCC 30 7.014751E-7 53.0 14 CGACTAA 25 1.4793777E-5 53.0 18 CGATATC 35 3.3447577E-8 53.0 44 >>END_MODULE