##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527988_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10282621 Sequences flagged as poor quality 0 Sequence length 59 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.331325447082023 31.0 31.0 33.0 30.0 34.0 2 31.896510627008425 31.0 31.0 34.0 30.0 34.0 3 32.13067806350151 33.0 31.0 34.0 30.0 34.0 4 35.79728174363326 37.0 35.0 37.0 35.0 37.0 5 35.60003660545303 37.0 35.0 37.0 33.0 37.0 6 35.2673287287356 37.0 35.0 37.0 32.0 37.0 7 35.78726960762241 37.0 35.0 37.0 35.0 37.0 8 35.64540110930861 37.0 35.0 37.0 33.0 37.0 9 37.82728041809574 39.0 37.0 39.0 35.0 39.0 10 37.94670677835933 39.0 38.0 39.0 35.0 39.0 11 37.77238838230058 39.0 37.0 39.0 35.0 39.0 12 37.819019100285814 39.0 37.0 39.0 35.0 39.0 13 37.84615994307288 39.0 38.0 39.0 35.0 39.0 14 38.14254099222367 40.0 38.0 40.0 34.0 40.0 15 37.67755050001357 40.0 37.0 40.0 33.0 40.0 16 37.0211283679521 39.0 35.0 40.0 32.0 40.0 17 36.914875205455886 39.0 35.0 40.0 32.0 40.0 18 36.81079152873572 39.0 35.0 40.0 31.0 40.0 19 36.95590676735046 39.0 35.0 40.0 32.0 40.0 20 37.01870486133837 39.0 35.0 40.0 32.0 40.0 21 36.928569962852855 39.0 35.0 40.0 31.0 40.0 22 36.90441347590269 39.0 35.0 40.0 31.0 40.0 23 36.89475835003546 39.0 35.0 40.0 31.0 40.0 24 36.88207092335699 39.0 35.0 40.0 31.0 40.0 25 36.8655278649286 39.0 35.0 40.0 31.0 40.0 26 36.75582169176516 39.0 35.0 40.0 31.0 40.0 27 36.68140700702671 39.0 35.0 40.0 31.0 40.0 28 36.70566521901371 39.0 35.0 40.0 31.0 40.0 29 36.669313300568014 39.0 35.0 40.0 31.0 40.0 30 36.633980674771536 39.0 35.0 40.0 31.0 40.0 31 36.64623649942948 39.0 35.0 40.0 31.0 40.0 32 36.54788589407312 39.0 35.0 40.0 31.0 40.0 33 36.40572330731629 39.0 35.0 40.0 30.0 40.0 34 36.30617106280587 39.0 35.0 40.0 30.0 40.0 35 36.15119578947819 38.0 35.0 40.0 30.0 40.0 36 36.01546444238293 38.0 35.0 40.0 30.0 40.0 37 35.882484436604244 38.0 35.0 40.0 30.0 40.0 38 35.588647194134644 38.0 34.0 40.0 28.0 40.0 39 35.4689528088218 38.0 34.0 40.0 28.0 40.0 40 35.40286119657624 38.0 34.0 40.0 28.0 40.0 41 35.30933523660942 38.0 34.0 40.0 28.0 40.0 42 35.20846046936865 38.0 34.0 40.0 28.0 40.0 43 35.02334463168486 37.0 34.0 40.0 27.0 40.0 44 34.89751717971517 37.0 34.0 40.0 26.0 40.0 45 34.67784721424625 37.0 34.0 40.0 26.0 40.0 46 34.4968877098553 37.0 33.0 40.0 25.0 40.0 47 34.388436469651076 37.0 33.0 40.0 25.0 40.0 48 34.20858125569347 36.0 33.0 40.0 24.0 40.0 49 34.10425668708396 36.0 33.0 39.0 24.0 40.0 50 33.89640578992457 36.0 33.0 39.0 24.0 40.0 51 33.70986278692952 35.0 33.0 39.0 24.0 40.0 52 33.53200657692236 35.0 33.0 39.0 23.0 40.0 53 33.327518538318195 35.0 32.0 39.0 23.0 40.0 54 33.164435701753476 35.0 32.0 38.0 23.0 40.0 55 33.03795627593393 35.0 32.0 38.0 23.0 40.0 56 32.83256370141426 35.0 32.0 38.0 22.0 40.0 57 32.66701933291133 35.0 32.0 38.0 22.0 40.0 58 32.472995941404434 35.0 31.0 37.0 21.0 40.0 59 31.866980121118925 34.0 31.0 37.0 20.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 4.0 13 11.0 14 35.0 15 206.0 16 735.0 17 2202.0 18 4885.0 19 9469.0 20 16185.0 21 25360.0 22 37233.0 23 52751.0 24 72193.0 25 95501.0 26 123594.0 27 157612.0 28 193914.0 29 228852.0 30 270651.0 31 328159.0 32 406040.0 33 516216.0 34 748630.0 35 1094288.0 36 1055141.0 37 1634340.0 38 2560017.0 39 648395.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.97124186527929 21.01027549298958 33.9967309891126 16.02175165261853 2 26.227126332867854 21.46472188365204 34.049519086621984 18.258632696858125 3 19.79327060678401 22.567086737904667 35.47298884204718 22.166653813264148 4 22.336629931220845 20.79717807356704 34.35017200381109 22.516019991401027 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 0.0 0.0 100.0 0.0 8 0.0 0.0 0.0 100.0 9 0.0 0.0 100.0 0.0 10 0.0 0.0 100.0 0.0 11 99.4768843468995 0.32611335183899126 0.1398767882235473 0.057125513037969596 12 99.05378210477659 0.6680689680189515 0.15147888850517782 0.12667003869927715 13 96.5165593480495 1.9323964191620018 0.507263663612614 1.043780569175894 14 53.48362056716862 25.215963906478706 7.3546618123919965 13.94575371396067 15 34.57881993316684 23.207322335424013 19.64717944967533 22.56667828173381 16 31.84598557118851 16.633852400083597 26.954761825802976 24.565400202924916 17 24.458812592625947 16.720435383157657 29.119122449422186 29.701629574794207 18 22.33586164461376 19.81519108795316 32.942029079939836 24.906918187493247 19 27.26033566733618 19.245803185783082 29.766574105959947 23.727287040920793 20 31.284698716407032 18.913990897845988 25.83642828029935 23.96488210544763 21 31.584826475662187 20.60467851533184 23.01841135640417 24.7920836526018 22 30.793578796690063 21.404085592574113 24.29629566236079 23.50603994837503 23 28.97837039797538 23.85453086328865 22.297087483823432 24.870011254912537 24 28.388141505944837 25.95300361649039 21.97064347698899 23.68821140057579 25 28.091543975023487 23.218029722188536 25.157817253013604 23.532609049774372 26 27.52847741835472 21.32288061574962 25.316220446129446 25.832421519766214 27 29.831615888594943 22.098519433906976 23.685206330175934 24.384658347322148 28 32.26672460260861 21.200032559791907 21.313865404550068 25.219377433049416 29 30.926035297809772 20.342984536724636 20.15645621870144 28.574523946764156 30 26.82630236006948 20.901295496547036 22.676173710963383 29.5962284324201 31 24.84509542849046 21.41929572236495 22.570967071527775 31.164641777616815 32 25.963487324875633 25.323485130882485 20.724735454122055 27.988292090119828 33 30.084761463054992 24.58089236197658 20.453588632703664 24.88075754226476 34 28.875896524825723 23.04654620645845 23.640869385344455 24.43668788337137 35 31.950861555628666 22.22711505169742 22.50518617772648 23.316837214947434 36 34.41104169841522 21.21396869533556 21.160626264451444 23.214363341797778 37 32.79896244352486 21.707675504134595 22.691704770602747 22.801657281737796 38 28.892322297982197 24.07651706700072 25.652418775329757 21.37874185968733 39 27.221853260953605 27.31186922089222 25.247881838686848 20.218395679467328 40 28.539056335928358 29.335312465566904 20.783232212876467 21.342398985628275 41 30.50449880434181 27.62721683508514 20.180574583075657 21.687709777497393 42 30.241550281781272 27.394377367404672 19.62575495099936 22.738317399814697 43 29.78383624175198 25.143696339678375 20.010238634682732 25.06222878388691 44 28.397691600225272 24.493122910977657 20.354275432304664 26.754910056492403 45 24.97029697000405 25.632589200749496 22.172556977447677 27.224556851798777 46 25.316852580679576 24.38107949325371 22.311247297746363 27.990820628320346 47 26.4189451308183 21.712226872895542 22.182350200401242 29.68647779588492 48 27.36507549971938 21.530998759946517 21.139678297974807 29.964247442359298 49 28.810951993659984 22.494906697426657 21.5485137495586 27.14562755935476 50 27.665990995875468 25.300407357229247 20.803761998035323 26.229839648859954 51 25.85928237557331 25.185067114697702 22.335472638736757 26.62017787099223 52 26.64397530551792 23.640431753732827 23.586437738004737 26.129155202744514 53 28.01710770045886 24.413230828988056 22.813512235839482 24.7561492347136 54 25.632375247517146 23.56771683017394 23.087226496046096 27.71268142626282 55 24.52754020594555 24.41086761828526 23.97113537492046 27.090456800848735 56 24.46883921910571 23.88767416400935 25.003343019255496 26.64014359762944 57 25.25697485106181 22.796590480189828 26.300103835393717 25.646330833354646 58 25.560739815266942 22.57440004839233 25.495104798669523 26.3697553376712 59 24.98069315206697 22.88907662744742 23.219293991288797 28.910936229196814 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 1.5 4 13.0 5 23.0 6 45.5 7 68.0 8 312.5 9 1138.0 10 1719.0 11 2780.0 12 3841.0 13 5115.0 14 6812.0 15 7235.0 16 7652.0 17 8069.0 18 9645.5 19 12168.5 20 13115.0 21 16399.0 22 19683.0 23 25142.5 24 30602.0 25 37824.0 26 50433.0 27 55820.0 28 64893.0 29 73966.0 30 81339.5 31 93036.0 32 97359.0 33 100583.0 34 103807.0 35 116485.5 36 138878.5 37 148593.0 38 165051.0 39 181509.0 40 196742.5 41 211976.0 42 241301.5 43 303439.0 44 336251.0 45 344954.0 46 353657.0 47 384633.5 48 447909.5 49 480209.0 50 510256.5 51 540304.0 52 591519.5 53 689206.0 54 735677.0 55 839210.5 56 942744.0 57 965865.0 58 937772.0 59 886558.0 60 772285.5 61 658013.0 62 581346.5 63 504680.0 64 433395.0 65 318327.0 66 274544.0 67 234787.5 68 195031.0 69 174774.5 70 137306.0 71 120094.0 72 101511.5 73 82929.0 74 65178.5 75 36251.0 76 25074.0 77 19412.0 78 13750.0 79 10613.0 80 7476.0 81 5298.0 82 2156.0 83 1192.0 84 799.0 85 406.0 86 291.0 87 161.0 88 146.0 89 119.0 90 92.0 91 48.5 92 2.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 1.0282621E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.556092133226487 #Duplication Level Percentage of deduplicated Percentage of total 1 80.68640980135893 10.131059953651313 2 7.286821268886308 1.8298799842098163 3 3.0643548853088527 1.154289668065219 4 1.7602323777745454 0.8840655964490209 5 1.0389497835156698 0.6522574601809231 6 0.7016960963343826 0.5286336501059926 7 0.4772578173191061 0.41947451878928904 8 0.32549940294985974 0.32696003941989216 9 0.24476035843117583 0.27659102499210436 >10 1.7107385713672076 4.529199606597056 >50 0.5955194016936051 5.563799231728407 >100 1.8949263509420489 54.681850244028475 >500 0.19209460609726553 15.77677685395387 >1k 0.020739278021365062 3.2451621678289015 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0021200820296692837 0.0 0.0 0.0 0.0 12 0.0029467195183018025 0.0 0.0 0.0 0.0 13 0.006097667122030463 0.0 0.0 0.0 0.0 14 0.03265704337444704 0.0 0.0 0.0 0.0 15 0.06554749027509621 0.0 0.0 0.0 0.0 16 0.08234281901472397 0.0 0.0 0.0 0.0 17 0.09615252764834958 0.0 0.0 0.0 0.0 18 0.11366751726043389 0.0 0.0 0.0 0.0 19 0.13104635481556695 0.0 0.0 0.0 0.0 20 0.1513330113013015 0.0 0.0 0.0 0.0 21 0.16915920561498862 0.0 0.0 0.0 0.0 22 0.187889838592709 0.0 0.0 0.0 0.0 23 0.20768051258526402 0.0 0.0 0.0 0.0 24 0.22938704052206144 0.0 0.0 0.0 0.0 25 0.2508698900795818 0.0 0.0 0.0 0.0 26 0.27545506150620547 0.0 0.0 0.0 0.0 27 0.30108082365381356 0.0 0.0 0.0 0.0 28 0.32768882564085555 0.0 0.0 0.0 0.0 29 0.35498731305957887 0.0 0.0 0.0 0.0 30 0.3871580990877715 0.0 0.0 0.0 0.0 31 0.4164502416261379 0.0 0.0 0.0 0.0 32 0.44464344256196936 0.0 0.0 0.0 0.0 33 0.4671085319589237 0.0 0.0 0.0 0.0 34 0.49007932899598267 0.0 0.0 0.0 0.0 35 0.511124546941874 0.0 0.0 0.0 0.0 36 0.5318391098923124 0.0 0.0 0.0 0.0 37 0.5532733337152075 0.0 0.0 0.0 0.0 38 0.5800952889346014 0.0 0.0 0.0 0.0 39 0.6146390108125156 0.0 0.0 0.0 0.0 40 0.6593455112271472 0.0 0.0 0.0 0.0 41 0.6955522332292515 0.0 0.0 0.0 0.0 42 0.7235412060796561 0.0 0.0 0.0 0.0 43 0.7483306055917066 0.0 0.0 0.0 0.0 44 0.7720988646766228 0.0 0.0 0.0 0.0 45 0.7956823459699623 0.0 0.0 0.0 0.0 46 0.8190226985901746 0.0 0.0 0.0 0.0 47 0.8417892675418067 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTCGAT 3720 0.0 49.794357 1 CCGATCT 41045 0.0 49.319893 3 CTACGAT 3010 0.0 49.302322 1 AGATCTT 231485 0.0 49.26114 4 TTGGGGC 160560 0.0 49.124683 9 TACCGAT 3560 0.0 48.98034 1 TTCGATC 31350 0.0 48.917225 2 TAGATCT 86480 0.0 48.81724 3 TTGGGAC 39985 0.0 48.69876 9 TTAGATC 31730 0.0 48.657104 2 GATCTTG 1115660 0.0 48.596233 5 ATGCGAT 3955 0.0 48.57775 1 CTGATCT 98455 0.0 48.53466 3 CGATCTT 252165 0.0 48.51897 4 CGGATCT 51365 0.0 48.516697 3 CTCGATC 18330 0.0 48.48936 2 CGCGATC 10325 0.0 48.482807 2 ATCTTGG 1108750 0.0 48.482037 6 TCTTGGG 1072200 0.0 48.47014 7 CTTGGGG 581115 0.0 48.36547 8 >>END_MODULE