##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527987_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1323458 Sequences flagged as poor quality 0 Sequence length 52 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.770011590847613 31.0 31.0 34.0 30.0 34.0 2 32.320484669706175 34.0 31.0 34.0 30.0 34.0 3 32.46842060722743 34.0 31.0 34.0 30.0 34.0 4 35.882059725355845 37.0 35.0 37.0 35.0 37.0 5 35.923796599514304 37.0 35.0 37.0 35.0 37.0 6 35.87847593199029 37.0 35.0 37.0 35.0 37.0 7 35.97742353742998 37.0 35.0 37.0 35.0 37.0 8 35.631679282606626 37.0 35.0 37.0 32.0 37.0 9 37.37505761421972 39.0 37.0 39.0 34.0 39.0 10 37.75116021815577 39.0 38.0 39.0 35.0 39.0 11 38.08235924373875 39.0 38.0 39.0 37.0 39.0 12 38.13363476589359 39.0 39.0 39.0 37.0 39.0 13 38.14805078816253 39.0 39.0 39.0 37.0 39.0 14 38.70314207175445 40.0 39.0 40.0 36.0 40.0 15 38.108549723527304 40.0 38.0 40.0 34.0 40.0 16 37.62912990060886 40.0 37.0 40.0 33.0 40.0 17 37.58707340920528 40.0 37.0 40.0 33.0 40.0 18 37.60406828172862 40.0 37.0 40.0 33.0 40.0 19 37.72109277362787 40.0 37.0 40.0 33.0 40.0 20 37.7696609941532 40.0 37.0 40.0 33.0 40.0 21 37.590791698716544 40.0 37.0 40.0 33.0 40.0 22 37.65417111838834 40.0 37.0 40.0 33.0 40.0 23 37.59787692544833 40.0 37.0 40.0 33.0 40.0 24 37.58130367567388 40.0 37.0 40.0 33.0 40.0 25 37.70686489484366 40.0 37.0 40.0 33.0 40.0 26 37.67634333692494 40.0 37.0 40.0 33.0 40.0 27 37.589539675607384 40.0 37.0 40.0 33.0 40.0 28 37.548981531714645 40.0 37.0 40.0 33.0 40.0 29 37.51487013565976 40.0 37.0 40.0 33.0 40.0 30 37.47298138664015 40.0 36.0 40.0 33.0 40.0 31 37.3898000541007 40.0 36.0 40.0 33.0 40.0 32 37.28954980059813 40.0 36.0 40.0 33.0 40.0 33 37.20982532124178 40.0 36.0 40.0 33.0 40.0 34 37.12355057735115 40.0 35.0 40.0 33.0 40.0 35 37.030638675348975 40.0 35.0 40.0 32.0 40.0 36 36.94031997993136 40.0 35.0 40.0 32.0 40.0 37 36.7667700826169 39.0 35.0 40.0 32.0 40.0 38 36.51914227727665 39.0 35.0 40.0 31.0 40.0 39 36.33802508277558 39.0 35.0 40.0 31.0 40.0 40 36.04567579779638 39.0 35.0 40.0 30.0 40.0 41 35.82873502596985 38.0 35.0 40.0 30.0 40.0 42 35.59251219154669 38.0 35.0 40.0 29.0 40.0 43 35.32747771368642 38.0 35.0 40.0 28.0 40.0 44 35.09168254678275 38.0 35.0 40.0 27.0 40.0 45 34.8418544449465 37.0 34.0 40.0 26.0 40.0 46 34.629092876388974 37.0 34.0 40.0 26.0 40.0 47 34.44330836339348 37.0 34.0 40.0 25.0 40.0 48 34.251609797968655 36.0 34.0 40.0 24.0 40.0 49 34.017353025181 36.0 34.0 39.0 24.0 40.0 50 33.80970986612344 36.0 34.0 39.0 23.0 40.0 51 33.54245469066642 35.0 33.0 39.0 23.0 40.0 52 32.80909934429351 35.0 33.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 3.0 14 7.0 15 11.0 16 42.0 17 116.0 18 290.0 19 616.0 20 1019.0 21 1744.0 22 2672.0 23 3956.0 24 5885.0 25 8191.0 26 11130.0 27 14422.0 28 18947.0 29 24281.0 30 30260.0 31 34789.0 32 38056.0 33 45592.0 34 62618.0 35 104996.0 36 118594.0 37 217820.0 38 397445.0 39 179956.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.832951253458745 21.55391406451886 34.67824441727656 14.93489026474584 2 23.419708067804194 20.80360691461308 34.591501959261265 21.185183058321456 3 25.610786288646864 20.531743357174918 35.48189666766909 18.37557368650913 4 26.602808702656223 18.251429210447174 34.11955649518156 21.026205591715037 5 100.0 0.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 100.0 0.0 0.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 100.0 0.0 0.0 10 0.0 0.0 100.0 0.0 11 99.62552646173887 0.2434531356491857 0.10230774229329528 0.028712660318650083 12 99.5950003702422 0.29407808936891083 0.06702139395432269 0.043900146434567626 13 98.1524914277597 1.1182070001465858 0.3864875198155136 0.3428140522781985 14 54.440715156808906 29.708158475750647 5.895086961580949 9.9560394058595 15 29.837289887552153 27.36580987080814 20.55977598080181 22.237124260837895 16 29.19699756244626 20.77980563040157 28.812625712338434 21.210571094813737 17 23.36477621503667 20.76106684156203 29.877563171630683 25.99659377177062 18 20.47537587139146 24.12581283274573 31.964898017164128 23.433913278698682 19 21.83748936498174 24.87309759735481 31.102913730545286 22.186499307118172 20 24.88057800096414 24.194723217510493 28.913195583086125 22.01150319843924 21 25.974228120575038 25.177300677467663 22.744733871418664 26.103737330538635 22 27.502572805483815 23.80030193629114 24.223133639299473 24.473991618925574 23 26.324824814992244 25.796360745864245 23.068733575224904 24.810080863918614 24 27.182124404401197 27.363543081835616 22.359908663516332 23.094423850246855 25 29.025854995020623 25.540515830498588 21.9957867948964 23.437842379584392 26 26.99307420409261 25.59189638054249 21.7073756779588 25.7076537374061 27 27.47129111766297 28.295268909175807 22.65655578038744 21.57688419277378 28 29.785984897140672 25.919598506337188 19.813397931781743 24.4810186647404 29 29.01580556390909 25.716569774031363 19.960210297568945 25.307414364490597 30 28.96450057349761 28.281063698281322 18.916882893148102 23.837552835072966 31 25.95488485467616 27.60299155696667 20.89979432668056 25.542329261676606 32 24.979787798328317 30.850166760108742 21.253942323821384 22.916103117741553 33 27.599742492772723 28.848743216634 20.842897923470183 22.708616367123096 34 26.595177179782052 29.09264971007769 19.951445380208515 24.36072772993174 35 24.758020277182954 29.981230987307494 19.617622924187998 25.643125811321553 36 28.463464650937166 30.04900797758599 20.619090292249545 20.8684370792273 37 28.21396674469458 29.92962375836634 19.385654852666274 22.470754644272805 38 27.34828003608728 30.20768320566274 20.215526295507676 22.2285104627423 39 27.957063994475078 28.606347915838658 21.833711383360864 21.6028767063254 40 27.079741102475484 28.353903183931788 21.35496555236358 23.211390161229144 41 27.841004399081797 31.31999655448076 19.498012026071095 21.34098702036634 42 29.472941340034968 27.707188290070405 19.745545381870826 23.074324988023797 43 27.68013794166494 27.538916988676633 21.14702544395062 23.633919625707804 44 26.94630279162618 28.305545019184592 21.16546199426049 23.58269019492874 45 24.54781337979747 29.197450920240765 22.667587486720393 23.58714821324137 46 26.53646734539366 29.020490261118976 20.91883535404977 23.524207039437595 47 28.082719663185387 27.81198950023348 20.600049264880337 23.505241571700804 48 29.410000166231193 26.833643379691686 20.727442805136242 23.02891364894088 49 27.272493724772527 26.412398428964124 21.688788008384098 24.62631983787925 50 26.503296666762377 28.52542354951952 20.736736639923596 24.234543143794514 51 25.72389905837586 28.982181527483302 21.869980006921264 23.42393940721957 52 27.112005065517756 27.313522605175226 21.17755153544729 24.39692079385972 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.5 8 1.0 9 8.0 10 15.0 11 48.0 12 81.0 13 240.5 14 622.5 15 845.0 16 968.0 17 1091.0 18 1543.5 19 1996.0 20 2533.0 21 3070.0 22 3876.0 23 4682.0 24 6803.0 25 8924.0 26 10589.0 27 12254.0 28 15167.0 29 18080.0 30 19195.5 31 20311.0 32 22078.0 33 23845.0 34 25001.0 35 26157.0 36 26743.0 37 27329.0 38 28012.0 39 29115.0 40 29535.0 41 32361.0 42 35187.0 43 41269.5 44 47352.0 45 54618.5 46 61885.0 47 62232.5 48 62580.0 49 67338.5 50 72097.0 51 78491.0 52 84885.0 53 86110.0 54 87335.0 55 87577.0 56 87819.0 57 96366.5 58 104914.0 59 110549.5 60 116185.0 61 106424.0 62 96663.0 63 89653.5 64 71842.5 65 61041.0 66 53348.5 67 45656.0 68 36874.0 69 28092.0 70 23279.0 71 18466.0 72 14542.0 73 10618.0 74 8298.5 75 5979.0 76 5481.0 77 4983.0 78 3290.5 79 1598.0 80 851.5 81 105.0 82 73.0 83 41.0 84 24.5 85 8.0 86 7.0 87 6.0 88 5.0 89 4.0 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1323458.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.031464819155634 #Duplication Level Percentage of deduplicated Percentage of total 1 81.93204876017047 11.49626659739676 2 6.199204632352353 1.7396784341119735 3 2.7409182077227703 1.153772922115355 4 1.6756303573925733 0.9404619363865229 5 1.0907874192686482 0.76526726493228 6 0.7733550542863823 0.6510782542161341 7 0.5775965189831761 0.5673167665045437 8 0.4178317850709667 0.4690233594038613 9 0.32033815101603086 0.4045332146593321 >10 2.106724331223769 5.7127074443294745 >50 0.4347391628473864 4.506185979451866 >100 1.5329705143795611 51.20889226117982 >500 0.17834062914811727 16.534572667753935 >1k 0.01951447613778791 3.8502428975581546 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATTGGCGAATGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCC 2863 0.21632722761130313 No Hit GGTAGCGAATGGGAGGATGGCTCCTCTGCTGCTCAGCAGACAGTTTGGAGAG 1920 0.1450744942416004 No Hit ACTGGCGAATGGGGCCTTTTGTGACTGGCGGTGAACGAGTGCGCAGTGCCAT 1856 0.1402386777668804 No Hit TTGTGCGAATGGGGCCCCCTTCCACTTGGTCACGTTGAGCCGCTCCCGGGCC 1815 0.1371407328377629 No Hit TGGCGCGAATGGGGTACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGC 1812 0.1369140539405104 No Hit TATTGCGAATGGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATC 1798 0.1358562190866654 No Hit TAATGCGAATGGGACACTGTCCTGGGGAGCTCGGCCCGGCAGGAGCTGCACG 1794 0.13555398055699538 No Hit CTTTGCGAATGGGGGAAGCCAAGGCGAGCAGGGGATCCAAGGTCCATCTGGT 1708 0.12905585216909035 No Hit AGTAGCGAATGGGATCGTGGACATGCTCTACCTCAAAGACTTGGCTATCGTT 1636 0.12361555863503035 No Hit GGCTGCGAATGGGAGCCAGGGTATTGTGGCTCAGGCCTGTAGTCCTAGGACT 1600 0.12089541186800035 No Hit TTAAGCGAATGGGCAAGGCAAAAAAGCACACCCACGACCTTACCAACACCAA 1584 0.11968645774932034 No Hit CCTTGCGAATGGGGCTCTCGAACCAGGCTGCTTCAGCCGTGAACAACGCCGA 1432 0.1082013936218603 No Hit ACATGCGAATGGGCCCGGCCGCCATCGGAGAGCATCAGCCATGGCTCTGCGC 1407 0.1063124028114228 No Hit CAGGGCGAATGGTCTGATGCTGTGGCTTAATTAAGAGCACCCTCTGGGCCGG 1365 0.10313889824988778 No Hit TGCTGCGAATGGGGTTGCAAACTTGACAGGCCAGATCCCCTTGTAAGTTTCT 1350 0.10200550376362529 No Hit GGCCGCGAATGGGCGTGGCTGCACACTGCCCTCTGCAGGCCACATGGAGTAG 1342 0.1014010267042853 No Hit GGCAGCGAATGGGGGCCTGGAGCTGCGGCACGTGTGCACAGGTCCCAACCCC 1334 0.10079654964494529 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.014809687953830043 0.0 0.0 0.0 0.0 12 0.019494385163715055 0.0 0.0 0.0 0.0 13 0.040802201505450116 0.0 0.0 0.0 0.0 14 0.09014264147407776 0.0 0.0 0.0 0.0 15 0.1697069344097055 0.0 0.0 0.0 0.0 16 0.22297647526404313 0.0 0.0 0.0 0.0 17 0.2560715942629082 0.0 0.0 0.0 0.0 18 0.2862954472299083 0.0 0.0 0.0 0.0 19 0.3174260157859184 0.0 0.0 0.0 0.0 20 0.357548180599611 0.0 0.0 0.0 0.0 21 0.39502575827869113 0.0 0.0 0.0 0.0 22 0.4406637762588613 0.0 0.0 0.0 0.0 23 0.4819948951912339 0.0 0.0 0.0 0.0 24 0.5280107113334915 0.0 0.0 0.0 0.0 25 0.5826403255713442 0.0 0.0 0.0 0.0 26 0.6558576093839019 0.0 0.0 0.0 0.0 27 0.7231812418678946 0.0 0.0 0.0 0.0 28 0.7945095348700147 0.0 0.0 0.0 0.0 29 0.8770962131023425 0.0 0.0 0.0 0.0 30 0.9811418269412403 0.0 0.0 0.0 0.0 31 1.0704533124587257 0.0 0.0 0.0 0.0 32 1.1374747064130482 0.0 0.0 0.0 0.0 33 1.200566999481661 0.0 0.0 0.0 0.0 34 1.2558010907788535 0.0 0.0 0.0 0.0 35 1.3072572004551712 0.0 0.0 0.0 0.0 36 1.3544064110836913 0.0 0.0 0.0 0.0 37 1.394377456632549 0.0 0.0 0.0 0.0 38 1.438655401229204 0.0 0.0 0.0 0.0 39 1.4903381898027743 0.0 0.0 0.0 0.0 40 1.5402831068307419 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTTAGG 35 1.01972546E-7 46.000004 25 TCGCCCG 55 1.8189894E-12 46.000004 26 AACGTTC 35 1.01972546E-7 46.000004 46 AGCGTAT 55 1.8189894E-12 46.000004 18 CTGTCGG 55 1.8189894E-12 46.000004 19 ACCGGTT 55 1.8189894E-12 46.000004 45 CGAACTA 35 1.01972546E-7 46.000004 26 GTTTCGC 35 1.01972546E-7 46.000004 18 CGAAACC 55 1.8189894E-12 46.000004 44 CGTGCCG 70 0.0 46.000004 30 TAGCGTA 55 1.8189894E-12 46.000004 17 GACCGTC 35 1.01972546E-7 46.000004 37 CCTACGC 75 0.0 46.000004 30 AGGAATA 55 1.8189894E-12 46.000004 20 CACGAAG 35 1.01972546E-7 46.000004 19 GAATAAT 35 1.01972546E-7 46.000004 23 ATCCGGT 35 1.01972546E-7 46.000004 23 CTAACGG 75 0.0 46.000004 26 CCCGTAC 55 1.8189894E-12 46.000004 20 CTTATCG 75 0.0 46.000004 17 >>END_MODULE