SRR1527985_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1527985_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1330338
Sequences flagged as poor quality	0
Sequence length	59
%GC	52

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATTGGCGAATGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCCCCTGTCT	2717	0.2042338112569888	No Hit
ACTGGCGAATGGGGCCTTTTGTGACTGGCGGTGAACGAGTGCGCAGTGCCATGAAGGCC	1839	0.13823554615443595	No Hit
GGTAGCGAATGGGAGGATGGCTCCTCTGCTGCTCAGCAGACAGTTTGGAGAGCTTTCTC	1831	0.13763419521956075	No Hit
TATTGCGAATGGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCCCCTGTC	1819	0.13673216881724795	No Hit
TGGCGCGAATGGGGTACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCATAATGG	1734	0.13034281513419899	No Hit
TTGTGCGAATGGGGCCCCCTTCCACTTGGTCACGTTGAGCCGCTCCCGGGCCTGGCATC	1665	0.1251561633209004	No Hit
TAATGCGAATGGGACACTGTCCTGGGGAGCTCGGCCCGGCAGGAGCTGCACGCACCTCG	1656	0.12447964351916582	No Hit
CTTTGCGAATGGGGGAAGCCAAGGCGAGCAGGGGATCCAAGGTCCATCTGGTCCACCTG	1605	0.12064603130933643	No Hit
TTAAGCGAATGGGCAAGGCAAAAAAGCACACCCACGACCTTACCAACACCAAAGAAACA	1568	0.11786478323553863	No Hit
GGCTGCGAATGGGAGCCAGGGTATTGTGGCTCAGGCCTGTAGTCCTAGGACTTCACAGT	1492	0.11215194935422428	No Hit
AGTAGCGAATGGGATCGTGGACATGCTCTACCTCAAAGACTTGGCTATCGTTGAGCCCG	1428	0.10734114187522269	No Hit
ACATGCGAATGGGCCCGGCCGCCATCGGAGAGCATCAGCCATGGCTCTGCGCTACCCCA	1416	0.10643911547290989	No Hit
CCTTGCGAATGGGGCTCTCGAACCAGGCTGCTTCAGCCGTGAACAACGCCGAAATGGCC	1406	0.1056874268043159	No Hit
CCTAGCGAATGGGGAGAAACTGCCAGCCGAGATCACAAGCATTGGGGCTGAAGCAGGAG	1380	0.10373303626597151	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCGGTA	55	0.0	53.000004	39
ATAGACG	110	0.0	53.000004	14
ATCACAC	75	0.0	53.000004	48
ACGATTG	75	0.0	53.000004	25
ATATCGA	55	0.0	53.000004	15
TACGCCC	55	0.0	53.000004	21
TCGTACC	55	0.0	53.000004	50
ACGTCAG	55	0.0	53.000004	17
CCGGTCA	55	0.0	53.000004	32
TAGCTAG	55	0.0	53.000004	22
TGTCGCA	55	0.0	53.000004	46
TAGTCGA	55	0.0	53.000004	28
AGCGTTG	15	0.0066964976	53.0	32
AACCGTT	40	1.6007107E-9	53.0	40
AACGTAA	85	0.0	53.0	27
TACCCTA	20	3.138425E-4	53.0	33
TCGTTAC	70	0.0	53.0	46
CAAACGA	15	0.0066964976	53.0	40
ACACGGT	20	3.138425E-4	53.0	43
TCCGCTA	20	3.138425E-4	53.0	50