##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527984_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1820232 Sequences flagged as poor quality 0 Sequence length 52 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.390222784787873 31.0 31.0 33.0 30.0 34.0 2 32.11483261474361 33.0 31.0 34.0 30.0 34.0 3 32.33282295883162 34.0 31.0 34.0 30.0 34.0 4 35.945093812217344 37.0 35.0 37.0 35.0 37.0 5 35.674733770200724 37.0 35.0 37.0 33.0 37.0 6 35.95068320961284 37.0 35.0 37.0 35.0 37.0 7 34.91151292802236 35.0 35.0 37.0 33.0 37.0 8 35.64581932413011 36.0 35.0 37.0 35.0 37.0 9 38.1367215827433 39.0 39.0 39.0 36.0 39.0 10 37.64318174826066 39.0 37.0 39.0 35.0 39.0 11 37.91300284798861 39.0 37.0 39.0 35.0 39.0 12 38.005590496156536 39.0 38.0 39.0 35.0 39.0 13 38.05073858716911 39.0 38.0 39.0 37.0 39.0 14 38.6896038526957 40.0 39.0 40.0 36.0 40.0 15 38.17130783328719 40.0 38.0 40.0 34.0 40.0 16 37.62386003542406 40.0 37.0 40.0 33.0 40.0 17 37.59597293092309 40.0 37.0 40.0 33.0 40.0 18 37.57702644498064 40.0 37.0 40.0 33.0 40.0 19 37.750743861222084 40.0 37.0 40.0 33.0 40.0 20 37.75434614928207 40.0 37.0 40.0 33.0 40.0 21 37.56401107111621 40.0 37.0 40.0 33.0 40.0 22 37.63709021707123 40.0 37.0 40.0 33.0 40.0 23 37.5631122845879 40.0 37.0 40.0 33.0 40.0 24 37.58376789332349 40.0 37.0 40.0 33.0 40.0 25 37.694394450817256 40.0 37.0 40.0 33.0 40.0 26 37.663890646906545 40.0 37.0 40.0 33.0 40.0 27 37.6427114785368 40.0 37.0 40.0 33.0 40.0 28 37.61004531290517 40.0 37.0 40.0 33.0 40.0 29 37.58059686897055 40.0 37.0 40.0 33.0 40.0 30 37.5169731111199 40.0 36.0 40.0 33.0 40.0 31 37.46710748959473 40.0 36.0 40.0 33.0 40.0 32 37.41025209973234 40.0 36.0 40.0 33.0 40.0 33 37.331112737277444 40.0 36.0 40.0 33.0 40.0 34 37.23490577025346 40.0 36.0 40.0 33.0 40.0 35 37.157710665453635 40.0 35.0 40.0 33.0 40.0 36 37.04735550193602 40.0 35.0 40.0 33.0 40.0 37 36.92018709702939 40.0 35.0 40.0 32.0 40.0 38 36.71166862246131 39.0 35.0 40.0 31.0 40.0 39 36.56176135789284 39.0 35.0 40.0 31.0 40.0 40 36.397553718427105 39.0 35.0 40.0 31.0 40.0 41 36.21671742942658 39.0 35.0 40.0 31.0 40.0 42 36.01920854044979 39.0 35.0 40.0 30.0 40.0 43 35.82031850884942 38.0 35.0 40.0 30.0 40.0 44 35.66719572010601 38.0 35.0 40.0 29.0 40.0 45 35.463589256754084 38.0 35.0 40.0 29.0 40.0 46 35.299430512154494 38.0 35.0 40.0 28.0 40.0 47 35.13970636710046 37.0 35.0 40.0 28.0 40.0 48 34.969474770249064 37.0 34.0 40.0 27.0 40.0 49 34.808993029459984 37.0 34.0 40.0 27.0 40.0 50 34.637507746265314 37.0 34.0 40.0 26.0 40.0 51 34.44603435166506 36.0 34.0 40.0 26.0 40.0 52 33.83276197759407 35.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 3.0 15 10.0 16 46.0 17 151.0 18 310.0 19 651.0 20 1162.0 21 1834.0 22 3063.0 23 4467.0 24 6449.0 25 8973.0 26 12699.0 27 16977.0 28 22700.0 29 29118.0 30 36710.0 31 43492.0 32 51224.0 33 62486.0 34 90543.0 35 155108.0 36 156315.0 37 288254.0 38 589820.0 39 237666.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.12658386403491 17.67505460842354 31.674149229329007 16.524212298212536 2 32.07310936188354 19.49883311577865 30.873866627990274 17.554190894347535 3 20.715656026264785 23.4258600002637 36.89480242079032 18.963681552681198 4 18.97098831357761 22.285236167697303 34.80083857442348 23.942936944301604 5 0.0 100.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 0.0 0.0 100.0 0.0 8 0.0 0.0 100.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 100.0 0.0 0.0 11 99.34129275828576 0.5416342532160736 0.06889231702332449 0.04818067147484496 12 99.38672652716797 0.46032593647403186 0.08213238751983264 0.07081514883817008 13 97.82747473948376 1.261322732486848 0.31616848841246614 0.595034039616928 14 61.775092405803214 22.82209081040219 4.84668987249977 10.556126911294824 15 32.237758703286175 25.27512976367848 17.410967393167464 25.076144139867885 16 27.900839013927897 17.60561291088169 30.827334098071013 23.666213977119398 17 22.182117444369727 17.763889438269405 29.139692083206974 30.91430103415389 18 20.52342778283208 20.58622197609975 34.093621032923274 24.796729208144896 19 23.297195082824608 20.057003722602392 31.12833968417213 25.517461510400874 20 27.15615372106413 20.037830342505792 27.314869752866667 25.491146183563412 21 29.240887974719705 20.69401043383481 23.145840749970333 26.91926084147515 22 28.374020454535465 22.294960202875238 23.5515033248509 25.779516017738395 23 27.14895683627142 22.44790773923324 22.9852568244048 27.41787860009054 24 27.069571351344223 24.209331557735496 21.980879360433175 26.740217730487103 25 28.341332313683093 22.62799467320649 23.934146856005167 25.09652615710525 26 28.0619173819601 22.37929011246918 21.992581165477805 27.56621134009291 27 29.540849737835618 24.294595414210935 21.37304475473456 24.791510093218886 28 29.263192823771917 23.484643715746127 20.005636644120088 27.24652681636187 29 28.680739598029266 23.382019434885223 19.475044939326416 28.462196027759102 30 30.01403117844319 22.250240628667115 20.114963367307023 27.620764825582672 31 27.2582286214065 22.83214447389124 19.85796316073995 30.051663743962308 32 27.88342365149058 24.704762909343426 20.135675012855504 27.276138426310492 33 29.795377732069316 25.181735075528834 19.74468089781962 25.27820629458223 34 27.34003138061522 23.58556491699959 21.02962699260314 28.04477670978205 35 28.697275951636936 25.073507113378955 20.605230542040793 25.623986392943316 36 32.24940557027895 23.610946296955554 19.011477657793073 25.12817047497242 37 30.282568375899338 24.07517283511113 20.7209850172945 24.921273771695038 38 29.038496191694247 25.53223984634926 22.110258472546356 23.31900548941014 39 29.225175691889827 25.75759573504916 23.03437144276114 21.982857130299873 40 29.51189738450923 26.87371719648924 21.345301038548932 22.269084380452604 41 30.124017158252354 26.34367487221409 20.084033244113936 23.448274725419616 42 31.56982186886067 24.101268409741174 20.09760294292156 24.23130677847659 43 29.149745746696027 24.606094168215918 20.663135248693575 25.581024836394484 44 29.9731023298129 25.707492231759467 20.939583525616516 23.379821912811114 45 26.980187140979833 24.727891829173423 22.191731603443955 26.100189426402785 46 27.166317260656886 26.138536186595996 20.659564275323145 26.035582277423973 47 30.195876130075728 22.024115607241274 21.826942939141823 25.953065323541175 48 29.083600332265334 21.495666486469855 21.54258358275209 27.87814959851272 49 28.607946679324392 22.629697752813925 21.48830478752159 27.274050780340087 50 29.33252464521006 23.03777760197601 21.544890980929903 26.084806771884022 51 28.601299175050215 22.950920541996844 22.442743562359084 26.00503672059386 52 28.530703778419454 23.35257263909216 21.721352003480877 26.39537157900751 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.5 2 1.0 3 8.0 4 15.0 5 17.0 6 19.0 7 51.0 8 83.0 9 225.5 10 368.0 11 571.5 12 775.0 13 1071.5 14 1617.0 15 1866.0 16 2266.0 17 2666.0 18 3657.5 19 4649.0 20 6075.0 21 7501.0 22 9597.5 23 11694.0 24 14014.5 25 16335.0 26 17066.5 27 17798.0 28 18527.0 29 19256.0 30 19457.5 31 19659.0 32 21120.5 33 22582.0 34 23398.5 35 24215.0 36 28125.5 37 32036.0 38 35954.5 39 46261.0 40 52649.0 41 56493.5 42 60338.0 43 65011.5 44 69685.0 45 78346.5 46 87008.0 47 91418.0 48 95828.0 49 104766.0 50 113704.0 51 122383.0 52 131062.0 53 137960.5 54 144859.0 55 152699.0 56 160539.0 57 154767.0 58 148995.0 59 146466.0 60 143937.0 61 132709.0 62 121481.0 63 100779.0 64 73008.0 65 65939.0 66 56079.5 67 46220.0 68 37651.5 69 29083.0 70 24431.5 71 19780.0 72 16273.5 73 12767.0 74 10205.5 75 7644.0 76 5527.5 77 3411.0 78 2567.0 79 1723.0 80 1102.0 81 481.0 82 338.0 83 195.0 84 112.0 85 29.0 86 34.0 87 39.0 88 19.5 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1820232.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.907697248848443 #Duplication Level Percentage of deduplicated Percentage of total 1 79.18962600368906 8.637764656977764 2 6.674991907533384 1.4561758173177504 3 3.097080438581125 1.01346047338121 4 1.8198938259295718 0.7940340351315304 5 1.2330894212010068 0.6725083043609169 6 0.8269161499651361 0.5411850608401837 7 0.578642512053607 0.44181601357557165 8 0.41634627097747196 0.36331032596074236 9 0.31794743256989166 0.31212669019689293 >10 2.423893896476987 5.498508919891038 >50 0.7923640747631935 6.468317564319472 >100 2.4278197578850382 58.84802281701242 >500 0.18667732363177894 13.06445218230462 >1k 0.01471098474272171 1.8883171387298707 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.024667185281876156 0.0 0.0 0.0 0.0 11 0.02675483125227993 0.0 0.0 0.0 0.0 12 0.033292459422754904 0.0 0.0 0.0 0.0 13 0.04587327329703027 0.0 0.0 0.0 0.0 14 0.08696693608287295 0.0 0.0 0.0 0.0 15 0.13740006768367988 0.0 0.0 0.0 0.0 16 0.16673698737303816 0.0 0.0 0.0 0.0 17 0.1910196062919452 0.0 0.0 0.0 0.0 18 0.22249911000355999 0.0 0.0 0.0 0.0 19 0.2526051624188565 0.0 0.0 0.0 0.0 20 0.2797445600341055 0.0 0.0 0.0 0.0 21 0.3103450549160766 0.0 0.0 0.0 0.0 22 0.34259369135362966 0.0 0.0 0.0 0.0 23 0.3725898676652207 0.0 0.0 0.0 0.0 24 0.4034101147546027 0.0 0.0 0.0 0.0 25 0.4395044148218469 0.0 0.0 0.0 0.0 26 0.48499312175590803 0.0 0.0 0.0 0.0 27 0.5304818286899692 0.0 0.0 0.0 0.0 28 0.5777834913351705 0.0 0.0 0.0 0.0 29 0.6295351361804429 0.0 0.0 0.0 0.0 30 0.6926589577592307 0.0 0.0 0.0 0.0 31 0.7479815759749306 0.0 0.0 0.0 0.0 32 0.7926462121312009 0.0 0.0 0.0 0.0 33 0.8323664236207252 0.0 0.0 0.0 0.0 34 0.8649446883693946 0.0 0.0 0.0 0.0 35 0.8982371477921496 0.0 0.0 0.0 0.0 36 0.9252117312518404 0.0 0.0 0.0 0.0 37 0.9519665625041204 0.0 0.0 0.0 0.0 38 0.978391765445284 0.0 0.0 0.0 0.0 39 1.0098712691568987 0.0 0.0 0.0 0.0 40 1.0460754453278482 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAAGCG 105 0.0 46.000004 14 TCACGGT 50 1.6370905E-11 46.0 43 CTATGCG 20 6.312431E-4 46.0 18 TAATACG 30 1.8620067E-6 46.0 44 ACCGGTG 65 0.0 46.0 35 GCCCAAT 20 6.312431E-4 46.0 19 CGTATTC 25 3.417947E-5 46.0 31 GATCGTT 30 1.8620067E-6 46.0 28 GTATTCG 20 6.312431E-4 46.0 44 TACTTGA 20 6.312431E-4 46.0 40 CACGGTA 20 6.312431E-4 46.0 25 CGAAAAC 40 5.6152203E-9 46.0 19 GCGAACT 85 0.0 46.0 45 CTATAGC 30 1.8620067E-6 46.0 28 CGGTTCA 40 5.6152203E-9 46.0 45 GACGTAG 20 6.312431E-4 46.0 19 ATTACAT 25 3.417947E-5 46.0 33 TCTTACG 20 6.312431E-4 46.0 17 ACCGATT 30 1.8620067E-6 46.0 41 ACCGATG 25 3.417947E-5 46.0 35 >>END_MODULE