Basic Statistics
Measure | Value |
---|---|
Filename | SRR1527983_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1806831 |
Sequences flagged as poor quality | 0 |
Sequence length | 52 |
%GC | 52 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AACCGTT | 40 | 5.6152203E-9 | 46.000004 | 40 |
CTAGACG | 20 | 6.312417E-4 | 46.000004 | 39 |
CAAACCG | 35 | 1.0199983E-7 | 46.000004 | 38 |
CGAACGC | 20 | 6.312417E-4 | 46.000004 | 36 |
TTTACGT | 40 | 5.6152203E-9 | 46.000004 | 41 |
TATGGTA | 80 | 0.0 | 46.000004 | 26 |
TAGCGAC | 145 | 0.0 | 46.000004 | 34 |
CGACCTT | 20 | 6.312417E-4 | 46.000004 | 38 |
CGACCGA | 20 | 6.312417E-4 | 46.000004 | 36 |
CGATTTA | 20 | 6.312417E-4 | 46.000004 | 17 |
ATAGACC | 35 | 1.0199983E-7 | 46.000004 | 15 |
TTATCGC | 35 | 1.0199983E-7 | 46.000004 | 25 |
CGTTCAC | 20 | 6.312417E-4 | 46.000004 | 35 |
CCATGCG | 35 | 1.0199983E-7 | 46.000004 | 42 |
ACGATTT | 40 | 5.6152203E-9 | 46.000004 | 35 |
GTTACCG | 20 | 6.312417E-4 | 46.000004 | 46 |
ACGATAG | 40 | 5.6152203E-9 | 46.000004 | 30 |
TACGATT | 40 | 5.6152203E-9 | 46.000004 | 34 |
CGCTATA | 20 | 6.312417E-4 | 46.000004 | 26 |
TACGACA | 20 | 6.312417E-4 | 46.000004 | 46 |