##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527983_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1806831 Sequences flagged as poor quality 0 Sequence length 52 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.34339182801269 31.0 31.0 33.0 30.0 34.0 2 31.956966644915877 33.0 31.0 34.0 30.0 34.0 3 32.25927328012415 33.0 31.0 34.0 30.0 34.0 4 35.91267639308823 37.0 35.0 37.0 35.0 37.0 5 35.65383536146989 37.0 35.0 37.0 33.0 37.0 6 35.944532167092554 37.0 35.0 37.0 35.0 37.0 7 34.86898497977951 35.0 35.0 37.0 33.0 37.0 8 35.569329948401375 36.0 35.0 37.0 35.0 37.0 9 38.12264345696969 39.0 39.0 39.0 35.0 39.0 10 37.63224950202869 39.0 37.0 39.0 35.0 39.0 11 37.898425475321154 39.0 37.0 39.0 35.0 39.0 12 37.96776344882283 39.0 37.0 39.0 35.0 39.0 13 38.05843158546649 39.0 38.0 39.0 37.0 39.0 14 38.712497737751896 40.0 39.0 40.0 36.0 40.0 15 38.193229471931794 40.0 38.0 40.0 34.0 40.0 16 37.652424604182684 40.0 37.0 40.0 33.0 40.0 17 37.635404196629345 40.0 37.0 40.0 33.0 40.0 18 37.64505922247294 40.0 37.0 40.0 33.0 40.0 19 37.80824437924742 40.0 37.0 40.0 33.0 40.0 20 37.79249083063109 40.0 37.0 40.0 33.0 40.0 21 37.787736650522376 40.0 37.0 40.0 33.0 40.0 22 37.753977544109 40.0 37.0 40.0 33.0 40.0 23 37.65096126865213 40.0 37.0 40.0 33.0 40.0 24 37.66988390170415 40.0 37.0 40.0 33.0 40.0 25 37.60754215529842 40.0 37.0 40.0 33.0 40.0 26 37.611827005403384 40.0 37.0 40.0 33.0 40.0 27 37.611759483869825 40.0 37.0 40.0 33.0 40.0 28 37.42694529814908 40.0 37.0 40.0 33.0 40.0 29 37.50198773432601 40.0 37.0 40.0 33.0 40.0 30 37.50151840432226 40.0 36.0 40.0 33.0 40.0 31 37.49115274201073 40.0 36.0 40.0 33.0 40.0 32 37.433219819673226 40.0 36.0 40.0 33.0 40.0 33 37.34574511949374 40.0 36.0 40.0 33.0 40.0 34 37.27345556944728 40.0 36.0 40.0 33.0 40.0 35 37.129926927310855 40.0 35.0 40.0 33.0 40.0 36 36.651870042079196 40.0 35.0 40.0 31.0 40.0 37 36.74162497765425 39.0 35.0 40.0 31.0 40.0 38 36.640306149274615 39.0 35.0 40.0 31.0 40.0 39 36.53078898911962 39.0 35.0 40.0 31.0 40.0 40 36.375794969202985 39.0 35.0 40.0 31.0 40.0 41 36.22617887339768 39.0 35.0 40.0 31.0 40.0 42 35.8898900893332 39.0 35.0 40.0 30.0 40.0 43 35.69340685432118 38.0 35.0 40.0 29.0 40.0 44 35.55279768832835 38.0 35.0 40.0 29.0 40.0 45 35.1174869149356 38.0 35.0 40.0 27.0 40.0 46 35.10613333510439 38.0 35.0 40.0 27.0 40.0 47 35.02423912363691 37.0 34.0 40.0 27.0 40.0 48 34.85182288769675 37.0 34.0 40.0 26.0 40.0 49 34.701212786364636 37.0 34.0 40.0 26.0 40.0 50 34.466344666435326 37.0 34.0 40.0 25.0 40.0 51 34.364921788479386 36.0 34.0 40.0 25.0 40.0 52 33.881774222381615 35.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 3.0 15 8.0 16 40.0 17 120.0 18 354.0 19 631.0 20 1098.0 21 1941.0 22 2919.0 23 4573.0 24 6344.0 25 9386.0 26 12983.0 27 17526.0 28 22646.0 29 29394.0 30 36592.0 31 44437.0 32 51519.0 33 64063.0 34 92662.0 35 155045.0 36 157947.0 37 290711.0 38 570609.0 39 233279.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.18476880239491 17.676030575078688 31.579821245041735 16.559379377484667 2 32.173235903081135 19.542890286916705 30.782070929710635 17.501802880291518 3 20.740179906145066 23.35697140463054 36.986248298817095 18.916600390407293 4 18.997183466522323 22.301034241719343 34.82683217190761 23.87495011985072 5 0.0 100.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 0.0 0.0 100.0 0.0 8 0.0 0.0 100.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 100.0 0.0 0.0 11 99.32146393326215 0.5574400704880534 0.0740523048364789 0.04704369141330872 12 99.38450247975598 0.4585929730007953 0.08644970116186848 0.07045484608134352 13 97.8189437750404 1.2565646704091307 0.32454612523252035 0.5999454293179606 14 61.76178070887648 22.8098256007341 4.890440777250335 10.537952913139081 15 32.28979356674753 25.227151847627145 17.4473428892907 25.035711696334634 16 27.899012137825842 17.59378713338436 30.831881897089435 23.675318831700366 17 22.179606172353694 17.750359607511715 29.14495046852749 30.925083751607097 18 20.466828386274088 20.642329028005385 34.11398188319771 24.776860702522814 19 23.24600363841444 20.06867272035957 31.200372364653916 25.484951276572076 20 27.179575732318074 20.083837392650448 27.270287038466794 25.466299836564684 21 28.885656710561197 20.803273798158212 23.195251797207376 27.115817694073215 22 28.335300866544795 22.312656800774395 23.569000089106286 25.78304224357452 23 27.067113637080613 22.461646938756306 23.020747374823657 27.450492049339424 24 27.012044845367388 24.235968942308382 21.95479267291739 26.797193539406837 25 28.355059216938383 22.691330843891873 23.93228807785565 25.02132186131409 26 28.000792547836518 22.373813599611697 22.005710550682384 27.619683301869408 27 29.533254632004873 24.275596334134182 21.3784797803447 24.81266925351624 28 29.420349772612937 23.45703610354261 20.01399134728151 27.108622776562946 29 28.659127500026287 23.411818814266525 19.47542409887809 28.453629586829095 30 30.01215941059236 22.26478292657144 20.10752527491503 27.61553238792117 31 27.300616383048553 22.85260768716056 19.886475270791788 29.9603006589991 32 27.91395542803948 24.653384848942707 20.18130085215496 27.251358870862852 33 29.77649818937134 25.172802547664947 19.788845774729346 25.26185348823437 34 27.30083776512579 23.64731399892962 21.056590240039053 27.995257995905536 35 28.728641472279364 25.058901468925427 20.614656268350497 25.59780079044471 36 32.386426843462395 23.441816085732423 19.0870645898814 25.08469248092378 37 30.264867051760792 24.06002553642261 20.736139683235454 24.938967728581147 38 29.039517254242377 25.51356491005523 22.132341098863147 23.31457673683925 39 29.241362363165123 25.68347565433624 23.028495747527025 22.046666234971614 40 29.519030833542264 26.92609325387931 21.349700110303623 22.205175802274812 41 30.16430424317493 26.294766915112707 20.150971507573203 23.389957334139165 42 31.70086189577221 24.032076049171174 20.15423689321248 24.112825161844135 43 29.10952933616924 24.595770163341232 20.711344890584677 25.583355609904856 44 30.12152215674847 25.653644419428268 20.88269461836774 23.342138805455516 45 27.027818318370674 24.72206863840614 22.206282712661007 26.043830330562184 46 27.145593583461874 26.170737606339493 20.67160680772026 26.01206200247837 47 30.177697858847896 21.96979130865034 21.853897791215672 25.998613041286095 48 29.1376448599786 21.483691612552587 21.570805459946172 27.807858067522638 49 28.639590531709942 22.571618485624832 21.530845995004512 27.257944987660714 50 29.330800722369716 23.014382640103033 21.601743605240333 26.053073032286918 51 28.74225647002957 22.880778556489233 22.41189131689682 25.965073656584376 52 28.501392769993426 23.396820178533577 21.665667680043125 26.436119371429868 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 7.0 4 14.0 5 18.5 6 23.0 7 49.0 8 75.0 9 239.0 10 403.0 11 590.0 12 777.0 13 1042.0 14 1583.5 15 1860.0 16 2260.0 17 2660.0 18 3560.0 19 4460.0 20 5991.0 21 7522.0 22 9536.5 23 11551.0 24 13859.0 25 16167.0 26 16799.5 27 17432.0 28 18143.0 29 18854.0 30 19013.5 31 19173.0 32 20895.5 33 22618.0 34 23601.5 35 24585.0 36 28207.5 37 31830.0 38 35510.0 39 45730.0 40 52270.0 41 56364.0 42 60458.0 43 65042.0 44 69626.0 45 77842.0 46 86058.0 47 90929.5 48 95801.0 49 104380.5 50 112960.0 51 121432.5 52 129905.0 53 137187.5 54 144470.0 55 151731.0 56 158992.0 57 153572.5 58 148153.0 59 145475.0 60 142797.0 61 131314.0 62 119831.0 63 99970.5 64 72678.5 65 65247.0 66 55507.0 67 45767.0 68 37164.5 69 28562.0 70 24076.5 71 19591.0 72 16027.0 73 12463.0 74 10005.5 75 7548.0 76 5402.0 77 3256.0 78 2494.0 79 1732.0 80 1096.5 81 461.0 82 345.0 83 229.0 84 126.0 85 23.0 86 21.5 87 20.0 88 10.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1806831.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.15235234046724 #Duplication Level Percentage of deduplicated Percentage of total 1 79.55890099757808 9.668277967429193 2 7.124316981007202 1.7315442027674675 3 3.1146226363975016 1.1354997505529227 4 1.788329308209018 0.8692963141656008 5 1.1429618623015594 0.6944837631202575 6 0.7734259408157916 0.5639366725230518 7 0.5218164052607249 0.44389077696350604 8 0.40318103493537527 0.391967839482313 9 0.2763672657705613 0.3022661150113871 >10 2.176100333228613 5.527387595708625 >50 0.7459083582102815 6.795160416853201 >100 2.2166409815879087 58.96717485417473 >500 0.14712011587795462 11.459470398895476 >1k 0.010307778819474527 1.4496433323522515 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.027506723096958154 0.0 0.0 0.0 0.0 11 0.029277779714870954 0.0 0.0 0.0 0.0 12 0.03636200618652215 0.0 0.0 0.0 0.0 13 0.048814748031221517 0.0 0.0 0.0 0.0 14 0.09037923303286251 0.0 0.0 0.0 0.0 15 0.13864052587098627 0.0 0.0 0.0 0.0 16 0.16636863104518354 0.0 0.0 0.0 0.0 17 0.19027789538700632 0.0 0.0 0.0 0.0 18 0.22271036970253444 0.0 0.0 0.0 0.0 19 0.2537038605160084 0.0 0.0 0.0 0.0 20 0.2805464373812493 0.0 0.0 0.0 0.0 21 0.30860661567130515 0.0 0.0 0.0 0.0 22 0.34020890719718666 0.0 0.0 0.0 0.0 23 0.37230930839685616 0.0 0.0 0.0 0.0 24 0.4031367626524008 0.0 0.0 0.0 0.0 25 0.4380597853368688 0.0 0.0 0.0 0.0 26 0.4802884165702271 0.0 0.0 0.0 0.0 27 0.5262805431166501 0.0 0.0 0.0 0.0 28 0.5711657592768776 0.0 0.0 0.0 0.0 29 0.623190547428066 0.0 0.0 0.0 0.0 30 0.6834618179564109 0.0 0.0 0.0 0.0 31 0.7391394103820446 0.0 0.0 0.0 0.0 32 0.7846334272546795 0.0 0.0 0.0 0.0 33 0.8218809617501581 0.0 0.0 0.0 0.0 34 0.8542580905463765 0.0 0.0 0.0 0.0 35 0.8850855448019211 0.0 0.0 0.0 0.0 36 0.9111532843968252 0.0 0.0 0.0 0.0 37 0.9396008813220494 0.0 0.0 0.0 0.0 38 0.9663327671486708 0.0 0.0 0.0 0.0 39 0.9952231282283733 0.0 0.0 0.0 0.0 40 1.0281537122176894 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGTT 40 5.6152203E-9 46.000004 40 CTAGACG 20 6.312417E-4 46.000004 39 CAAACCG 35 1.0199983E-7 46.000004 38 CGAACGC 20 6.312417E-4 46.000004 36 TTTACGT 40 5.6152203E-9 46.000004 41 TATGGTA 80 0.0 46.000004 26 TAGCGAC 145 0.0 46.000004 34 CGACCTT 20 6.312417E-4 46.000004 38 CGACCGA 20 6.312417E-4 46.000004 36 CGATTTA 20 6.312417E-4 46.000004 17 ATAGACC 35 1.0199983E-7 46.000004 15 TTATCGC 35 1.0199983E-7 46.000004 25 CGTTCAC 20 6.312417E-4 46.000004 35 CCATGCG 35 1.0199983E-7 46.000004 42 ACGATTT 40 5.6152203E-9 46.000004 35 GTTACCG 20 6.312417E-4 46.000004 46 ACGATAG 40 5.6152203E-9 46.000004 30 TACGATT 40 5.6152203E-9 46.000004 34 CGCTATA 20 6.312417E-4 46.000004 26 TACGACA 20 6.312417E-4 46.000004 46 >>END_MODULE