##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527982_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1803764 Sequences flagged as poor quality 0 Sequence length 59 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.018639356368126 31.0 31.0 33.0 30.0 33.0 2 31.624702012014875 31.0 31.0 34.0 30.0 34.0 3 31.972276306656525 31.0 31.0 34.0 30.0 34.0 4 35.7372949011068 37.0 35.0 37.0 35.0 37.0 5 35.20894972956551 37.0 35.0 37.0 33.0 37.0 6 35.61706243167066 37.0 35.0 37.0 33.0 37.0 7 34.28281859489379 35.0 35.0 36.0 32.0 37.0 8 35.2575347994527 35.0 35.0 37.0 33.0 37.0 9 37.86266717818961 39.0 37.0 39.0 35.0 39.0 10 37.20984507951151 39.0 37.0 39.0 33.0 39.0 11 37.35046491669642 39.0 37.0 39.0 35.0 39.0 12 37.638388946669295 39.0 37.0 39.0 35.0 39.0 13 37.69038299910631 39.0 37.0 39.0 35.0 39.0 14 38.08811075063035 40.0 38.0 40.0 34.0 40.0 15 37.52357902696805 40.0 37.0 40.0 32.0 40.0 16 36.97879101700666 39.0 36.0 40.0 32.0 40.0 17 36.88676345686021 39.0 36.0 40.0 32.0 40.0 18 36.79492051066548 39.0 36.0 40.0 31.0 40.0 19 37.07158918794255 39.0 36.0 40.0 32.0 40.0 20 37.166940353616106 39.0 36.0 40.0 32.0 40.0 21 37.147885754455686 39.0 36.0 40.0 32.0 40.0 22 37.12810489620593 39.0 36.0 40.0 32.0 40.0 23 37.05453817683466 39.0 36.0 40.0 32.0 40.0 24 37.050840908234115 39.0 36.0 40.0 32.0 40.0 25 36.964515313533255 39.0 36.0 40.0 31.0 40.0 26 36.79325011476002 39.0 35.0 40.0 31.0 40.0 27 36.675761906768294 39.0 35.0 40.0 31.0 40.0 28 36.6598618222783 39.0 35.0 40.0 31.0 40.0 29 36.580324255279514 39.0 35.0 40.0 30.0 40.0 30 36.522809524971116 39.0 35.0 40.0 30.0 40.0 31 36.499705061194256 39.0 35.0 40.0 30.0 40.0 32 36.37712527802972 39.0 35.0 40.0 30.0 40.0 33 36.228548191448546 39.0 35.0 40.0 30.0 40.0 34 36.1415905850211 38.0 35.0 40.0 30.0 40.0 35 36.02775695711856 38.0 35.0 40.0 30.0 40.0 36 35.81793737983461 38.0 35.0 40.0 29.0 40.0 37 35.6679715306437 38.0 35.0 40.0 29.0 40.0 38 35.43527146566846 38.0 34.0 40.0 27.0 40.0 39 35.25072126952306 38.0 34.0 40.0 27.0 40.0 40 35.045111222975954 38.0 34.0 40.0 26.0 40.0 41 34.86895624926542 38.0 34.0 40.0 26.0 40.0 42 34.70341851816535 37.0 33.0 40.0 25.0 40.0 43 34.46978540429901 37.0 33.0 40.0 24.0 40.0 44 34.329239301815534 37.0 33.0 40.0 24.0 40.0 45 34.07789988047217 37.0 33.0 40.0 23.0 40.0 46 33.85023317906334 36.0 33.0 40.0 23.0 40.0 47 33.731866807409396 36.0 33.0 40.0 23.0 40.0 48 33.531984782931694 36.0 33.0 39.0 22.0 40.0 49 33.387891098835546 36.0 32.0 39.0 22.0 40.0 50 33.16137587844086 35.0 32.0 39.0 20.0 40.0 51 32.967752433245145 35.0 32.0 39.0 20.0 40.0 52 32.807722628902674 35.0 32.0 39.0 20.0 40.0 53 32.52384181079121 35.0 31.0 38.0 20.0 40.0 54 32.36029436223364 35.0 31.0 38.0 20.0 40.0 55 32.17321002082312 35.0 31.0 38.0 18.0 40.0 56 31.966816612372792 35.0 31.0 38.0 18.0 40.0 57 31.79095879505301 35.0 31.0 37.0 18.0 40.0 58 31.561309018252942 35.0 30.0 37.0 17.0 40.0 59 31.07103756367241 34.0 29.0 36.0 15.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 3.0 14 12.0 15 70.0 16 266.0 17 645.0 18 1320.0 19 2445.0 20 3979.0 21 6246.0 22 8810.0 23 12511.0 24 16453.0 25 21557.0 26 27465.0 27 33841.0 28 39634.0 29 44166.0 30 50413.0 31 59579.0 32 73428.0 33 92038.0 34 129043.0 35 169089.0 36 203514.0 37 305675.0 38 422921.0 39 78640.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.05101776063831 17.964600690555972 31.28358255292821 16.70079899587751 2 31.309029340867212 19.981771451254154 30.825928447402212 17.883270760476424 3 20.7601992278369 23.52480701466489 36.97667765849634 18.738316099001864 4 19.095790801900915 22.614821007626272 34.306982509907066 23.982405680565748 5 0.0 100.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 0.0 0.0 100.0 0.0 8 0.0 0.0 100.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 100.0 0.0 0.0 11 99.28937488496278 0.5840564508439019 0.07412277881141878 0.0524458853819014 12 99.37175816791998 0.468076755052213 0.08332575658456429 0.0768393204432509 13 97.77897773766414 1.2899137581191331 0.32620675432040996 0.604901749896328 14 61.41967574472048 23.05523338973391 4.924092065259091 10.600998800286513 15 32.253554234367684 25.477446051700774 17.453225588269863 24.815774125661672 16 28.015028573582796 17.70070807489228 30.535646570172155 23.748616781352773 17 22.111096573609405 17.964212613179996 29.103419294320098 30.821271518890498 18 20.291235438782458 20.728543201882285 34.050241605886356 24.9299797534489 19 23.194442288459022 20.162504629208698 31.152745037599157 25.490308044733123 20 27.1170175255743 20.230806247380478 27.333786459869476 25.318389767175752 21 28.87611683124843 20.897966696308387 23.250824387225823 26.975092085217355 22 28.290009114274373 22.46735160475539 23.53844516244919 25.704194118521052 23 27.087135567624145 22.593310433072176 23.085946942061156 27.23360705724252 24 27.025985661095355 24.406297054381838 21.942227475434702 26.625489809088105 25 28.314236230460306 22.777758065911062 23.88145012318685 25.02655558044179 26 27.997398772788458 22.50366455922172 22.046897487697947 27.452039180291877 27 29.399799530315494 24.37192448679539 21.518724178994592 24.709551803894524 28 29.284540549650618 23.614896405516465 19.99967845017419 27.100884594658726 29 28.55922393395145 23.48189674480697 19.550506607294523 28.408372713947056 30 29.86538150223643 22.48387261304694 20.229143058626295 27.42160282609033 31 27.199456248156633 23.015926695510057 19.91524390108684 29.869373155246475 32 27.809513883190927 24.878365462444087 20.15080686830428 27.161313786060703 33 29.68891717541763 25.35830629727614 19.769382247344996 25.183394279961234 34 27.25201301278881 23.787424518950374 21.03961493853963 27.920947529721186 35 28.61566147234339 25.264336132664805 20.678204022255684 25.441798372736123 36 32.21812831390359 23.71773691015011 19.100170532286928 24.96396424365937 37 30.11308574735941 24.248959398236135 20.767350939479886 24.87060391492457 38 28.88737107515174 25.800160109637403 22.103612224215585 23.208856590995275 39 29.043211861418676 25.94458033312562 23.083951115556136 21.928256689899566 40 29.368919659112834 27.16491736169477 21.365489055109204 22.100673924083196 41 30.059974586475835 26.520764357199724 20.165054851965113 23.254206204359328 42 31.42750381979017 24.310996338767154 20.12929629375018 24.13220354769249 43 28.941480149287823 24.88984146484795 20.70708806695333 25.461590318910897 44 29.76403786748156 25.938371095110003 21.05718929970883 23.24040173769961 45 26.791586926005838 24.981095087827455 22.19542024344648 26.031897742720222 46 26.89387303438809 26.42651699446269 20.655806413699356 26.023803557449867 47 29.924646461510484 22.24132425306193 21.87414761576348 25.959881669664103 48 28.924238425869458 21.656657966341495 21.520221048873356 27.898882558915687 49 28.458379255822823 22.86258069237439 21.50902224459519 27.170017807207596 50 29.109462213460297 23.293790096708882 21.599998669448997 25.996749020381827 51 28.502287438933255 23.179529029296518 22.37271616464238 25.94546736712785 52 28.288734002896167 23.606691340995827 21.65111400382755 26.45346065228045 53 27.3231420518427 25.338181713350526 21.740593558802594 25.59808267600418 54 26.276774566961087 23.948753828106113 22.96996724626947 26.80450435866333 55 25.473066321314764 24.72845671606707 23.055566027484748 26.742910935133423 56 27.406301489551847 24.290927194466683 22.478716727908974 25.8240545880725 57 27.792826556023957 23.125198196659873 22.762234970872022 26.319740276444147 58 26.85528705529105 23.41287441150838 22.999294807968226 26.73254372523235 59 26.246227333509264 23.828616160428968 22.30485806347172 27.62029844259005 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 3.0 4 12.0 5 18.0 6 36.0 7 54.0 8 170.5 9 402.5 10 518.0 11 718.0 12 918.0 13 939.5 14 1018.5 15 1076.0 16 1300.0 17 1524.0 18 1875.0 19 3016.5 20 3807.0 21 4975.0 22 6143.0 23 8095.5 24 10048.0 25 11413.0 26 13855.5 27 14933.0 28 16363.5 29 17794.0 30 18533.5 31 20502.5 32 21732.0 33 24530.0 34 27328.0 35 27835.5 36 29833.5 37 31324.0 38 35232.0 39 39140.0 40 44944.0 41 50748.0 42 52687.0 43 60051.0 44 65476.0 45 64115.5 46 62755.0 47 69617.5 48 81559.0 49 86638.0 50 95322.5 51 104007.0 52 108383.0 53 125711.5 54 138664.0 55 142494.5 56 146325.0 57 141592.0 58 131698.0 59 126537.0 60 113318.0 61 100099.0 62 89077.5 63 78056.0 64 71099.5 65 55065.0 66 45987.0 67 41917.5 68 37848.0 69 34783.0 70 24724.0 71 17730.0 72 15539.5 73 13349.0 74 9137.5 75 4719.5 76 4513.0 77 3048.5 78 1584.0 79 1151.0 80 718.0 81 702.5 82 429.5 83 172.0 84 140.5 85 109.0 86 61.5 87 10.0 88 6.0 89 3.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 1803764.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.106320967859215 #Duplication Level Percentage of deduplicated Percentage of total 1 84.4392241407098 13.600052462872783 2 5.827731946887706 1.8772664250244093 3 2.3488705042265807 1.1349498675903187 4 1.3183106631347372 0.8493253870319761 5 0.842391079074592 0.6783910550018327 6 0.5524980489999635 0.5339226546785653 7 0.3885425969199999 0.4380594242975347 8 0.2630675567323768 0.338964040396974 9 0.23517811129643543 0.3409068730639776 >10 1.5151333240007603 5.208238105127956 >50 0.5465347627182949 6.5648845870272 >100 1.614039443135968 56.451897691783 >500 0.10122293596721717 10.586567024040983 >1k 0.007254886195602596 1.396574402062465 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.02528046906358038 0.0 0.0 0.0 0.0 11 0.027220855943460454 0.0 0.0 0.0 0.0 12 0.03287569770768238 0.0 0.0 0.0 0.0 13 0.046125768116006306 0.0 0.0 0.0 0.0 14 0.08382471321081915 0.0 0.0 0.0 0.0 15 0.12906344732459457 0.0 0.0 0.0 0.0 16 0.15218177100773717 0.0 0.0 0.0 0.0 17 0.1739695436875334 0.0 0.0 0.0 0.0 18 0.205071173390754 0.0 0.0 0.0 0.0 19 0.23223658970907501 0.0 0.0 0.0 0.0 20 0.2589584890262806 0.0 0.0 0.0 0.0 21 0.2847933543412553 0.0 0.0 0.0 0.0 22 0.3140654764148747 0.0 0.0 0.0 0.0 23 0.3405101776063831 0.0 0.0 0.0 0.0 24 0.37083565255765166 0.0 0.0 0.0 0.0 25 0.40692684852342104 0.0 0.0 0.0 0.0 26 0.44822936925229684 0.0 0.0 0.0 0.0 27 0.48820133897782636 0.0 0.0 0.0 0.0 28 0.5280069898279376 0.0 0.0 0.0 0.0 29 0.5757405070729874 0.0 0.0 0.0 0.0 30 0.6311801322124181 0.0 0.0 0.0 0.0 31 0.6814638722138816 0.0 0.0 0.0 0.0 32 0.7228772721930363 0.0 0.0 0.0 0.0 33 0.7581368737817142 0.0 0.0 0.0 0.0 34 0.7885177883581223 0.0 0.0 0.0 0.0 35 0.8147961706742124 0.0 0.0 0.0 0.0 36 0.8402429586132111 0.0 0.0 0.0 0.0 37 0.8645809540494211 0.0 0.0 0.0 0.0 38 0.8898614231130014 0.0 0.0 0.0 0.0 39 0.9180801923089716 0.0 0.0 0.0 0.0 40 0.9499579767641443 0.0 0.0 0.0 0.0 41 0.9802834517154129 0.0 0.0 0.0 0.0 42 1.004233369775647 0.0 0.0 0.0 0.0 43 1.0288485633375541 0.0 0.0 0.0 0.0 44 1.053020239898346 0.0 0.0 0.0 0.0 45 1.0768038390831616 0.0 0.0 0.0 0.0 46 1.1023060666472997 0.0 0.0 0.0 0.0 47 1.1257015884561394 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACGGTA 20 3.1387238E-4 53.000004 25 TTTACGT 40 1.6025297E-9 53.000004 41 TAAACCG 20 3.1387238E-4 53.000004 43 TCGATAT 80 0.0 53.000004 52 CGTTATT 20 3.1387238E-4 53.000004 43 TACGATT 40 1.6025297E-9 53.000004 34 CGAGCAT 20 3.1387238E-4 53.000004 36 ACGTCTA 20 3.1387238E-4 53.000004 47 CCGACTA 20 3.1387238E-4 53.000004 34 CGATGTA 20 3.1387238E-4 53.000004 35 TGCTACG 130 0.0 53.000004 32 CAATGCG 40 1.6025297E-9 53.000004 15 ATACGTC 20 3.1387238E-4 53.000004 46 AACTATC 20 3.1387238E-4 53.000004 31 TATACGA 65 0.0 53.000004 33 TGTCGAT 20 3.1387238E-4 53.000004 40 CGATACC 20 3.1387238E-4 53.000004 34 AATACGT 20 3.1387238E-4 53.000004 45 TACGTTC 40 1.6025297E-9 53.000004 43 TACGTCT 20 3.1387238E-4 53.000004 47 >>END_MODULE