##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527979_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4381137 Sequences flagged as poor quality 0 Sequence length 59 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.449052608946033 31.0 31.0 34.0 30.0 34.0 2 31.975820660253262 33.0 31.0 34.0 30.0 34.0 3 32.19287641541454 34.0 31.0 34.0 30.0 34.0 4 35.92689705891416 37.0 35.0 37.0 35.0 37.0 5 35.78111344155638 37.0 35.0 37.0 35.0 37.0 6 35.764514554098625 37.0 35.0 37.0 33.0 37.0 7 36.030676968102114 37.0 35.0 37.0 35.0 37.0 8 35.99933396285028 37.0 35.0 37.0 35.0 37.0 9 37.49449332444979 39.0 37.0 39.0 35.0 39.0 10 37.39161295344108 39.0 37.0 39.0 34.0 39.0 11 37.480248848643626 39.0 37.0 39.0 35.0 39.0 12 37.53921482026241 39.0 37.0 39.0 35.0 39.0 13 37.62733007436198 39.0 37.0 39.0 35.0 39.0 14 38.06253331041691 40.0 38.0 40.0 34.0 40.0 15 37.55039228401212 40.0 37.0 40.0 32.0 40.0 16 36.89010866357295 39.0 36.0 40.0 31.0 40.0 17 36.78670171692873 39.0 36.0 40.0 31.0 40.0 18 36.77983340854212 39.0 36.0 40.0 31.0 40.0 19 36.892498454168404 39.0 35.0 40.0 31.0 40.0 20 36.968160548277766 39.0 35.0 40.0 31.0 40.0 21 36.933115535989856 39.0 35.0 40.0 31.0 40.0 22 36.8780024454839 39.0 35.0 40.0 31.0 40.0 23 36.81516419139598 39.0 35.0 40.0 31.0 40.0 24 36.76891432520827 39.0 35.0 40.0 31.0 40.0 25 36.678773341258214 39.0 35.0 40.0 30.0 40.0 26 36.47899985779947 39.0 35.0 40.0 30.0 40.0 27 36.355720444259106 39.0 35.0 40.0 30.0 40.0 28 36.328918725892386 39.0 35.0 40.0 30.0 40.0 29 36.26940198400552 39.0 35.0 40.0 30.0 40.0 30 36.204630898326165 39.0 35.0 40.0 30.0 40.0 31 36.17116150442225 38.0 35.0 40.0 30.0 40.0 32 36.00739328626336 38.0 35.0 40.0 30.0 40.0 33 35.813099658832854 38.0 35.0 40.0 29.0 40.0 34 35.69210184479508 38.0 35.0 40.0 29.0 40.0 35 35.48875759876945 38.0 34.0 40.0 28.0 40.0 36 35.25846121680285 37.0 34.0 40.0 28.0 40.0 37 35.03265704770246 37.0 34.0 40.0 27.0 40.0 38 34.776064067387075 37.0 33.0 40.0 26.0 40.0 39 34.590126718246886 37.0 33.0 40.0 26.0 40.0 40 34.35388256518799 36.0 33.0 39.0 26.0 40.0 41 34.1726757232198 36.0 33.0 39.0 25.0 40.0 42 34.01456699482349 35.0 33.0 39.0 24.0 40.0 43 33.767479537846 35.0 33.0 39.0 24.0 40.0 44 33.58558383360301 35.0 33.0 39.0 23.0 40.0 45 33.36597143618198 35.0 33.0 39.0 23.0 40.0 46 33.11232152749389 35.0 32.0 38.0 23.0 40.0 47 32.96744635011414 35.0 32.0 38.0 23.0 40.0 48 32.771387427510255 35.0 32.0 38.0 23.0 40.0 49 32.66577374777369 35.0 32.0 37.0 23.0 40.0 50 32.4406458871293 35.0 31.0 37.0 22.0 40.0 51 32.24543080939948 35.0 31.0 37.0 22.0 39.0 52 32.05220904984254 35.0 31.0 36.0 20.0 39.0 53 31.83034837760152 35.0 31.0 36.0 20.0 39.0 54 31.657995401650304 34.0 31.0 36.0 20.0 39.0 55 31.536698350222785 34.0 31.0 35.0 20.0 39.0 56 31.322690890515407 34.0 30.0 35.0 20.0 38.0 57 31.178891689531735 34.0 30.0 35.0 20.0 38.0 58 30.997742595129985 34.0 30.0 35.0 18.0 38.0 59 30.508456822966277 34.0 29.0 35.0 18.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 4.0 13 13.0 14 47.0 15 143.0 16 591.0 17 1506.0 18 3263.0 19 6082.0 20 10259.0 21 15881.0 22 22935.0 23 31114.0 24 40834.0 25 53542.0 26 67508.0 27 83301.0 28 97731.0 29 111566.0 30 130334.0 31 155340.0 32 189290.0 33 240693.0 34 345093.0 35 507519.0 36 633654.0 37 822545.0 38 695584.0 39 114764.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.910905319783424 20.701406963534808 34.24451232636642 17.143175390315346 2 24.411425618509533 22.90966933926056 34.56091421016964 18.11799083206026 3 17.18946474396943 22.80239125140346 36.52152397882102 23.486620025806086 4 18.809067143985683 24.820885537247523 35.87680549592492 20.493241822841878 5 0.0 0.0 100.0 0.0 6 0.0 0.0 0.0 100.0 7 0.0 0.0 100.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 0.0 100.0 10 0.0 0.0 0.0 100.0 11 98.73571632204151 0.7958436360241645 0.14633187686210225 0.32210816507221757 12 98.70150145955262 0.9806586737643677 0.13558124295131604 0.18225862373169338 13 96.18964209519127 2.399057596235863 0.6358851594917028 0.7754151490811632 14 59.64629729679761 25.019715201784376 5.516718605238776 9.817268896179234 15 34.97130995903574 23.678670628195377 17.404523072435307 23.945496340333573 16 30.068222016339597 16.66227283008954 28.132468808895954 25.13703634467491 17 23.28365901363048 17.21900045581775 29.280093272591113 30.21724725796066 18 23.49846626572052 18.986349890450814 31.470255324131614 26.04492851969706 19 25.933245182700286 18.120798322444607 29.149624857656814 26.79633163719829 20 28.393382813639473 18.755724826683117 26.051639106469395 26.799253253208015 21 31.10674238217157 19.495441480145452 20.978549632207347 28.419266505475633 22 30.350021010527634 20.62880024066812 22.01647654478735 27.0047022040169 23 29.69646920422712 21.206595456841455 21.280685812838083 27.81624952609334 24 28.893481304054173 23.37895391082269 20.909709054978194 26.817855730144935 25 31.142737604416386 20.955336480005077 22.551406176067992 25.350519739510542 26 30.774385735940236 19.560766988112903 21.590970563120944 28.073876712825918 27 31.08841380673556 21.52313429139513 20.382174764222164 27.006277137647146 28 31.63970905269568 21.540253135202118 19.06922791960169 27.75080989250051 29 30.163243012030893 20.132490721016026 19.43116592793149 30.273100339021582 30 29.818264071632544 21.10700943613496 20.091565271754796 28.983161220477697 31 28.000151558830506 21.0567028604675 20.214706821539703 30.72843875916229 32 29.78236014988803 23.23467629521743 18.703067263132837 28.279896291761702 33 30.790705700369564 23.05422085636674 19.63663770386546 26.518435739398242 34 29.40181966462131 22.776142357566084 20.28432345302144 27.53771452479117 35 31.91787885199664 22.682696295505025 19.282597188811945 26.116827663686394 36 33.57779042289707 21.889842750865814 20.538275794616787 23.99409103162033 37 32.183152455629674 21.90262482090836 20.76504341224664 25.14917931121533 38 29.79521069530581 24.811162033965157 22.119646110130773 23.273981160598264 39 30.960752882185606 25.185494085211214 21.941290582787072 21.912462449816108 40 31.01108228297814 25.824551937088476 19.18992718100347 23.97443859892991 41 30.631226551463698 25.9102374566237 18.90075567141589 24.55778032049671 42 31.9256165693974 25.165681876645262 18.539799143464357 24.368902410492986 43 31.70268357278031 24.14526183499854 18.510035180365282 25.64201941185587 44 29.64296711104903 25.244063356156175 18.500311677082912 26.612657855711884 45 26.74876407653995 24.45951815704462 19.054300287802004 29.737417478613427 46 27.470471706317333 23.418441377204136 20.40105114266 28.710035773818532 47 29.281645381096276 21.259093244516205 21.795666284802323 27.66359508958519 48 29.374703416031046 20.99464134538591 21.18847230753113 28.442182931051917 49 28.893823680930314 21.836934110939694 21.32877835137317 27.94046385675682 50 28.659866148901532 22.911175797515575 20.83475134422868 27.594206709354214 51 28.128337461257203 22.55770591058896 22.392794381915017 26.921162246238815 52 29.042323944674635 22.453372263866665 22.702508504070977 25.801795287387723 53 28.531680246474835 22.953972907033037 22.493772735251145 26.020574111240986 54 26.59111093764016 22.737362470061996 22.9029815776133 27.76854501468454 55 26.77311848499602 22.624515051686355 22.261778163978892 28.34058829933873 56 26.952820694719204 23.363524126271333 23.085285851595145 26.59836932741432 57 27.125652541794516 23.01402581110794 23.26361855381377 26.596703093283775 58 28.281653826392557 21.189750514535383 23.29824426855403 27.23035139051803 59 26.832167083567576 22.477498421071974 21.860672241018715 28.829662254341738 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 3.0 7 6.0 8 39.0 9 210.5 10 349.0 11 524.0 12 699.0 13 857.5 14 1195.0 15 1374.0 16 1520.5 17 1667.0 18 1764.5 19 2192.0 20 2522.0 21 3133.0 22 3744.0 23 5212.5 24 6681.0 25 8648.5 26 13899.0 27 17182.0 28 20339.0 29 23496.0 30 26402.0 31 32339.0 32 35370.0 33 38732.5 34 42095.0 35 42433.5 36 45896.0 37 49020.0 38 51295.5 39 53571.0 40 56273.0 41 58975.0 42 69268.0 43 83350.5 44 87140.0 45 87917.5 46 88695.0 47 100373.0 48 122079.5 49 132108.0 50 149179.0 51 166250.0 52 189738.0 53 230357.0 54 247488.0 55 268269.5 56 289051.0 57 327002.0 58 390927.0 59 416901.0 60 401274.0 61 385647.0 62 359063.5 63 332480.0 64 303015.0 65 250060.0 66 226570.0 67 190360.0 68 154150.0 69 140731.5 70 115460.5 71 103608.0 72 91330.5 73 79053.0 74 71624.5 75 48021.5 76 31847.0 77 21324.0 78 10801.0 79 8962.0 80 7123.0 81 4840.5 82 1737.0 83 916.0 84 879.5 85 843.0 86 581.0 87 295.5 88 272.0 89 156.0 90 40.0 91 35.0 92 15.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 4381137.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.299731605850038 #Duplication Level Percentage of deduplicated Percentage of total 1 81.25611035079741 10.806844590009387 2 6.802545794582551 1.809440666089036 3 2.95873125626016 1.180509948062989 4 1.704706094238041 0.9068853408089137 5 1.0885097166818265 0.7238443541114078 6 0.697092481468361 0.5562685744791116 7 0.46257996479260305 0.4306532564589626 8 0.33676341760567163 0.35830904550593806 9 0.2453076889850199 0.29362737819168905 >10 1.6786790760195316 4.573083218624427 >50 0.6113684134820914 6.132279808760624 >100 2.008721246746522 58.7689298931626 >500 0.1405162829767488 12.009822243999203 >1k 0.008368215363379582 1.4495016817357287 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0026477145088135796 0.0 0.0 0.0 0.0 12 0.0063453847711222 0.0 0.0 0.0 0.0 13 0.00821704502735249 0.0 0.0 0.0 0.0 14 0.015749336302425605 0.0 0.0 0.0 0.0 15 0.028189029468834233 0.0 0.0 0.0 0.0 16 0.04110805026183842 0.0 0.0 0.0 0.0 17 0.05373034442885488 0.0 0.0 0.0 0.0 18 0.06920577923036873 0.0 0.0 0.0 0.0 19 0.08577682003552958 0.0 0.0 0.0 0.0 20 0.10369454322017321 0.0 0.0 0.0 0.0 21 0.12227419503202022 0.0 0.0 0.0 0.0 22 0.1413559995955388 0.0 0.0 0.0 0.0 23 0.16007260215784166 0.0 0.0 0.0 0.0 24 0.18091194135221061 0.0 0.0 0.0 0.0 25 0.20282406142515058 0.0 0.0 0.0 2.2825125075979134E-5 26 0.2274295462570561 0.0 0.0 0.0 2.2825125075979134E-5 27 0.2528339104666209 0.0 0.0 0.0 2.2825125075979134E-5 28 0.2768915922967029 0.0 0.0 0.0 2.2825125075979134E-5 29 0.3048751956398533 0.0 0.0 0.0 2.2825125075979134E-5 30 0.33721839787251573 0.0 0.0 0.0 2.2825125075979134E-5 31 0.37109088348526875 0.0 0.0 0.0 2.2825125075979134E-5 32 0.39727130194741683 0.0 0.0 0.0 2.2825125075979134E-5 33 0.41649005726139127 0.0 0.0 0.0 2.2825125075979134E-5 34 0.43513818444846625 0.0 0.0 0.0 2.2825125075979134E-5 35 0.4519146513793109 0.0 0.0 0.0 2.2825125075979134E-5 36 0.4700606258147143 0.0 0.0 0.0 2.2825125075979134E-5 37 0.48818377512504174 0.0 0.0 0.0 2.2825125075979134E-5 38 0.5083611856922073 0.0 0.0 0.0 2.2825125075979134E-5 39 0.5345644292794314 0.0 0.0 0.0 2.2825125075979134E-5 40 0.5651500968812434 0.0 0.0 0.0 2.2825125075979134E-5 41 0.5920380942207468 0.0 0.0 0.0 2.2825125075979134E-5 42 0.6165294534272724 0.0 0.0 0.0 2.2825125075979134E-5 43 0.6392176277527957 0.0 0.0 0.0 2.2825125075979134E-5 44 0.6612666985761915 0.0 0.0 0.0 2.2825125075979134E-5 45 0.6841831241524746 0.0 0.0 0.0 2.2825125075979134E-5 46 0.7071451999789096 0.0 0.0 0.0 2.2825125075979134E-5 47 0.7267291572940997 0.0 0.0 0.0 2.2825125075979134E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 30 7.015042E-7 53.000004 27 AATCACG 15 0.006697516 53.000004 30 CTAACGT 30 7.015042E-7 53.000004 53 ATATACG 30 7.015042E-7 53.000004 14 ATACGTC 30 7.015042E-7 53.000004 46 CGATATT 15 0.006697516 53.000004 50 TAATCGC 15 0.006697516 53.000004 25 CCGATTA 95 0.0 53.0 49 CGATTTA 40 1.6025297E-9 53.0 33 ATCCGAT 35 3.3449396E-8 53.0 40 TTACGTA 25 1.47942155E-5 53.0 18 ACGTATA 20 3.1392204E-4 53.0 35 TAACTAG 20 3.1392204E-4 53.0 40 CGATCTA 3575 0.0 50.62797 2 TACGTCT 1475 0.0 50.48474 1 ACCGGGG 264630 0.0 50.314247 8 TTATCTA 14650 0.0 50.286694 2 CGTAATT 95 0.0 50.21053 45 ACGTCTA 4930 0.0 50.20487 2 TTTCTAC 61775 0.0 50.061516 3 >>END_MODULE