##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527976_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1810886 Sequences flagged as poor quality 0 Sequence length 59 %GC 60 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.468110085339443 31.0 31.0 34.0 30.0 34.0 2 31.992243023580723 33.0 31.0 34.0 30.0 34.0 3 32.212530220013846 34.0 31.0 34.0 30.0 34.0 4 35.88822764105526 37.0 35.0 37.0 35.0 37.0 5 35.939693608543 37.0 35.0 37.0 35.0 37.0 6 36.0760130676365 37.0 35.0 37.0 35.0 37.0 7 35.63811084739735 37.0 35.0 37.0 33.0 37.0 8 35.13078901708887 37.0 35.0 37.0 32.0 37.0 9 36.6910782898537 38.0 37.0 39.0 32.0 39.0 10 37.421501960918576 39.0 37.0 39.0 35.0 39.0 11 37.61170112309665 39.0 37.0 39.0 35.0 39.0 12 37.63457059141216 39.0 37.0 39.0 35.0 39.0 13 37.60646722101778 39.0 37.0 39.0 35.0 39.0 14 38.01748425908644 40.0 38.0 40.0 34.0 40.0 15 37.34917217317932 40.0 37.0 40.0 32.0 40.0 16 36.819895896262935 39.0 35.0 40.0 31.0 40.0 17 36.73424831822655 39.0 35.0 40.0 31.0 40.0 18 36.73932870429171 39.0 35.0 40.0 30.0 40.0 19 36.93301842302608 39.0 36.0 40.0 31.0 40.0 20 37.067354874906535 39.0 36.0 40.0 31.0 40.0 21 36.97727245116479 39.0 35.0 40.0 31.0 40.0 22 36.90011022228898 39.0 35.0 40.0 31.0 40.0 23 36.85066426047802 39.0 35.0 40.0 31.0 40.0 24 36.749167534565956 39.0 35.0 40.0 31.0 40.0 25 36.59209193731687 39.0 35.0 40.0 30.0 40.0 26 36.34334905676006 39.0 35.0 40.0 30.0 40.0 27 36.12343018831666 39.0 35.0 40.0 30.0 40.0 28 36.02964902263312 38.0 35.0 40.0 30.0 40.0 29 35.932811342072334 38.0 35.0 40.0 29.0 40.0 30 35.78391847968343 38.0 35.0 40.0 29.0 40.0 31 35.70228440663852 38.0 35.0 40.0 29.0 40.0 32 35.419942503282925 37.0 34.0 40.0 28.0 40.0 33 35.155147259407826 37.0 34.0 40.0 28.0 40.0 34 35.01209297548272 37.0 34.0 40.0 28.0 40.0 35 34.7691014232812 36.0 33.0 39.0 27.0 40.0 36 34.47222464583635 35.0 33.0 39.0 27.0 40.0 37 34.195645667369455 35.0 33.0 39.0 26.0 40.0 38 33.89235711138084 35.0 33.0 39.0 26.0 40.0 39 33.68993796406842 35.0 33.0 38.0 26.0 40.0 40 33.44606286646426 35.0 33.0 38.0 25.0 40.0 41 33.24624189485147 35.0 32.0 37.0 24.0 40.0 42 33.083845145415005 35.0 32.0 37.0 24.0 40.0 43 32.788034144612084 35.0 32.0 37.0 23.0 39.0 44 32.56936549291341 35.0 32.0 36.0 23.0 39.0 45 32.3337730812431 35.0 31.0 36.0 23.0 39.0 46 32.13707709927627 35.0 31.0 35.0 23.0 39.0 47 32.0212663856256 35.0 31.0 35.0 23.0 38.0 48 31.842036991837144 34.0 31.0 35.0 22.0 37.0 49 31.738713535805125 34.0 31.0 35.0 22.0 37.0 50 31.540375263821137 34.0 31.0 35.0 22.0 37.0 51 31.405369526298177 34.0 31.0 35.0 22.0 36.0 52 31.224702714582808 34.0 31.0 35.0 20.0 36.0 53 31.025819405528566 34.0 30.0 35.0 20.0 36.0 54 30.90290774792008 34.0 30.0 35.0 20.0 36.0 55 30.786486835725718 34.0 30.0 35.0 20.0 35.0 56 30.644540849065045 34.0 30.0 35.0 20.0 35.0 57 30.492308185054167 34.0 30.0 35.0 20.0 35.0 58 30.324001069089938 34.0 29.0 35.0 18.0 35.0 59 29.869743319016216 33.0 29.0 35.0 18.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 4.0 12 5.0 13 8.0 14 20.0 15 83.0 16 261.0 17 664.0 18 1560.0 19 3078.0 20 5155.0 21 7332.0 22 10305.0 23 14003.0 24 18123.0 25 23394.0 26 29321.0 27 35747.0 28 42463.0 29 50217.0 30 59234.0 31 71160.0 32 87773.0 33 110755.0 34 158257.0 35 248511.0 36 369976.0 37 320712.0 38 136136.0 39 6628.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.481875722712527 23.207700539956686 32.95613307519082 20.354290662139967 2 26.10313404598633 23.274849990557108 33.03432684332421 17.587689120132353 3 16.87974836626933 25.579688616511476 35.86393621685738 21.676626800361813 4 16.681668531315612 26.892581863242633 34.13312599467885 22.292623610762906 5 0.0 100.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 0.0 0.0 0.0 100.0 8 100.0 0.0 0.0 0.0 9 0.0 0.0 0.0 100.0 10 0.0 0.0 0.0 100.0 11 98.34302104052934 1.0470565237127019 0.0849308018284972 0.5249916339294688 12 98.63431491546127 1.1399944557525985 0.0734447115942141 0.152245917191916 13 96.60177393828214 1.972018117098481 0.6009213169685999 0.8252866276507743 14 61.8347593387988 22.547968232125047 6.422712418120192 9.194560010955962 15 34.19624426937974 25.74894278270416 17.86699991054103 22.187813037375076 16 27.498914895802386 17.416170868845416 28.59235755315354 26.49255668219866 17 23.299313153892626 16.783994133258524 30.46442459657869 29.452268116270158 18 23.688735790104953 17.304071045885827 30.96572616939995 28.04146699460927 19 24.261604540539825 16.41157974604696 27.345288438918853 31.981527274494365 20 28.682258297871872 16.893553763185533 23.949768234996572 30.474419703946026 21 30.04689417224497 17.981639926533198 20.7714897569477 31.199976144274128 22 28.781822820431547 19.2194318140402 21.669227107614724 30.32951825791353 23 29.994875436664703 18.785776686108346 19.7125053702994 31.506842506927548 24 29.469331586858587 19.8173711652749 21.090946641588705 29.62235060627781 25 33.74072139273262 16.09620925889316 21.17322680720929 28.989842541164933 26 33.91947367200365 16.387668798588095 20.057529850029212 29.635327679379042 27 31.462554793620363 19.684508025353338 19.26405085687338 29.58888632415293 28 30.30869971936389 19.82322465356737 19.88661903620659 29.981456590862155 29 32.88053472167768 18.225111906547404 18.77903965241324 30.11531371936168 30 30.113491406968745 19.20512942283501 19.132126483942113 31.549252686254132 31 32.522698833609624 17.654341576443798 20.15792269640386 29.66503689354272 32 32.79969031733638 20.155272060195948 17.869595325161274 29.175442297306404 33 31.06661601006358 21.000051908292406 19.965033690690635 27.96829839095338 34 29.627872765044295 21.94605292657848 20.108941148145163 28.31713316023206 35 32.0981000460548 22.387162968845082 18.49619468039402 27.018542304706095 36 34.295587905588754 21.853556767239905 17.901568624419205 25.949286702752133 37 34.27570813402942 20.251578509083398 19.619346551908844 25.853366804978332 38 31.52727449436353 24.22178977583349 21.424153701558243 22.82678202824474 39 33.04073254749333 22.870848855201267 21.262741000813968 22.825677596491442 40 32.78798334075143 22.627763426300717 18.321749684960842 26.26250354798701 41 32.55296026364995 23.55095792888122 17.545886378270083 26.35019542919875 42 32.2379763276098 23.25971927553695 17.302690506194203 27.199613890659048 43 32.919134611455384 22.535322488549802 18.648551040761262 25.896991859233548 44 31.86048155433307 23.287550955720018 18.748667779197586 26.103299710749322 45 29.371368490341194 22.585518911737125 19.864585622728324 28.178526975193357 46 29.38760363711465 19.908762892860178 22.1221545696416 28.581478900383566 47 29.673706682806095 18.996888815750964 24.609997537117188 26.71940696432575 48 28.908777250472973 20.156045162423254 22.364743004253164 28.570434582850606 49 30.713363513771714 19.207614394279926 21.98316183348924 28.095860258459123 50 29.437082179662333 21.61593827551817 20.200829870019426 28.74614967480007 51 30.45757711970825 21.52603753079984 21.755869778660834 26.26051557083107 52 30.457135347006936 20.987571829480157 21.805403542796178 26.749889280716733 53 27.39581619163216 22.223983177295533 22.262251737547256 28.117948893525046 54 27.826378910654785 21.32381607677126 22.16826459534173 28.681540417232227 55 29.015631022604403 22.314877910591832 20.477434802632523 28.19205626417124 56 30.109460231069214 22.193390417729223 20.314972891722615 27.382176459478952 57 28.942462418948516 21.149702410864073 21.300733453127364 28.607101717060047 58 29.262858070579817 20.556567337756213 21.84505264273952 28.33552194892445 59 27.84211706313926 21.59434663474123 22.339175409164355 28.224360892955165 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 1.5 9 8.5 10 14.0 11 63.5 12 113.0 13 145.5 14 208.0 15 238.0 16 301.5 17 365.0 18 390.0 19 385.5 20 356.0 21 479.5 22 603.0 23 759.0 24 915.0 25 1471.0 26 2716.0 27 3405.0 28 4548.0 29 5691.0 30 6535.5 31 8099.0 32 8818.0 33 9285.0 34 9752.0 35 10573.5 36 10874.5 37 10354.0 38 12018.5 39 13683.0 40 13038.0 41 12393.0 42 13207.5 43 16478.0 44 18934.0 45 21703.5 46 24473.0 47 25806.5 48 32764.5 49 38389.0 50 42293.0 51 46197.0 52 51285.5 53 66931.0 54 77488.0 55 88455.5 56 99423.0 57 112151.0 58 143541.0 59 162203.0 60 171548.5 61 180894.0 62 178070.5 63 175247.0 64 165080.0 65 139067.5 66 123222.0 67 116742.5 68 110263.0 69 100969.0 70 77571.0 71 63467.0 72 56225.0 73 48983.0 74 42599.0 75 31802.0 76 27389.0 77 18905.0 78 10421.0 79 8225.0 80 6029.0 81 3913.0 82 1592.0 83 1387.0 84 1002.0 85 617.0 86 487.5 87 266.0 88 174.0 89 145.0 90 116.0 91 92.0 92 48.0 93 28.0 94 15.5 95 3.0 96 1.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 1810886.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.50271397040595 #Duplication Level Percentage of deduplicated Percentage of total 1 82.6280848367404 11.157033954729426 2 6.647952207650899 1.7953079429767773 3 2.818233705288314 1.1416141087279632 4 1.6092535766981644 0.8691716300803219 5 0.9407289332268426 0.6351196854523586 6 0.6137006407070933 0.49719745289536504 7 0.44419569204769166 0.4198493163624554 8 0.28969596925621366 0.3129345448996935 9 0.2121458202870303 0.2578089898217623 >10 1.3923170881666516 3.81869816621542 >50 0.3818108654871806 3.804956137628928 >100 1.8518235766132634 59.67223074542925 >500 0.15983731091739206 14.009666013945484 >1k 0.010219776912876729 1.6084113108347946 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.004307283837856166 0.0 0.0 0.0 0.0 12 0.007178806396426943 0.0 0.0 0.0 0.0 13 0.008504124500382685 0.0 0.0 0.0 0.0 14 0.01761568646507842 0.0 0.0 0.0 0.0 15 0.02661680525444451 0.0 0.0 0.0 0.0 16 0.03821333866405726 0.0 0.0 0.0 0.0 17 0.04909199143402732 0.0 0.0 0.0 0.0 18 0.060633303255975254 0.0 0.0 0.0 0.0 19 0.07256116619157695 0.0 0.0 0.0 0.0 20 0.08741577327341422 0.0 0.0 0.0 0.0 21 0.1029882609948942 0.0 0.0 0.0 0.0 22 0.11673843632343504 0.0 0.0 0.0 0.0 23 0.13109604911628894 0.0 0.0 0.0 0.0 24 0.14490144603249458 0.0 0.0 0.0 0.0 25 0.1607500416922987 0.0 0.0 0.0 0.0 26 0.17864183609570122 0.0 0.0 0.0 0.0 27 0.19603663621012035 0.0 0.0 0.0 0.0 28 0.21541941348047308 0.0 0.0 0.0 0.0 29 0.23701105425741875 0.0 0.0 0.0 0.0 30 0.2642352969761763 0.0 0.0 0.0 0.0 31 0.29195653398391724 0.0 0.0 0.0 0.0 32 0.3147078281018242 0.0 0.0 0.0 0.0 33 0.330335537410969 0.0 0.0 0.0 0.0 34 0.3478407807007178 0.0 0.0 0.0 0.0 35 0.36479380811381834 0.0 0.0 0.0 0.0 36 0.3812498412379355 0.0 0.0 0.0 0.0 37 0.39709843689773955 0.0 0.0 0.0 0.0 38 0.4170886516324053 0.0 0.0 0.0 0.0 39 0.4387907355846806 0.0 0.0 0.0 0.0 40 0.46419266591049907 0.0 0.0 0.0 0.0 41 0.4872200679667301 0.0 0.0 0.0 0.0 42 0.5079833849287034 0.0 0.0 0.0 0.0 43 0.5312868949232585 0.0 0.0 0.0 0.0 44 0.5536516379275117 0.0 0.0 0.0 0.0 45 0.576899926334402 0.0 0.0 0.0 0.0 46 0.5974423569457161 0.0 0.0 0.0 0.0 47 0.616162475164091 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTAT 15 0.0066968855 53.000004 34 TAATAGA 30 7.0127317E-7 53.000004 45 ACAAATT 15 0.0066968855 53.000004 26 AATCATA 30 7.0127317E-7 53.000004 30 CATATGA 30 7.0127317E-7 53.000004 33 CTACTAT 15 0.0066968855 53.000004 40 TACTTAT 15 0.0066968855 53.000004 46 TGCCATA 15 0.0066968855 53.000004 52 CAACGTT 30 7.0127317E-7 53.000004 20 CCGATAC 15 0.0066968855 53.000004 30 GTTTACT 15 0.0066968855 53.000004 43 CTATATA 15 0.0066968855 53.000004 32 GGCAATT 15 0.0066968855 53.000004 27 CACATAG 15 0.0066968855 53.000004 23 ATTACGA 15 0.0066968855 53.000004 44 TATATGT 15 0.0066968855 53.000004 51 AAGGTTA 15 0.0066968855 53.000004 46 TATATCA 15 0.0066968855 53.000004 41 CTAAGTC 15 0.0066968855 53.000004 45 CAATTGA 15 0.0066968855 53.000004 15 >>END_MODULE