##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527974_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 125776 Sequences flagged as poor quality 0 Sequence length 52 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.83826803205699 31.0 31.0 33.0 30.0 33.0 2 31.549222427172115 31.0 31.0 34.0 30.0 34.0 3 31.90435377178476 33.0 31.0 34.0 30.0 34.0 4 35.716464190306574 37.0 35.0 37.0 33.0 37.0 5 35.922775410253145 37.0 35.0 37.0 35.0 37.0 6 35.95138182165119 37.0 35.0 37.0 35.0 37.0 7 35.869800279862616 37.0 35.0 37.0 35.0 37.0 8 34.3216511894161 35.0 35.0 36.0 32.0 37.0 9 37.041756773947334 39.0 37.0 39.0 33.0 39.0 10 35.85502003561888 37.0 35.0 39.0 32.0 39.0 11 37.774480027986264 39.0 37.0 39.0 35.0 39.0 12 38.18386655641776 39.0 39.0 39.0 37.0 39.0 13 38.13489854980283 39.0 39.0 39.0 37.0 39.0 14 38.57863185345376 40.0 39.0 40.0 36.0 40.0 15 37.723627719119705 40.0 37.0 40.0 33.0 40.0 16 36.62115983971505 38.0 35.0 40.0 31.0 40.0 17 36.37756805749905 38.0 35.0 40.0 31.0 40.0 18 36.427021053301104 38.0 35.0 40.0 31.0 40.0 19 36.68140185727007 39.0 35.0 40.0 31.0 40.0 20 36.741564368400965 39.0 35.0 40.0 32.0 40.0 21 36.942151125810966 39.0 35.0 40.0 32.0 40.0 22 37.033869736674724 39.0 35.0 40.0 32.0 40.0 23 36.90829729042107 39.0 35.0 40.0 32.0 40.0 24 37.02908344994275 39.0 35.0 40.0 32.0 40.0 25 36.73181688080397 39.0 35.0 40.0 32.0 40.0 26 36.6601895433151 39.0 35.0 40.0 32.0 40.0 27 36.291709070092864 38.0 35.0 40.0 31.0 40.0 28 35.996811792392826 38.0 35.0 40.0 30.0 40.0 29 35.94835262689225 38.0 35.0 40.0 30.0 40.0 30 35.89500381630836 38.0 35.0 40.0 30.0 40.0 31 35.73048912352118 38.0 35.0 40.0 30.0 40.0 32 35.425256010685665 37.0 35.0 40.0 29.0 40.0 33 35.04701214858161 36.0 34.0 40.0 26.0 40.0 34 34.798554573209515 36.0 34.0 40.0 25.0 40.0 35 34.44058484925582 35.0 33.0 40.0 24.0 40.0 36 33.7403161175423 35.0 33.0 40.0 21.0 40.0 37 33.758364075817326 35.0 33.0 40.0 21.0 40.0 38 33.46659935122758 35.0 33.0 40.0 21.0 40.0 39 33.03922051901794 35.0 33.0 40.0 18.0 40.0 40 32.45385447144129 35.0 33.0 39.0 15.0 40.0 41 31.82350368909808 35.0 31.0 39.0 12.0 40.0 42 30.978493512275794 35.0 30.0 38.0 10.0 40.0 43 30.23770830683119 35.0 26.0 38.0 9.0 40.0 44 29.500604248823304 35.0 23.0 37.0 8.0 40.0 45 28.644113344358225 35.0 20.0 36.0 8.0 40.0 46 28.12290898104567 34.0 20.0 36.0 8.0 40.0 47 27.685385129118433 34.0 17.0 35.0 8.0 40.0 48 27.16018159267269 33.0 15.0 35.0 8.0 40.0 49 26.76012911843277 33.0 12.0 35.0 8.0 40.0 50 26.200976338888182 33.0 10.0 35.0 8.0 40.0 51 25.804819679430096 33.0 10.0 35.0 8.0 40.0 52 25.013015201628292 32.0 10.0 35.0 8.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 1.0 15 4.0 16 20.0 17 48.0 18 116.0 19 235.0 20 350.0 21 616.0 22 838.0 23 1132.0 24 1665.0 25 2228.0 26 2898.0 27 3923.0 28 4968.0 29 6034.0 30 6986.0 31 7189.0 32 6926.0 33 6621.0 34 7802.0 35 10770.0 36 13564.0 37 19712.0 38 16767.0 39 4362.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.000667853962604 24.507060170461774 30.81112453886274 3.6811474367128865 2 33.2050629690879 21.353040325658313 28.508618496374506 16.933278208879276 3 23.038576516982573 19.67783996946953 36.51412034092355 20.76946317262435 4 30.293537717847602 25.434900139931305 23.720741635924185 20.550820506296912 5 0.0 0.0 0.0 100.0 6 0.0 0.0 100.0 0.0 7 100.0 0.0 0.0 0.0 8 0.0 0.0 100.0 0.0 9 100.0 0.0 0.0 0.0 10 0.0 0.0 100.0 0.0 11 97.71737056354154 1.4454267904846712 0.5191769494975195 0.3180256964762753 12 97.58857015646865 0.8698002798626129 1.2728978501462918 0.2687317135224526 13 95.67405546368147 2.302506042488233 1.4311156341432387 0.5923228596870628 14 59.37062714667345 23.481427299325787 9.11382139676886 8.034124157231904 15 40.80667217911208 34.574163592418266 14.27855870754357 10.340605520926092 16 45.39180765805877 25.544619005215623 19.420239155323753 9.643334181401856 17 31.083831573591148 27.72309502607811 21.965239791375144 19.227833608955603 18 25.138341177967177 36.65564177585549 21.125651952677778 17.080365093499555 19 28.612771911970487 39.09092354662257 22.716575499300344 9.579729042106603 20 21.044555400076327 38.87864139422466 24.209706144256458 15.867097061442564 21 22.384238646482636 39.67291057117415 19.747805622694315 18.195045159648902 22 24.70026078107111 38.566976211677904 16.933278208879276 19.799484798371708 23 17.79433278208879 40.157899758300466 27.58554891235212 14.462218547258617 24 25.687730568629945 42.54945299580206 17.500159012848236 14.262657422719755 25 24.783742526396132 39.373171352245265 25.46034219564941 10.382743925709196 26 27.24923673832846 44.13322096425391 17.418267396005596 11.199274901412034 27 24.53568248314464 43.92968451850909 22.567898486197684 8.966734512148582 28 32.58570792520036 43.579061188144 12.54531866174787 11.289912224907772 29 31.61811474367129 44.19762116779036 12.045223254038927 12.139040834499427 30 34.77372471695713 47.100400712377564 9.94625365729551 8.179620913369801 31 29.938144002035365 49.36553873552983 11.489473349446635 9.20684391298817 32 26.816721791120724 54.52471059661621 9.239441546876987 9.419126065386083 33 22.696698893270575 56.68251494720773 10.095725734639359 10.52506042488233 34 17.972427172115506 61.03310647500319 12.53577789085358 8.458688462027732 35 21.198002798626128 58.92459610736548 11.44733494466353 8.430066149344867 36 16.204204299707417 60.414546495356824 14.164069456812111 9.217179748123648 37 15.909235466225672 62.48091845821142 12.803714540134841 8.806131535428062 38 16.226466098460758 62.79258364075817 11.157931560870118 9.823018699910953 39 15.068057499045922 63.40239791375143 11.925963617860322 9.603580969342323 40 15.301011321714794 60.19828902175296 11.347156850273501 13.153542806258745 41 16.720200992240173 58.071492176567865 14.575912733748886 10.632394097443074 42 19.24691515074418 56.21342704490523 14.385892380104313 10.153765424246279 43 22.059057371835642 56.22058262307594 11.90131662638341 9.819043378704999 44 21.807817071619386 54.67179748123648 12.908663019972014 10.611722427172115 45 22.994847983717083 53.51179875333927 12.618464571937412 10.874888691006234 46 22.235561633379977 51.1790802696858 14.08217783996947 12.503180256964763 47 26.136146800661493 48.991858542170206 12.141426027223 12.7305686299453 48 24.45617605902557 50.72191833100115 12.178794046558963 12.643111563414324 49 24.186649281261925 50.818121104185224 13.147182292329221 11.848047322223636 50 24.979328329729043 48.85669762116779 13.341177967179748 12.822796081923418 51 24.968992494593564 49.81156977483781 12.721822923292203 12.497614807276427 52 23.11808294110164 48.82250985879659 12.942055718102022 15.117351481999746 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.5 10 1.0 11 9.5 12 18.0 13 44.0 14 140.5 15 211.0 16 231.0 17 251.0 18 359.0 19 467.0 20 558.0 21 649.0 22 990.5 23 1332.0 24 1731.5 25 2131.0 26 2949.0 27 3767.0 28 4704.0 29 5641.0 30 6276.0 31 6911.0 32 7269.5 33 7628.0 34 7661.5 35 7695.0 36 8112.0 37 8529.0 38 8334.0 39 7692.0 40 7245.0 41 6659.0 42 6073.0 43 6242.5 44 6412.0 45 6751.5 46 7091.0 47 6404.5 48 5718.0 49 6247.0 50 6776.0 51 6729.5 52 6683.0 53 6289.0 54 5895.0 55 5963.5 56 6032.0 57 5395.5 58 4759.0 59 4251.5 60 3744.0 61 2754.5 62 1765.0 63 1511.0 64 1542.0 65 1827.0 66 1058.0 67 289.0 68 458.0 69 627.0 70 349.5 71 72.0 72 50.0 73 28.0 74 23.0 75 18.0 76 16.0 77 14.0 78 9.0 79 4.0 80 4.5 81 5.0 82 3.5 83 2.0 84 1.0 85 0.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 125776.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.264088538353896 #Duplication Level Percentage of deduplicated Percentage of total 1 87.31955996780252 51.74914133061952 2 4.847061980144889 5.745134206843913 3 2.0150254896699757 3.582559470805241 4 1.2557016367051248 2.976720519017937 5 0.9109203112422861 2.6992430988423863 6 0.713710759323853 2.5378450578806766 7 0.5030855916286557 2.0870436331255564 8 0.4172256506573652 1.9781198320824323 9 0.3394150791521331 1.810361277191197 >10 1.6004829621679637 14.796145528558707 >50 0.028172793131204722 1.2450706017046178 >100 0.042929970485645286 5.744339142602723 >500 0.005366246310705661 1.9979964381121995 >1k 0.0013415615776764152 1.050279862612899 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AATCCTGTGTGGGGGTCTGTGTGGGAGGCAGGCAGATCACTTGAGCCCAGGA 1321 1.050279862612899 No Hit AAGACTGTGTGGGGACTTGGAGCAGCTCTGCCGCGGGGACTGCACTGTCCGC 826 0.6567230632235085 No Hit GCTCCTGTGTATAAGAATGAACTAGAGTTGTCATTTTTCTCTTCACTGGATG 588 0.4674977738201247 No Hit GAGGCTGTGTGGGTCCCACCAGAAATTGAGGAGTCCCATCTGAGTCTTTTGC 558 0.44364584658440404 No Hit AATGCTGTGTGGGGCGGATTACCTGAGGTCAGGAGTTCCAGACCAACCTGAC 541 0.4301297544841623 No Hit TGGCCTGTGTGGGCCCCCTTCTGGAGGGCTTCCACTGCCCTTCCAGGCTGGG 490 0.3895814781834372 No Hit CGTGCTGTGTGGTCGGGGACAGTGGCTCATGCCTGTAATCCCAGCAGTTTAG 478 0.38004070728914896 No Hit ATGGCTGTGTGGGGCAGAGTCTGCAAAAAGAGAGATTCAAACTGCTGAATCA 473 0.3760653860831955 No Hit CTGTCTGTGTGGGGGCACTGTGCTAAACAATCTACAAAGCTTCTTCCAGCTC 413 0.32836153161175424 No Hit AGTGCTGTGTGGGATACACGTTTCTGGAAACTGCCTCGTCATGCGACTGTTC 304 0.24169952932196923 No Hit AGTTCTGTGTGGGGGCGGGCGGATAATGAGGTCAGGAGATCGAGACCATTGT 277 0.22023279480982064 No Hit GTCGCTGTGTAGGGTTCCGATGTTACCGGTTGGCGGTATCACACCGGAAACC 276 0.21943773056862995 No Hit GTGCCTGTGTGGTGCAGATATGGCTGCAGTGACCAAAAACTTAGATCACAAC 274 0.21784760208624857 No Hit GCTTCTGTGTGGGGGTGGGGACCACGTTCCAGGCGCCGGTGGACAGGTACAT 267 0.21228215239791373 No Hit GTACCTGTGTGGGTTGGGAGGGCCACCCAACCCTTCCCTGATGAACTCCCCC 257 0.20433150998600685 No Hit GAAGCTGTGTGGGTATGTGGTGTGTGTGTGTGGGTGTGTGTTGTGTGTGTGT 255 0.2027413815036255 No Hit TGTCCTGTGTGGGAGCCTTGGCTTTAACCCAACTAAATCAGAAGTGTTTGGT 250 0.19876606029767208 No Hit GACTCTGTGTTTGTCTGTTTAGTTCTGTGTGTAAATGAAATGTGGAAATGAC 249 0.19797099605648136 No Hit GCGTCTGTGTGGGGAGGCTGGGAAATACTAAATTTAATCAGTGTAGCCAGGG 245 0.1947907390917186 No Hit TTTTCTGTGTGGGGCGGACCCAGGTCTACTTGCTTCCTTCCCATTACACAAA 228 0.1812746469914769 No Hit GCGGCTGTGTGGGTGGGAAGCTATACTATATGGGAGGCTCTCTCATTGGTTT 221 0.1757091973031421 No Hit TTGCCTGTGTGGGGAAGGGATCCAGTTTCAGCTTTCTACATATGTCTAGCCA 205 0.16298816944409109 No Hit GGTTCTGTGTGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTT 183 0.14549675613789592 No Hit CATCCTGTGTGGGGGGAATTCGAGCTCGCATTTTGAAAATTCTATGGAAGAG 179 0.1423164991731332 No Hit CGGACTGTGTGGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAAC 168 0.13357079252003562 No Hit GGCCCTGTGTGAGGAACGATTGGTGTTGCTGCTGGTGGTTGGGAGTAGTTGT 164 0.13039053555527286 No Hit ATCACTGTGTGGGGGGAATTCACTGTCCTTTCATCCATAAGCGGAGAAAGAG 147 0.11687444345503117 No Hit GTTGCTGTGTGGGAGGGAATTCGAGCTCGCATTTTGAAAATTCTATGGAAGA 143 0.11369418649026843 No Hit GATGCTGTGTGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTT 141 0.11210405800788703 No Hit GGGCCTGTGTGGGGGGAATTCGAGCTCGCATTTTGAAAATTCTATGGAAGAG 135 0.1073336725607429 No Hit AAGGCTGTGTGGGGTGGTATCAACGCAGATTATTCCTGTGTGGGATAAAACA 130 0.10335835135478948 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.003975321205953441 0.0 0.0 0.0 0.0 12 0.03975321205953441 0.0 0.0 0.0 0.0 13 0.07235084594835263 0.0 0.0 0.0 0.0 14 0.19240554636814655 0.0 0.0 0.0 0.0 15 0.3784505788067676 0.0 0.0 0.0 0.0 16 0.5008904719501336 0.0 0.0 0.0 0.0 17 0.5994784378577789 0.0 0.0 0.0 0.0 18 0.7314591018954332 0.0 0.0 0.0 0.0 19 0.8912670143747615 0.0 0.0 0.0 0.0 20 1.0868528177076708 0.0 0.0 0.0 0.0 21 1.267332400457957 0.0 0.0 0.0 0.0 22 1.4470169189670525 0.0 0.0 0.0 0.0 23 1.6020544459992367 0.0 0.0 0.0 0.0 24 1.777763643302379 0.0 0.0 0.0 0.0 25 1.9868655387355298 0.0 0.0 0.0 0.0 26 2.236515710469406 0.0 0.0 0.0 0.0 27 2.5139931306449563 0.0 0.0 0.0 0.0 28 2.83042869863885 0.0 0.0 0.0 0.0 29 3.1969533138277573 0.0 0.0 0.0 0.0 30 3.5857397277700036 0.0 0.0 0.0 0.0 31 3.988042233812492 0.0 0.0 0.0 0.0 32 4.3434359496247295 0.0 0.0 0.0 0.0 33 4.665436967306959 0.0 0.0 0.0 0.0 34 5.022420811601577 0.0 0.0 0.0 0.0 35 5.365093499554764 0.0 0.0 0.0 0.0 36 5.656882076071747 0.0 0.0 0.0 0.0 37 5.932769367764916 0.0 0.0 0.0 0.0 38 6.224557944281898 0.0 0.0 0.0 0.0 39 6.517141585040071 0.0 0.0 0.0 0.0 40 6.776332527668235 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCAACTA 35 1.0098847E-7 46.000004 29 TCCCATT 35 1.0098847E-7 46.000004 39 GTTTGGT 35 1.0098847E-7 46.000004 46 CCAACCT 70 0.0 46.000004 43 CTGAGGT 70 0.0 46.000004 23 TAAATCA 35 1.0098847E-7 46.000004 34 ACTGATG 35 1.0098847E-7 46.000004 41 CTTTAAC 35 1.0098847E-7 46.000004 22 AAATTGA 35 1.0098847E-7 46.000004 23 ACGTTCC 35 1.0098847E-7 46.000004 24 GGACCAC 35 1.0098847E-7 46.000004 19 GAGCCTT 35 1.0098847E-7 46.000004 13 CCAGACC 70 0.0 46.000004 38 CGGATTA 70 0.0 46.000004 15 ACCAACC 70 0.0 46.000004 42 GCGGATT 70 0.0 46.000004 14 ACCTGTA 35 1.0098847E-7 46.000004 28 ATTACCT 70 0.0 46.000004 18 CTTGGCT 35 1.0098847E-7 46.000004 17 ACCTGAG 70 0.0 46.000004 21 >>END_MODULE