##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527972_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 13558254 Sequences flagged as poor quality 0 Sequence length 52 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.952522205292805 33.0 31.0 34.0 30.0 34.0 2 32.42723473096167 34.0 31.0 34.0 30.0 34.0 3 32.54533703233469 34.0 31.0 34.0 31.0 34.0 4 36.022701669403745 37.0 35.0 37.0 35.0 37.0 5 35.96428566687126 37.0 35.0 37.0 35.0 37.0 6 36.127845222548565 37.0 36.0 37.0 35.0 37.0 7 36.31025300160331 37.0 37.0 37.0 35.0 37.0 8 36.253232016452856 37.0 37.0 37.0 35.0 37.0 9 37.67452018526869 39.0 38.0 39.0 35.0 39.0 10 38.04647596954593 39.0 39.0 39.0 35.0 39.0 11 38.21227180136911 39.0 39.0 39.0 37.0 39.0 12 38.12496977855703 39.0 39.0 39.0 37.0 39.0 13 38.12087684741708 39.0 39.0 39.0 37.0 39.0 14 38.81111446945897 40.0 39.0 40.0 36.0 40.0 15 38.258299188081295 40.0 38.0 40.0 34.0 40.0 16 37.50129574206236 39.0 36.0 40.0 33.0 40.0 17 37.421093158455356 40.0 36.0 40.0 33.0 40.0 18 37.42369054304485 40.0 36.0 40.0 33.0 40.0 19 37.55828250451717 40.0 36.0 40.0 33.0 40.0 20 37.58309727786484 40.0 36.0 40.0 33.0 40.0 21 37.350858820022104 40.0 36.0 40.0 33.0 40.0 22 37.42097441160197 40.0 36.0 40.0 33.0 40.0 23 37.37201493643651 40.0 36.0 40.0 33.0 40.0 24 37.34884263121195 40.0 36.0 40.0 32.0 40.0 25 37.465460818184994 40.0 36.0 40.0 33.0 40.0 26 37.460961861313415 40.0 36.0 40.0 33.0 40.0 27 37.45613284719404 40.0 36.0 40.0 33.0 40.0 28 37.42301877513137 40.0 36.0 40.0 33.0 40.0 29 37.412790319461486 40.0 35.0 40.0 33.0 40.0 30 37.366135197054135 40.0 35.0 40.0 33.0 40.0 31 37.31956304993253 40.0 35.0 40.0 33.0 40.0 32 37.25395637225855 40.0 35.0 40.0 33.0 40.0 33 37.18182319050816 40.0 35.0 40.0 33.0 40.0 34 37.074393576046 40.0 35.0 40.0 33.0 40.0 35 36.97735976918562 39.0 35.0 40.0 32.0 40.0 36 36.89883277006022 39.0 35.0 40.0 32.0 40.0 37 36.76131432557614 39.0 35.0 40.0 32.0 40.0 38 36.52796289256714 39.0 35.0 40.0 31.0 40.0 39 36.39978444127098 39.0 35.0 40.0 31.0 40.0 40 36.29654496810578 39.0 35.0 40.0 31.0 40.0 41 36.144943220565125 38.0 35.0 40.0 31.0 40.0 42 35.9883519662635 38.0 35.0 40.0 31.0 40.0 43 35.817922278193045 38.0 35.0 40.0 30.0 40.0 44 35.65047188229399 37.0 35.0 40.0 30.0 40.0 45 35.47818480167137 37.0 35.0 40.0 30.0 40.0 46 35.34372560065625 37.0 35.0 40.0 30.0 40.0 47 35.176514542359214 36.0 34.0 40.0 29.0 40.0 48 35.034758752860064 36.0 34.0 40.0 29.0 40.0 49 34.87338863838957 36.0 34.0 40.0 28.0 40.0 50 34.71896868136561 35.0 34.0 39.0 28.0 40.0 51 34.547553173144564 35.0 34.0 39.0 28.0 40.0 52 33.89081949637468 35.0 33.0 38.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 2.0 13 10.0 14 23.0 15 56.0 16 193.0 17 543.0 18 1605.0 19 3459.0 20 6813.0 21 12000.0 22 19541.0 23 30434.0 24 44694.0 25 63186.0 26 87809.0 27 117719.0 28 153973.0 29 199378.0 30 251527.0 31 307980.0 32 374411.0 33 472465.0 34 724257.0 35 1511294.0 36 1108728.0 37 2098598.0 38 3946142.0 39 2021411.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.52256300848177 20.47474549451574 34.960334863176335 17.042356633826156 2 21.311320764458312 22.112876776021455 36.86050578488941 19.71529667463082 3 21.88200634093446 21.335726561841962 37.290207131390225 19.49205996583336 4 21.15312930411246 21.972040057665243 33.753918461772436 23.12091217644986 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 0.0 0.0 100.0 0.0 8 0.0 0.0 100.0 0.0 9 0.0 100.0 0.0 0.0 10 0.0 0.0 100.0 0.0 11 99.71112799627446 0.2213264333298373 0.05419576886522409 0.013349801530492054 12 99.62831497329965 0.26715829339087466 0.05679197336176177 0.04773475994770418 13 98.4492767284047 0.8560099257618273 0.20909034452371225 0.48562300130975566 14 66.43890135116219 19.457055458615837 5.444233453658561 8.659809736563425 15 37.838124289454974 24.443722620921545 15.200268412142155 22.517884677481334 16 31.822991367472536 16.990963585724238 24.989471358185206 26.19657368861802 17 24.448922405495573 16.57872761492741 28.032975337384887 30.93937464219213 18 23.390261017384688 17.62131023655406 31.582370414361616 27.40605833169964 19 26.44066854035925 17.34886365161768 28.196189568361824 28.014278239661245 20 30.248843250760753 17.296563407058166 24.575096468911113 27.879496873269964 21 31.98110169642787 18.27610693825326 21.343360288131496 28.39943107718737 22 31.605101954868232 19.55221520411109 21.850372474213863 26.992310366806816 23 29.997468700615876 20.988742355763506 20.819922683259954 28.19386626036066 24 30.334628632860838 22.978371698892794 19.63513148521926 27.051868183027107 25 31.090765816896482 20.919891307538567 22.425741544597113 25.56360133096784 26 30.524195814593824 20.038066848430482 21.88277340135389 27.5549639356218 27 32.13952917536432 20.07501850902041 20.969536342953894 26.815915972661376 28 33.35892659925091 19.954029479016988 19.52997782752853 27.157066094203575 29 31.657770978475547 18.722661487238696 19.005588772713654 30.613978761572103 30 29.707873889956627 18.20366398210271 20.795354623095275 31.293107504845384 31 27.964087411255168 18.47403065320948 20.824207895795432 32.73767403973993 32 29.131678754506297 22.232250553795495 19.585287309118122 29.050783382580086 33 32.15203078508486 21.691096803467467 18.97292232465921 27.18395008678846 34 30.36522991824759 20.519271876747553 21.23469585390567 27.880802351099188 35 32.681103333806846 20.885410466568928 20.195786271595146 26.23769992802908 36 35.83316111351801 19.83121130493646 19.229599917511504 25.106027664034023 37 35.20704067057602 19.734805086259634 19.85704058944463 25.20111365371972 38 31.63785690989415 21.911221017101465 23.423333122391718 23.027588950612667 39 31.210080590022876 23.4857969175087 22.918268089681753 22.38585440278667 40 31.200499710360933 25.52858944816936 19.28482089212962 23.986089949340084 41 31.93411924573769 24.48407442433222 18.536199425088213 25.045606904841875 42 32.91929772078322 23.784832471791724 18.104919704262805 25.19095010316225 43 32.8574608500475 21.97220969602723 18.676305960929778 26.494023492995485 44 31.028154510160377 22.174425999099885 19.666662093806476 27.130757396933262 45 28.65890401522202 22.967227196068166 20.167065759352198 28.206803029357612 46 28.67029928779915 21.259514683822857 20.689905942166302 29.38028008621169 47 28.381228143387784 19.2167221531622 22.014715169077082 30.387334534372933 48 29.955870424023622 18.412813331274073 20.902920095758642 30.72839614894366 49 30.59629211843944 19.414350844880175 21.51073434676766 28.47862268991273 50 29.525859303122658 21.444877784410885 20.605824319267068 28.42343859319939 51 28.074167957024553 21.77784101109184 21.40562494256266 28.742366089320942 52 29.177953149424695 21.265422524168674 22.31912014629612 27.237504180110506 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 1.0 2 2.0 3 6.5 4 11.0 5 35.5 6 60.0 7 352.0 8 644.0 9 1373.5 10 2103.0 11 3266.0 12 4429.0 13 5657.0 14 7869.5 15 8854.0 16 10726.5 17 12599.0 18 16363.5 19 20128.0 20 26576.0 21 33024.0 22 40710.5 23 48397.0 24 57299.5 25 66202.0 26 68955.5 27 71709.0 28 75194.0 29 78679.0 30 80974.0 31 83269.0 32 91898.0 33 100527.0 34 112541.0 35 124555.0 36 135004.5 37 145454.0 38 164037.5 39 213269.0 40 243917.0 41 286492.5 42 329068.0 43 377040.0 44 425012.0 45 475492.0 46 525972.0 47 562900.0 48 599828.0 49 656538.0 50 713248.0 51 799524.5 52 885801.0 53 996453.0 54 1107105.0 55 1219292.5 56 1331480.0 57 1356665.0 58 1381850.0 59 1315418.5 60 1248987.0 61 1156684.5 62 1064382.0 63 935719.0 64 704866.5 65 602677.0 66 551752.0 67 500827.0 68 420856.0 69 340885.0 70 284805.5 71 228726.0 72 174776.0 73 120826.0 74 92636.0 75 64446.0 76 46898.5 77 29351.0 78 20626.5 79 11902.0 80 7636.0 81 3370.0 82 2295.0 83 1220.0 84 673.5 85 127.0 86 77.0 87 27.0 88 19.5 89 6.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1.3558254E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 6.998145863267606 #Duplication Level Percentage of deduplicated Percentage of total 1 72.88290814490888 5.100452221372069 2 8.453259913718657 1.1831429179263222 3 4.080496441522302 0.8566772787695246 4 2.4991152196159336 0.6995669134393744 5 1.661230183265144 0.5812765567476127 6 1.1003770739975063 0.46203595610580966 7 0.7485984363627936 0.3667160735476617 8 0.5357245658586004 0.2999262923531359 9 0.37513614256122035 0.23627316998042738 >10 2.5582585590356293 3.7679284457285585 >50 0.959519223791029 5.037219175253038 >100 3.740314214389115 61.04801387208983 >500 0.36533940680528604 16.715308327032616 >1k 0.0397224741680732 3.645462799654192 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0022274254487340333 0.0 0.0 0.0 0.0 12 0.00543580316462577 0.0 0.0 0.0 0.0 13 0.013475186406745294 0.0 0.0 0.0 0.0 14 0.038264514000106505 0.0 0.0 0.0 0.0 15 0.06152709633556061 0.0 0.0 0.0 0.0 16 0.07832866975349481 0.0 0.0 0.0 0.0 17 0.09170059802685508 0.0 0.0 0.0 0.0 18 0.10718194245365222 0.0 0.0 0.0 0.0 19 0.12034735446024244 0.0 0.0 0.0 0.0 20 0.13450846989590254 0.0 0.0 0.0 0.0 21 0.14838193767427577 0.0 0.0 0.0 0.0 22 0.16443857741564658 0.0 0.0 0.0 0.0 23 0.18228748332934314 0.0 0.0 0.0 0.0 24 0.20267358909192879 0.0 0.0 0.0 0.0 25 0.22242539489229218 0.0 0.0 0.0 0.0 26 0.24520118888464548 0.0 0.0 0.0 0.0 27 0.26942259674438906 0.0 0.0 0.0 0.0 28 0.2944036894426082 0.0 0.0 0.0 0.0 29 0.320269851855556 0.0 0.0 0.0 0.0 30 0.34852570249827153 0.0 0.0 0.0 0.0 31 0.3749376579019688 0.0 0.0 0.0 0.0 32 0.39883454019964515 0.0 0.0 0.0 0.0 33 0.41868960413339357 0.0 0.0 0.0 0.0 34 0.4368114065424648 0.0 0.0 0.0 0.0 35 0.45376786716047657 0.0 0.0 0.0 0.0 36 0.46933771855874656 0.0 0.0 0.0 0.0 37 0.4847010536902465 0.0 0.0 0.0 0.0 38 0.502033668937018 0.0 0.0 0.0 0.0 39 0.5252593733676917 0.0 0.0 0.0 0.0 40 0.5581470888508211 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGCTA 40 5.6188583E-9 46.000004 23 ATGGGGC 235330 0.0 43.973953 9 CAACTTA 74070 0.0 43.754963 3 ATATCGC 100 0.0 43.699997 42 AACTTAT 312735 0.0 43.626713 4 TATGGGC 119635 0.0 43.61993 8 CACTTAT 331585 0.0 43.61666 4 TATGGGG 937415 0.0 43.592327 8 ATGGGAC 43520 0.0 43.58479 9 TCACTTA 118930 0.0 43.482048 3 ACACTTA 79645 0.0 43.429844 3 TTATGGG 1406665 0.0 43.39958 7 ACTTATG 1433085 0.0 43.396324 5 CTTATGG 1428475 0.0 43.390175 6 GCACTTA 85190 0.0 43.32175 3 TAACTTA 112635 0.0 43.284145 3 ATGGGAG 110325 0.0 43.246044 9 GACTTAT 304880 0.0 43.23891 4 ATGGGCT 50995 0.0 43.221687 9 AAACTTA 72065 0.0 43.216957 3 >>END_MODULE