##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527971_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 13441530 Sequences flagged as poor quality 0 Sequence length 52 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.897034042999568 33.0 31.0 34.0 30.0 34.0 2 32.26892429656446 34.0 31.0 34.0 30.0 34.0 3 32.475966128855866 34.0 31.0 34.0 30.0 34.0 4 35.992036174453354 37.0 35.0 37.0 35.0 37.0 5 35.951278463091626 37.0 35.0 37.0 35.0 37.0 6 36.11504560864723 37.0 36.0 37.0 35.0 37.0 7 36.31166511550396 37.0 37.0 37.0 35.0 37.0 8 36.21271603753442 37.0 37.0 37.0 35.0 37.0 9 37.674182700927645 39.0 38.0 39.0 35.0 39.0 10 38.041519975776566 39.0 39.0 39.0 35.0 39.0 11 38.19321795956264 39.0 39.0 39.0 37.0 39.0 12 38.09555251522706 39.0 39.0 39.0 37.0 39.0 13 38.12093764623521 39.0 39.0 39.0 37.0 39.0 14 38.8356958620038 40.0 39.0 40.0 36.0 40.0 15 38.27772411325199 40.0 38.0 40.0 35.0 40.0 16 37.5317513705657 40.0 36.0 40.0 33.0 40.0 17 37.463605408015304 40.0 36.0 40.0 33.0 40.0 18 37.489813659605716 40.0 36.0 40.0 33.0 40.0 19 37.616505487098564 40.0 37.0 40.0 33.0 40.0 20 37.61916493137314 40.0 36.0 40.0 33.0 40.0 21 37.57907708423074 40.0 36.0 40.0 33.0 40.0 22 37.54577313743302 40.0 36.0 40.0 33.0 40.0 23 37.473102987531924 40.0 36.0 40.0 33.0 40.0 24 37.4495602063158 40.0 36.0 40.0 33.0 40.0 25 37.40720758723151 40.0 36.0 40.0 33.0 40.0 26 37.39025743349158 40.0 36.0 40.0 33.0 40.0 27 37.42268670307621 40.0 36.0 40.0 33.0 40.0 28 37.24617108320258 40.0 35.0 40.0 33.0 40.0 29 37.33753739343661 40.0 35.0 40.0 33.0 40.0 30 37.353662120309224 40.0 35.0 40.0 33.0 40.0 31 37.344960655520616 40.0 35.0 40.0 33.0 40.0 32 37.27961184478255 40.0 35.0 40.0 33.0 40.0 33 37.20233954021603 40.0 35.0 40.0 33.0 40.0 34 37.11910370322426 40.0 35.0 40.0 33.0 40.0 35 36.9519387301892 40.0 35.0 40.0 32.0 40.0 36 36.50158545939339 39.0 35.0 40.0 31.0 40.0 37 36.5838670151389 39.0 35.0 40.0 31.0 40.0 38 36.46443239720478 39.0 35.0 40.0 31.0 40.0 39 36.372320487325474 39.0 35.0 40.0 31.0 40.0 40 36.27963885063679 39.0 35.0 40.0 31.0 40.0 41 36.16001720042287 38.0 35.0 40.0 31.0 40.0 42 35.855240065677044 38.0 35.0 40.0 30.0 40.0 43 35.68650019752216 38.0 35.0 40.0 30.0 40.0 44 35.52520196733556 37.0 35.0 40.0 30.0 40.0 45 35.122353854062744 37.0 34.0 40.0 28.0 40.0 46 35.143595483549866 37.0 34.0 40.0 28.0 40.0 47 35.05739309438732 36.0 34.0 40.0 28.0 40.0 48 34.91321121925852 36.0 34.0 40.0 28.0 40.0 49 34.75902624180432 36.0 34.0 40.0 28.0 40.0 50 34.54136753777286 35.0 34.0 39.0 27.0 40.0 51 34.455354263986315 35.0 34.0 39.0 27.0 40.0 52 33.948542539428175 35.0 33.0 39.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 9.0 13 17.0 14 31.0 15 73.0 16 225.0 17 632.0 18 1625.0 19 3474.0 20 6678.0 21 12070.0 22 19754.0 23 30854.0 24 45259.0 25 64455.0 26 88737.0 27 119245.0 28 157218.0 29 201919.0 30 255211.0 31 312026.0 32 378937.0 33 481377.0 34 737003.0 35 1484753.0 36 1123732.0 37 2112776.0 38 3818791.0 39 1984649.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.555360141293438 20.470139931986907 34.953401882077415 17.021098044642237 2 21.448748765951496 22.169857151678418 36.69614247782805 19.685251604542042 3 21.89370555286489 21.31752114528629 37.340600363202704 19.44817293864612 4 21.144683678122952 21.961517773646303 33.77006189027588 23.12373665795486 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 0.0 0.0 100.0 0.0 8 0.0 0.0 100.0 0.0 9 0.0 100.0 0.0 0.0 10 0.0 0.0 100.0 0.0 11 99.70071859379104 0.2266185471445587 0.05837877086909005 0.01428408819531705 12 99.62391186122413 0.268511099554887 0.06046930669350885 0.04710773252747269 13 98.4489042542032 0.8551853844019245 0.21138962603215555 0.48452073536271545 14 66.41165849423392 19.489671190705224 5.451529699372021 8.647140615688839 15 37.85699247035122 24.45775890095845 15.18451396530008 22.500734663390254 16 31.804816862366113 17.034995272115598 24.966919688458084 26.193268177060204 17 24.43875808780697 16.608399490236604 28.026921042470608 30.925921379485814 18 23.357958506211716 17.63592388664088 31.59841922757305 27.407698379574345 19 26.450158575697856 17.369912502520172 28.194870673204615 27.985058248577353 20 30.278502521662343 17.29615601795331 24.56991131217949 27.855430148204857 21 31.694874021037784 18.348662689440857 21.35967408472101 28.59678920480035 22 31.63341524365158 19.53941255199371 21.836375769722643 26.99079643463207 23 29.99772347344387 21.020538584521255 20.782656438664347 28.199081503370525 24 30.31213708558475 23.019849674851002 19.641923203682914 27.026090035881335 25 31.119366619722605 20.93553338050058 22.39459347261807 25.55050652715874 26 30.51081982482649 20.074396292683943 21.899248076669846 27.515535805819724 27 32.131446345765696 20.095204935747642 20.97325974052061 26.800088977966052 28 33.45064140763738 19.966774615687353 19.56201414571109 27.02056983096418 29 31.651381948334752 18.71784685225566 19.009748146230375 30.621023053179215 30 29.691597608307983 18.205658135643784 20.785855479249758 31.316888776798475 31 27.99156048455793 18.462816360935104 20.815480082996505 32.73014307151046 32 29.118463448729422 22.25315124096736 19.57873843230644 29.049646877996775 33 32.12703464560954 21.72805476757482 18.956004264395496 27.18890632242014 34 30.337320230658264 20.523310962368125 21.232143959802194 27.907224847171413 35 32.693220191451424 20.92627104206143 20.189353444139172 26.191155322347974 36 35.88855584148531 19.802329050338763 19.2960697182538 25.013045389922127 37 35.19603051140756 19.751300633186847 19.83425249952944 25.218416355876155 38 31.61149065619762 21.917646279850583 23.42772734949072 23.043135714461076 39 31.17609379289411 23.53188215924824 22.946167586576827 22.34585646128082 40 31.198286207001736 25.547783622846502 19.271496622780294 23.982433547371468 41 31.926841661626316 24.474081447573305 18.53811284876052 25.060964042039856 42 32.97850765500653 23.797238855993328 18.149727002804 25.07452648619614 43 32.81283455082866 22.020551231891012 18.701137444918846 26.46547677236148 44 31.27596337619304 22.094396992009095 19.595693347409114 27.033946284388755 45 28.668953608703774 23.044259098480605 20.200974145056403 28.085813147759218 46 28.711813312918988 21.326485898554704 20.68605285261425 29.27564793591206 47 28.372774527899725 19.20155666802812 21.990718318524753 30.4349504855474 48 29.973105740194754 18.425075121656537 20.961594401827767 30.640224736320942 49 30.657053177726045 19.37946052272323 21.512610543591393 28.45087575595933 50 29.648447758551296 21.41221274661441 20.655728923716275 28.283610571118018 51 28.08683237696899 21.8110587113223 21.380430650379832 28.721678261328883 52 29.200344008457368 21.231995167216827 22.302029605260714 27.26563121906509 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 1.5 2 3.0 3 5.5 4 8.0 5 32.5 6 57.0 7 367.0 8 677.0 9 1402.0 10 2127.0 11 3178.5 12 4230.0 13 5526.5 14 7809.5 15 8796.0 16 10700.5 17 12605.0 18 16142.0 19 19679.0 20 26146.0 21 32613.0 22 40172.5 23 47732.0 24 56535.0 25 65338.0 26 68058.0 27 70778.0 28 74807.0 29 78836.0 30 80870.5 31 82905.0 32 91363.0 33 99821.0 34 112192.5 35 124564.0 36 134753.0 37 144942.0 38 162847.5 39 211407.5 40 242062.0 41 283812.5 42 325563.0 43 373798.5 44 422034.0 45 471504.5 46 520975.0 47 558852.0 48 596729.0 49 653393.0 50 710057.0 51 796223.0 52 882389.0 53 990691.5 54 1098994.0 55 1208201.5 56 1317409.0 57 1342490.5 58 1367572.0 59 1302132.0 60 1236692.0 61 1145402.5 62 1054113.0 63 926671.0 64 698087.5 65 596946.0 66 545143.5 67 493341.0 68 415765.5 69 338190.0 70 282801.0 71 227412.0 72 173222.0 73 119032.0 74 91540.0 75 64048.0 76 46618.5 77 29189.0 78 20394.5 79 11600.0 80 7471.0 81 3342.0 82 2263.5 83 1185.0 84 646.0 85 107.0 86 67.0 87 27.0 88 16.5 89 3.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1.344153E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.319956753573381 #Duplication Level Percentage of deduplicated Percentage of total 1 72.59885407232237 5.314204721683845 2 8.666422636830028 1.2687567781957036 3 4.126995506441638 0.906282858880334 4 2.596503013867197 0.7602515908812332 5 1.673074726635735 0.6123417322235093 6 1.0878607648536391 0.47778562515827405 7 0.6893665328089206 0.35322932452654876 8 0.5395978257809176 0.3159866199230833 9 0.3801708306926692 0.2504550635676366 >10 2.598136796377116 4.000910335016469 >50 1.0018187051898453 5.52401957191263 >100 3.6821232630805683 61.58484592394138 >500 0.32604338862220955 15.471181208126152 >1k 0.03303193649713376 3.1597486459633615 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0019863810146612776 0.0 0.0 0.0 0.0 12 0.0052895764098283456 0.0 0.0 0.0 0.0 13 0.01312350602944754 0.0 0.0 0.0 0.0 14 0.03792723001027413 0.0 0.0 0.0 0.0 15 0.062277136605728665 0.0 0.0 0.0 0.0 16 0.07967842946450293 0.0 0.0 0.0 0.0 17 0.09366493248908421 0.0 0.0 0.0 0.0 18 0.10891617248929251 0.0 0.0 0.0 0.0 19 0.1226199696016748 0.0 0.0 0.0 0.0 20 0.1373801940701691 0.0 0.0 0.0 0.0 21 0.15176843707524368 0.0 0.0 0.0 0.0 22 0.16740653779740847 0.0 0.0 0.0 0.0 23 0.1862957565098616 0.0 0.0 0.0 0.0 24 0.20630091961257388 0.0 0.0 0.0 0.0 25 0.22722859674456702 0.0 0.0 0.0 0.0 26 0.24939125233511364 0.0 0.0 0.0 0.0 27 0.2726698523159194 0.0 0.0 0.0 0.0 28 0.29599309007233554 0.0 0.0 0.0 0.0 29 0.32050666851169474 0.0 0.0 0.0 0.0 30 0.34861358788768837 0.0 0.0 0.0 0.0 31 0.37481596217097307 0.0 0.0 0.0 0.0 32 0.39812432066885245 0.0 0.0 0.0 0.0 33 0.4172144093715522 0.0 0.0 0.0 0.0 34 0.4341470055864176 0.0 0.0 0.0 0.0 35 0.4497255892744353 0.0 0.0 0.0 0.0 36 0.4647313215087866 0.0 0.0 0.0 0.0 37 0.47952874412362284 0.0 0.0 0.0 0.0 38 0.49703419179215463 0.0 0.0 0.0 0.0 39 0.5197845780949044 0.0 0.0 0.0 0.0 40 0.5505176866026412 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGGGGC 232115 0.0 43.93499 9 CAACTTA 73050 0.0 43.572483 3 CACTTAT 327800 0.0 43.537216 4 AACTTAT 310930 0.0 43.533787 4 TATGGGG 928235 0.0 43.50632 8 TATGGGC 118535 0.0 43.479477 8 ATGGGAC 44060 0.0 43.426464 9 ACACTTA 79465 0.0 43.41534 3 TCACTTA 117965 0.0 43.39321 3 ATGGGAG 109170 0.0 43.383347 9 ACTTATG 1422305 0.0 43.349422 5 CTTATGG 1418035 0.0 43.338844 6 TTATGGG 1396540 0.0 43.33774 7 AAACTTA 71145 0.0 43.326443 3 GCACTTA 84070 0.0 43.272392 3 TAACTTA 112430 0.0 43.232143 3 ATGGGGG 378035 0.0 43.154472 9 GACTTAT 304300 0.0 43.119522 4 TACACTT 28380 0.0 43.11487 2 TACTTAT 484925 0.0 43.103924 4 >>END_MODULE