##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527970_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 13720150 Sequences flagged as poor quality 0 Sequence length 59 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.525511310007545 31.0 31.0 34.0 30.0 34.0 2 32.004137418322685 33.0 31.0 34.0 30.0 34.0 3 32.20242628542691 34.0 31.0 34.0 30.0 34.0 4 35.80544432823256 37.0 35.0 37.0 35.0 37.0 5 35.59047342776865 37.0 35.0 37.0 33.0 37.0 6 35.864151412338785 37.0 35.0 37.0 35.0 37.0 7 36.072067725207084 37.0 35.0 37.0 35.0 37.0 8 36.013217056664836 37.0 35.0 37.0 35.0 37.0 9 37.36726515380663 39.0 37.0 39.0 34.0 39.0 10 37.77437149010762 39.0 37.0 39.0 35.0 39.0 11 37.93991486973539 39.0 37.0 39.0 35.0 39.0 12 37.867538547319086 39.0 37.0 39.0 35.0 39.0 13 37.86082761485844 39.0 38.0 39.0 35.0 39.0 14 38.330301417987414 40.0 38.0 40.0 35.0 40.0 15 37.759999781343495 40.0 38.0 40.0 33.0 40.0 16 37.03447178055634 39.0 35.0 40.0 32.0 40.0 17 36.87847035200053 39.0 35.0 40.0 32.0 40.0 18 36.84967671636243 39.0 35.0 40.0 31.0 40.0 19 36.95302026581342 39.0 35.0 40.0 32.0 40.0 20 37.048455301144664 39.0 35.0 40.0 32.0 40.0 21 36.97167472658827 39.0 35.0 40.0 31.0 40.0 22 36.94793570041144 39.0 35.0 40.0 31.0 40.0 23 36.89871444554178 39.0 35.0 40.0 31.0 40.0 24 36.86377510449959 39.0 35.0 40.0 31.0 40.0 25 36.81350356956739 39.0 35.0 40.0 31.0 40.0 26 36.66721872574279 39.0 35.0 40.0 31.0 40.0 27 36.57989438890974 39.0 35.0 40.0 31.0 40.0 28 36.5670655933062 39.0 35.0 40.0 31.0 40.0 29 36.51706344318393 39.0 35.0 40.0 31.0 40.0 30 36.47700579075302 39.0 35.0 40.0 30.0 40.0 31 36.46654504506146 39.0 35.0 40.0 31.0 40.0 32 36.3378679533387 39.0 35.0 40.0 30.0 40.0 33 36.18664263874666 38.0 35.0 40.0 30.0 40.0 34 36.08076092462546 38.0 35.0 40.0 30.0 40.0 35 35.93003728093352 38.0 35.0 40.0 30.0 40.0 36 35.74874830085677 38.0 35.0 40.0 29.0 40.0 37 35.59416391220213 38.0 34.0 40.0 29.0 40.0 38 35.32219086526022 38.0 34.0 40.0 27.0 40.0 39 35.16369893915154 38.0 34.0 40.0 27.0 40.0 40 35.03370225544182 37.0 34.0 40.0 27.0 40.0 41 34.90746128868854 37.0 34.0 40.0 26.0 40.0 42 34.78282190792375 37.0 34.0 40.0 26.0 40.0 43 34.56682397787196 37.0 33.0 40.0 26.0 40.0 44 34.40290798569986 36.0 33.0 40.0 25.0 40.0 45 34.177987704216065 36.0 33.0 40.0 24.0 40.0 46 34.00262110836981 35.0 33.0 39.0 24.0 40.0 47 33.85575339919753 35.0 33.0 39.0 24.0 40.0 48 33.67558904239385 35.0 33.0 39.0 23.0 40.0 49 33.550626268663244 35.0 33.0 39.0 24.0 40.0 50 33.346120268364416 35.0 33.0 39.0 23.0 40.0 51 33.15754536211339 35.0 32.0 38.0 23.0 40.0 52 32.9710108854495 35.0 32.0 38.0 23.0 40.0 53 32.762723658269046 35.0 32.0 38.0 23.0 40.0 54 32.59818726471649 35.0 31.0 37.0 22.0 40.0 55 32.46333691687044 35.0 31.0 37.0 22.0 40.0 56 32.25583612424062 35.0 31.0 37.0 21.0 39.0 57 32.094767622802955 35.0 31.0 36.0 21.0 39.0 58 31.910542668994143 35.0 31.0 36.0 20.0 39.0 59 31.37916699161452 34.0 30.0 35.0 20.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 5.0 13 20.0 14 77.0 15 270.0 16 1138.0 17 3290.0 18 7667.0 19 14811.0 20 25094.0 21 39854.0 22 58118.0 23 81050.0 24 108254.0 25 142535.0 26 180581.0 27 225224.0 28 270994.0 29 313896.0 30 367973.0 31 444384.0 32 547114.0 33 700535.0 34 1035538.0 35 1542225.0 36 1542758.0 37 2373889.0 38 3022485.0 39 670369.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.61205963491653 20.76500621348892 34.46187541681396 17.161058734780596 2 21.00077623058057 22.619913047597876 36.60524119634261 19.77406952547895 3 21.89991363068188 21.513430975608866 37.06994457057685 19.5167108231324 4 21.219556637500318 22.127542337365117 33.497629399095494 23.155271626039074 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 0.0 0.0 100.0 0.0 8 0.0 0.0 100.0 0.0 9 0.0 100.0 0.0 0.0 10 0.0 0.0 100.0 0.0 11 99.69641002467175 0.23591578809269578 0.05064084576334807 0.017033341472214227 12 99.62308721114566 0.2723439612540679 0.05110731296669497 0.053461514633586366 13 98.42764838576838 0.8723811328593347 0.2039263419131715 0.49604413945911674 14 66.17674005021811 19.641731322179425 5.504728446846427 8.676800180756041 15 37.84985586892272 24.593309839907 15.192377634355308 22.364456656814976 16 31.90944705415028 17.10371971151919 24.876236775837 26.11059645849353 17 24.45659121802604 16.680429878682084 27.900635197137056 30.962343706154815 18 23.28653112393086 17.753552257081736 31.55445822385324 27.405458395134165 19 26.49352958969107 17.452928721624765 28.213022452378432 27.840519236305727 20 30.382838380046866 17.380575285255627 24.54292409339548 27.693662241302025 21 31.677693028137448 18.459397309796174 21.452075961268648 28.41083370079773 22 31.604341060411144 19.69195672058979 21.87323753749048 26.830464681508587 23 29.958229319650297 21.20113847151817 20.81047218871514 28.030160020116394 24 30.29372127855745 23.20612383975394 19.62359012109926 26.87656476058935 25 31.024580635051368 21.09847195548154 22.454251593459254 25.42269581600784 26 30.41499546287759 20.16909436121325 22.036807177764093 27.379102998145065 27 32.094845901830524 20.203700396861553 21.051387922143707 26.650065779164223 28 33.380043221101815 20.032936957686324 19.58183401784966 27.00518580336221 29 31.6051428009169 18.809225846656197 19.040513405465685 30.54511794696122 30 29.579705761234386 18.314165661454137 20.89236633710273 31.21376224020874 31 27.805133325801833 18.60127622511416 20.902286053723902 32.69130439536011 32 28.972095786124786 22.474076449601498 19.57806583747262 28.97576192680109 33 32.11770279479452 21.899170198576545 18.972321731176407 27.010805275452526 34 30.314763322558424 20.655160475650778 21.301443497337857 27.728632704452938 35 32.647041030892524 20.991745717065776 20.223911546156565 26.13730170588514 36 35.86309187581768 19.896998210660964 19.307974038184714 24.931935875336638 37 35.20320113118297 19.861481106256125 19.849761117772037 25.08555664478887 38 31.512344981651076 22.070983188959303 23.548612806711297 22.868059022678324 39 31.031490180500942 23.73949264403086 22.968269297347334 22.260747878120863 40 31.045892355404277 25.876867235416523 19.25312041049114 23.82411999868806 41 31.84726843365415 24.73818434929647 18.49389401719369 24.920653199855686 42 32.817155789113094 24.032645415684232 18.092703068115146 25.05749572708753 43 32.775807844666424 22.1690870726632 18.68897934789343 26.36612573477695 44 30.96315273521062 22.263291582089117 19.65840023614902 27.115155446551242 45 28.472844684642663 23.22833205176328 20.13143442309304 28.16738884050102 46 28.553142640568797 21.450042455804056 20.675160256994275 29.321654646632872 47 28.256433056489904 19.355604712776465 21.967179659114514 30.420782571619114 48 29.85752342357773 18.531320721712227 20.88951651403228 30.721639340677765 49 30.5639296946462 19.576323874010125 21.451850016217026 28.407896415126654 50 29.427586433092934 21.65864075830075 20.550154335047356 28.36361847355896 51 27.924665546659476 21.972675225853944 21.412630328385625 28.690028899100955 52 29.043939023990262 21.432863343330794 22.38463136335973 27.138566269319213 53 29.718778584782235 21.12693374343575 21.719048261134173 27.435239410647842 54 28.104167957347403 20.67416172563711 22.372401176371977 28.849269140643507 55 27.167654872577923 21.461441748085843 22.9294359026687 28.44146747666753 56 26.949741803114396 21.236626421722796 23.377812924785808 28.435818850376997 57 27.034573237173063 20.321716599308317 24.68693126532873 27.95677889818989 58 27.332142870158126 20.32346585132087 24.290762127236217 28.053629151284788 59 27.120169968987216 20.017703888077026 22.782965200817777 30.079160942117976 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 2.0 4 20.0 5 36.0 6 256.5 7 477.0 8 970.5 9 2115.5 10 2767.0 11 3536.5 12 4306.0 13 4306.0 14 4725.5 15 5145.0 16 5903.5 17 6662.0 18 8640.5 19 13776.0 20 16933.0 21 22637.5 22 28342.0 23 34781.5 24 41221.0 25 48226.5 26 62328.0 27 69424.0 28 74744.0 29 80064.0 30 86719.0 31 98262.0 32 103150.0 33 112304.5 34 121459.0 35 131610.5 36 146027.5 37 150293.0 38 170787.0 39 191281.0 40 217230.5 41 243180.0 42 263829.5 43 311508.5 44 338538.0 45 362642.5 46 386747.0 47 427612.5 48 518005.0 49 567532.0 50 616969.5 51 666407.0 52 776057.5 53 985528.5 54 1085349.0 55 1172556.0 56 1259763.0 57 1252235.0 58 1158383.0 59 1072059.0 60 1017453.0 61 962847.0 62 886367.5 63 809888.0 64 711551.0 65 555353.5 66 497493.0 67 459213.0 68 420933.0 69 376861.0 70 271456.5 71 210124.0 72 163266.0 73 116408.0 74 89706.0 75 49014.5 76 35025.0 77 26348.5 78 17672.0 79 11698.5 80 5725.0 81 4003.0 82 1578.0 83 875.0 84 613.5 85 352.0 86 282.0 87 126.0 88 40.0 89 20.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 1.372015E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.369348162788143 #Duplication Level Percentage of deduplicated Percentage of total 1 79.93785431052645 9.0884129704261 2 7.300966783891086 1.6601446658201873 3 3.262224771173027 1.1126810762621409 4 1.8789517132029545 0.8544982483388659 5 1.1730036782091824 0.666814360689565 6 0.6952342402968569 0.47426160795758876 7 0.48491575842861445 0.385922326103817 8 0.3388280026336933 0.30818028233956457 9 0.25194717146036805 0.25780275998663443 >10 1.5938094443324053 3.7729432791480604 >50 0.6024634994391577 5.15523442358429 >100 2.25916275713978 58.5646189507136 >500 0.20137533994645027 14.857712090302048 >1k 0.0192625293201104 2.8407729583276424 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.001997062714328925 0.0 0.0 0.0 0.0 12 0.0051967361872865825 0.0 0.0 0.0 0.0 13 0.013039216043556375 0.0 0.0 0.0 0.0 14 0.03781299767130826 0.0 0.0 0.0 0.0 15 0.05947456842673003 0.0 0.0 0.0 0.0 16 0.07606330834575424 0.0 0.0 0.0 0.0 17 0.0891171014894152 0.0 0.0 0.0 0.0 18 0.10350469929264622 0.0 0.0 0.0 0.0 19 0.11596811988207126 0.0 0.0 0.0 0.0 20 0.12987467338185077 0.0 0.0 0.0 0.0 21 0.1433001825781788 0.0 0.0 0.0 0.0 22 0.15802305368381542 0.0 0.0 0.0 0.0 23 0.17445144550168912 0.0 0.0 0.0 0.0 24 0.19351100388844145 0.0 0.0 0.0 0.0 25 0.21327755163026643 0.0 0.0 0.0 0.0 26 0.23411551622977883 0.0 0.0 0.0 0.0 27 0.25523044573127845 0.0 0.0 0.0 0.0 28 0.2781237814455381 0.0 0.0 0.0 0.0 29 0.3016730866645044 0.0 0.0 0.0 0.0 30 0.328932263860089 0.0 0.0 0.0 0.0 31 0.3543109951421814 0.0 0.0 0.0 7.2885500522953465E-6 32 0.37636614760042714 0.0 0.0 0.0 7.2885500522953465E-6 33 0.39554232278801615 0.0 0.0 0.0 7.2885500522953465E-6 34 0.41142407335196773 0.0 0.0 0.0 7.2885500522953465E-6 35 0.42686851091278155 0.0 0.0 0.0 7.2885500522953465E-6 36 0.44147476521758144 0.0 0.0 0.0 7.2885500522953465E-6 37 0.45570201491966195 0.0 0.0 0.0 7.2885500522953465E-6 38 0.47258229684077796 0.0 0.0 0.0 7.2885500522953465E-6 39 0.49390130574374186 0.0 0.0 0.0 7.2885500522953465E-6 40 0.5258688862731092 0.0 0.0 0.0 7.2885500522953465E-6 41 0.5522534374624184 0.0 0.0 0.0 7.2885500522953465E-6 42 0.5722094875056031 0.0 0.0 0.0 7.2885500522953465E-6 43 0.5905329023370736 0.0 0.0 0.0 7.2885500522953465E-6 44 0.6080327110126347 0.0 0.0 0.0 7.2885500522953465E-6 45 0.6263925685943666 0.0 0.0 0.0 1.4577100104590693E-5 46 0.6447159834258371 0.0 0.0 0.0 1.4577100104590693E-5 47 0.6610350469929265 0.0 0.0 0.0 1.4577100104590693E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGGGGC 236230 0.0 50.524216 9 AACTTAT 320875 0.0 50.164803 4 TATGGGG 948105 0.0 50.104885 8 CACTTAT 336085 0.0 50.09205 4 CAACTTA 75615 0.0 50.024597 3 ACACTTA 81475 0.0 49.93937 3 TATGGGC 121515 0.0 49.91853 8 TTATGGG 1426085 0.0 49.8882 7 ACTTATG 1453865 0.0 49.864178 5 CTTATGG 1448930 0.0 49.858074 6 ATGGGAC 43750 0.0 49.84423 9 AAACTTA 73125 0.0 49.836308 3 TCACTTA 120820 0.0 49.7363 3 TAACTTA 117480 0.0 49.731487 3 GACTTAT 309505 0.0 49.68391 4 ATGGGAG 110190 0.0 49.66435 9 GCACTTA 86470 0.0 49.63195 3 ATGGGGG 389305 0.0 49.603985 9 TACTTAT 493415 0.0 49.466595 4 CTACTTA 101650 0.0 49.444073 3 >>END_MODULE