##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527969_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1964004 Sequences flagged as poor quality 0 Sequence length 52 %GC 59 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.937809698961917 33.0 31.0 34.0 30.0 34.0 2 32.378629065928585 34.0 31.0 34.0 30.0 34.0 3 32.40442687489435 34.0 31.0 34.0 30.0 34.0 4 36.057806908743565 37.0 35.0 37.0 35.0 37.0 5 36.08952120260447 37.0 35.0 37.0 35.0 37.0 6 36.10695242983212 37.0 36.0 37.0 35.0 37.0 7 36.03348771183765 37.0 35.0 37.0 35.0 37.0 8 35.836271718387536 37.0 35.0 37.0 33.0 37.0 9 37.33368465644673 39.0 37.0 39.0 34.0 39.0 10 37.34558840002362 39.0 37.0 39.0 34.0 39.0 11 37.89560102728915 39.0 37.0 39.0 35.0 39.0 12 38.02387418762895 39.0 38.0 39.0 37.0 39.0 13 38.069632750238796 39.0 39.0 39.0 37.0 39.0 14 38.739765295793696 40.0 39.0 40.0 36.0 40.0 15 38.07076309416885 40.0 38.0 40.0 34.0 40.0 16 37.40781637919271 39.0 36.0 40.0 33.0 40.0 17 37.33270960751607 40.0 36.0 40.0 33.0 40.0 18 37.3506769843646 40.0 36.0 40.0 33.0 40.0 19 37.44693035248401 40.0 37.0 40.0 33.0 40.0 20 37.521380302687774 40.0 37.0 40.0 33.0 40.0 21 37.346929537821715 40.0 36.0 40.0 33.0 40.0 22 37.38324056366484 40.0 36.0 40.0 32.0 40.0 23 37.33119484481702 40.0 36.0 40.0 32.0 40.0 24 37.3088303282478 40.0 36.0 40.0 32.0 40.0 25 37.40903328099128 40.0 36.0 40.0 33.0 40.0 26 37.39292435249623 40.0 36.0 40.0 33.0 40.0 27 37.39606589395948 40.0 36.0 40.0 33.0 40.0 28 37.367154038382814 40.0 36.0 40.0 33.0 40.0 29 37.394413147834726 40.0 36.0 40.0 33.0 40.0 30 37.314512597734016 40.0 36.0 40.0 33.0 40.0 31 37.28179626925403 40.0 35.0 40.0 33.0 40.0 32 37.19577505952126 40.0 35.0 40.0 33.0 40.0 33 37.14170235905833 40.0 35.0 40.0 33.0 40.0 34 37.0422264924104 39.0 35.0 40.0 32.0 40.0 35 36.93191001647654 39.0 35.0 40.0 32.0 40.0 36 36.82631094437689 39.0 35.0 40.0 32.0 40.0 37 36.67963914533779 39.0 35.0 40.0 32.0 40.0 38 36.4694404899379 39.0 35.0 40.0 31.0 40.0 39 36.32899067415341 38.0 35.0 40.0 31.0 40.0 40 36.18112590402056 38.0 35.0 40.0 31.0 40.0 41 35.98650308247845 38.0 35.0 40.0 31.0 40.0 42 35.84061437756746 37.0 35.0 40.0 30.0 40.0 43 35.62320748837579 37.0 35.0 40.0 30.0 40.0 44 35.467491410404456 37.0 35.0 40.0 30.0 40.0 45 35.28800806923 36.0 34.0 40.0 30.0 40.0 46 35.10342494210806 36.0 34.0 40.0 29.0 40.0 47 34.933263883372945 35.0 34.0 39.0 29.0 40.0 48 34.75712320341506 35.0 34.0 39.0 29.0 40.0 49 34.60768358923912 35.0 34.0 39.0 29.0 40.0 50 34.438317844566505 35.0 34.0 39.0 28.0 40.0 51 34.2669739980163 35.0 34.0 38.0 28.0 40.0 52 33.61773652192154 35.0 33.0 37.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 6.0 13 4.0 14 13.0 15 12.0 16 58.0 17 124.0 18 300.0 19 601.0 20 1152.0 21 2035.0 22 3362.0 23 4592.0 24 6645.0 25 9205.0 26 12952.0 27 17362.0 28 22338.0 29 29404.0 30 37197.0 31 46843.0 32 58197.0 33 74020.0 34 109389.0 35 193534.0 36 199400.0 37 360652.0 38 561911.0 39 212692.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.04728503607935 19.298789615499764 30.95966199661508 16.6942633518058 2 35.26963285207159 19.281478041796248 28.246632898914665 17.202256207217502 3 26.796075771739776 20.117321553316593 32.345860802727486 20.740741872216145 4 26.322655147341862 18.312080830792603 35.573247304995306 19.79201671687023 5 0.0 0.0 0.0 100.0 6 0.0 0.0 100.0 0.0 7 0.0 0.0 0.0 100.0 8 100.0 0.0 0.0 0.0 9 0.0 0.0 0.0 100.0 10 0.0 100.0 0.0 0.0 11 99.54434919684482 0.4125246180761343 0.03044800316088969 0.0126781819181631 12 99.57102938690554 0.28559004971476637 0.10239286681697186 0.040987696562736126 13 98.8794829338433 0.729173667670738 0.179225704224635 0.21211769426131513 14 69.25759825336405 21.326280394540948 3.4331905637666726 5.982930788328334 15 34.726915016466364 29.60584601660689 15.488104912209955 20.179134054716794 16 32.33150237983222 15.902258854869949 26.318123588342996 25.448115176954833 17 22.98365991107961 17.951745515793245 29.233850847554283 29.830743725572862 18 23.382997183305125 19.142119873482947 30.448919655968115 27.025963287243815 19 24.831721320323176 20.093289015704652 27.663029199533202 27.411960464438973 20 28.20997309577781 17.84741782603294 26.618784890458468 27.32382418773078 21 30.837004405286343 18.85780273359932 22.501736249009678 27.80345661210466 22 28.66017584485571 20.09023403210991 22.376940169164623 28.87264995386975 23 29.24958401306718 19.045175060743258 23.329229472037735 28.376011454151822 24 30.090570080305334 20.293950521485698 22.18325420925823 27.43222518895074 25 31.003908342345536 18.033873658098457 23.98880043014169 26.97341756941432 26 29.33410522585494 19.47755707218519 23.216042329852687 27.972295372107187 27 30.841281382318975 21.216657399883097 20.78127132123967 27.160789896558256 28 29.738075889865804 21.992368650980342 19.729185887605116 28.540369571548734 29 29.334767138967134 20.5406404467608 21.740077922448222 28.384514491823847 30 29.512516267787642 21.248989309594073 21.513499972505148 27.724994450113137 31 29.098158659554663 19.393697772509626 22.172816348642872 29.335327219292832 32 30.07560066069112 19.392934026610945 22.07200189001652 28.45946342268142 33 28.612416267991307 21.43060808430125 21.57342856735526 28.38354708035218 34 27.52509669023077 21.317930106048664 23.90784336488113 27.24912983883943 35 30.925140681994538 21.481931808692853 19.617118906071475 27.97580860324113 36 31.630994641558775 21.541554905183492 21.096392879036905 25.731057574220827 37 30.739143097468236 22.711104458035727 22.00759265256079 24.54215979193525 38 30.404265979091694 23.160237962855472 21.84791884334248 24.587577214710358 39 30.59265663410054 22.822815024816652 24.01446229233749 22.570066048745318 40 30.634509909348452 23.281113480420608 21.374090887798598 24.71028572243234 41 29.709664542434737 23.907486950128412 20.569510041731075 25.81333846570577 42 30.55732065718807 22.837071614925428 20.43010095702453 26.175506770861972 43 30.809967800472908 21.95881474783147 20.445630456964444 26.78558699473117 44 30.894030765721453 21.866045079337923 19.829287516726033 27.410636638214587 45 28.194698177804117 21.749752037164892 21.12668813301806 28.928861652012927 46 28.848261001505087 22.117470229184867 21.541758570756475 27.492510198553568 47 28.989146661615763 20.374856670353015 24.29058189290857 26.345414775122656 48 28.8527416441107 19.734226610536435 23.0112056798255 28.401826065527363 49 29.12784291681687 20.3785226506667 22.626328663281743 27.867305769234683 50 28.131409100999793 21.550974437933935 22.386308785521823 27.93130767554445 51 28.15264123698322 22.141808265156282 22.4723065737137 27.233243924146795 52 30.103502844189727 21.60199266396606 21.770322260036128 26.52418223180808 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.5 8 1.0 9 5.0 10 9.0 11 21.5 12 34.0 13 42.0 14 99.5 15 149.0 16 242.5 17 336.0 18 492.0 19 648.0 20 786.5 21 925.0 22 1180.5 23 1436.0 24 1733.5 25 2031.0 26 2915.5 27 3800.0 28 4464.5 29 5129.0 30 6812.5 31 8496.0 32 9619.0 33 10742.0 34 11934.5 35 13127.0 36 13467.0 37 13807.0 38 15799.5 39 19168.0 40 20544.0 41 26331.5 42 32119.0 43 33729.5 44 35340.0 45 37112.0 46 38884.0 47 44702.0 48 50520.0 49 53803.0 50 57086.0 51 64910.5 52 72735.0 53 82630.5 54 92526.0 55 103679.5 56 114833.0 57 126143.0 58 137453.0 59 156974.5 60 176496.0 61 183614.0 62 190732.0 63 202856.5 64 196425.0 65 177869.0 66 160681.5 67 143494.0 68 125863.5 69 108233.0 70 93848.0 71 79463.0 72 65583.5 73 51704.0 74 48250.5 75 44797.0 76 34876.5 77 24956.0 78 17971.5 79 10987.0 80 8495.0 81 6003.0 82 4266.0 83 2529.0 84 1767.5 85 1006.0 86 566.5 87 127.0 88 95.0 89 36.5 90 10.0 91 6.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1964004.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 6.995031154125788 #Duplication Level Percentage of deduplicated Percentage of total 1 72.75112357424483 5.088963758994977 2 8.846082961238404 1.2375725181168786 3 4.3452750546752394 0.911860031420968 4 2.5482028914128407 0.7129903444986493 5 1.6647514501875313 0.5822494128968932 6 1.0907773888300034 0.457801309024911 7 0.7681356469344439 0.37611929466307015 8 0.5232979378402454 0.2928388302465837 9 0.38310805960239325 0.24118675310838777 >10 2.641407949438657 3.8906189472139743 >50 0.7566650867744849 3.8958673841235045 >100 3.1616488148445927 55.94157075052183 >500 0.46406846209119806 21.33271815779203 >1k 0.05545472188511171 5.037642507377351 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGACCTCGCAGGGGGGCGTAACCCGAGGCCACCGAAAACCCGAGATGCAGAC 2680 0.13645593389830163 No Hit TGATCTCGCAGGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATC 2467 0.1256107421369814 No Hit CCTACTCGCAGGGGGACTGTAGCGGTGAAGGGCCGGAGGGGGCTCTGCGTTC 2297 0.11695495528522344 No Hit ATGCCTCGCAGGGGGTAACCGCTGGAGGCTTCTGCTGACGGCGTCGGACCTG 2288 0.11649670774601273 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.024388952364659135 0.0 0.0 0.0 0.0 11 0.025610945802554373 0.0 0.0 0.0 0.0 12 0.026629273667467073 0.0 0.0 0.0 0.0 13 0.028513180217555566 0.0 0.0 0.0 0.0 14 0.03711805067606787 0.0 0.0 0.0 0.0 15 0.04903248669554645 0.0 0.0 0.0 0.0 16 0.058706601412217084 0.0 0.0 0.0 0.0 17 0.06563123089362344 0.0 0.0 0.0 0.0 18 0.07581450954275042 0.0 0.0 0.0 0.0 19 0.08808536031494844 0.0 0.0 0.0 0.0 20 0.09770855863837344 0.0 0.0 0.0 0.0 21 0.11018307498355401 0.0 0.0 0.0 0.0 22 0.12250484214899766 0.0 0.0 0.0 0.0 23 0.13518302406716076 0.0 0.0 0.0 0.0 24 0.14613004861497228 0.0 0.0 0.0 0.0 25 0.1595719764318199 0.0 0.0 0.0 0.0 26 0.17973486815709133 0.0 0.0 0.0 0.0 27 0.1971991910403441 0.0 0.0 0.0 0.0 28 0.2142561827776318 0.0 0.0 0.0 0.0 29 0.23599748269351795 0.0 0.0 0.0 0.0 30 0.2613538465298441 0.0 0.0 0.0 0.0 31 0.2847753874228362 0.0 0.0 0.0 0.0 32 0.30509102832784457 0.0 0.0 0.0 0.0 33 0.3188893708974116 0.0 0.0 0.0 0.0 34 0.3341642888711021 0.0 0.0 0.0 0.0 35 0.34964287241777514 0.0 0.0 0.0 0.0 36 0.3643577100657636 0.0 0.0 0.0 0.0 37 0.3785633837812958 0.0 0.0 0.0 0.0 38 0.3956712919118291 0.0 0.0 0.0 0.0 39 0.4123209525031517 0.0 0.0 0.0 0.0 40 0.4331457573406164 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGCT 25 3.4180463E-5 46.0 40 AACGTTA 50 1.6370905E-11 46.0 32 GTCATCG 50 1.6370905E-11 46.0 12 AACCGTG 30 1.8620831E-6 46.0 23 CTAGACG 30 1.8620831E-6 46.0 46 TCTTGTA 25 3.4180463E-5 46.0 24 ATTAGTA 50 1.6370905E-11 46.0 24 GGTAATA 30 1.8620831E-6 46.0 13 ATTAGCC 80 0.0 46.0 17 GGTCGTA 95 0.0 46.0 42 GTATTAG 25 3.4180463E-5 46.0 38 CGTATAG 20 6.312554E-4 46.0 36 GATCGAT 20 6.312554E-4 46.0 14 CCTAGTA 60 0.0 46.0 31 GCGAATA 20 6.312554E-4 46.0 16 ACGTTAG 50 1.6370905E-11 46.0 33 CTATCCT 20 6.312554E-4 46.0 31 TTAGCAC 40 5.6152203E-9 46.0 19 GCAACTA 20 6.312554E-4 46.0 13 CGGTTTA 25 3.4180463E-5 46.0 19 >>END_MODULE