SRR1527967_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1527967_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1941181
Sequences flagged as poor quality	0
Sequence length	59
%GC	59

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGACCTCGCAGGGGGGCGTAACCCGAGGCCACCGAAAACCCGAGATGCAGACGGCGAGA	2473	0.12739667243806735	No Hit
TGATCTCGCAGGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCCCCTGTC	2433	0.12533607118553086	No Hit
CCTACTCGCAGGGGGACTGTAGCGGTGAAGGGCCGGAGGGGGCTCTGCGTTCTGGAGTG	2186	0.11261185845111817	No Hit
ATGCCTCGCAGGGGGTAACCGCTGGAGGCTTCTGCTGACGGCGTCGGACCTGCGGAGCC	2174	0.11199367807535722	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACGTTA	60	0.0	53.000004	32
AACGTAT	30	7.0130045E-7	53.000004	47
GATACGC	15	0.0066969576	53.000004	34
ACACGAT	15	0.0066969576	53.000004	19
ATTAGTA	75	0.0	53.000004	24
GTCGATA	45	7.6397555E-11	53.000004	50
CTCAATA	45	7.6397555E-11	53.000004	16
CGTATCT	30	7.0130045E-7	53.000004	31
GTATTCG	30	7.0130045E-7	53.000004	33
ACGTTAG	60	0.0	53.000004	33
CGCATTG	90	0.0	53.000004	46
TTATGCG	30	7.0130045E-7	53.000004	37
CGCATAT	15	0.0066969576	53.000004	39
CCAATTG	15	0.0066969576	53.000004	17
CGACCTA	75	0.0	53.000004	45
CGATTTA	15	0.0066969576	53.000004	38
CACGATA	15	0.0066969576	53.000004	31
TAACGTT	15	0.0066969576	53.000004	32
CAATTAG	15	0.0066969576	53.000004	36
TAACGTA	15	0.0066969576	53.000004	36