##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527967_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1941181 Sequences flagged as poor quality 0 Sequence length 59 %GC 59 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.51172971505491 31.0 31.0 34.0 30.0 34.0 2 31.96286745027898 31.0 31.0 34.0 30.0 34.0 3 32.0726006487803 33.0 31.0 34.0 30.0 34.0 4 35.84924795781537 37.0 35.0 37.0 35.0 37.0 5 35.80750275219055 37.0 35.0 37.0 35.0 37.0 6 35.86376437848918 37.0 35.0 37.0 35.0 37.0 7 35.76053186178929 37.0 35.0 37.0 33.0 37.0 8 35.4775391887722 37.0 35.0 37.0 32.0 37.0 9 36.95503201401621 39.0 37.0 39.0 32.0 39.0 10 36.79777310822639 39.0 37.0 39.0 32.0 39.0 11 37.37585675936453 39.0 37.0 39.0 35.0 39.0 12 37.64603352289148 39.0 37.0 39.0 35.0 39.0 13 37.75800298890211 39.0 37.0 39.0 35.0 39.0 14 38.21292398802585 40.0 38.0 40.0 35.0 40.0 15 37.455954390651875 40.0 37.0 40.0 32.0 40.0 16 36.789283946216244 39.0 35.0 40.0 31.0 40.0 17 36.61633201643742 39.0 35.0 40.0 31.0 40.0 18 36.601904716767784 39.0 35.0 40.0 30.0 40.0 19 36.81593833856812 39.0 35.0 40.0 31.0 40.0 20 37.020853799825986 39.0 36.0 40.0 31.0 40.0 21 37.01175985134822 39.0 36.0 40.0 31.0 40.0 22 36.9749487554226 39.0 35.0 40.0 31.0 40.0 23 36.91117572240816 39.0 35.0 40.0 31.0 40.0 24 36.88873268386616 39.0 35.0 40.0 31.0 40.0 25 36.74508044329715 39.0 35.0 40.0 31.0 40.0 26 36.55107895657334 39.0 35.0 40.0 30.0 40.0 27 36.441585302967624 39.0 35.0 40.0 30.0 40.0 28 36.4182392059267 39.0 35.0 40.0 30.0 40.0 29 36.4039777846579 39.0 35.0 40.0 30.0 40.0 30 36.32693190382556 39.0 35.0 40.0 30.0 40.0 31 36.32503048401978 39.0 35.0 40.0 30.0 40.0 32 36.163596800092314 39.0 35.0 40.0 30.0 40.0 33 36.0453332275558 38.0 35.0 40.0 30.0 40.0 34 35.952682413438005 38.0 35.0 40.0 30.0 40.0 35 35.8185182113363 38.0 35.0 40.0 29.0 40.0 36 35.602194231243764 38.0 34.0 40.0 28.0 40.0 37 35.44207366546448 38.0 34.0 40.0 28.0 40.0 38 35.20582264095929 38.0 34.0 40.0 27.0 40.0 39 35.04887694655985 37.0 34.0 40.0 27.0 40.0 40 34.868761851676894 37.0 33.0 40.0 26.0 40.0 41 34.69126681128653 37.0 33.0 40.0 26.0 40.0 42 34.568571915756436 36.0 33.0 40.0 26.0 40.0 43 34.3043848049203 36.0 33.0 39.0 26.0 40.0 44 34.16835730413599 36.0 33.0 39.0 25.0 40.0 45 33.95011490427734 35.0 33.0 39.0 24.0 40.0 46 33.7008790009793 35.0 33.0 39.0 24.0 40.0 47 33.54758057079685 35.0 33.0 39.0 23.0 40.0 48 33.34262801871644 35.0 32.0 38.0 23.0 40.0 49 33.24398909735877 35.0 32.0 38.0 24.0 40.0 50 33.013327453751096 35.0 32.0 38.0 23.0 40.0 51 32.831753453181335 35.0 32.0 37.0 23.0 40.0 52 32.61281972160247 35.0 31.0 37.0 23.0 40.0 53 32.33415997786914 35.0 31.0 37.0 22.0 39.0 54 32.18255484676596 35.0 31.0 36.0 22.0 39.0 55 32.058058470590844 34.0 31.0 36.0 22.0 39.0 56 31.870139878764526 34.0 31.0 36.0 21.0 39.0 57 31.74014015179419 34.0 31.0 35.0 21.0 39.0 58 31.580512584864575 34.0 31.0 35.0 20.0 38.0 59 31.122568683703374 34.0 30.0 35.0 20.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 4.0 13 11.0 14 25.0 15 55.0 16 252.0 17 648.0 18 1341.0 19 2542.0 20 4211.0 21 6273.0 22 8790.0 23 11777.0 24 16269.0 25 20773.0 26 26145.0 27 32742.0 28 39916.0 29 47998.0 30 57115.0 31 69009.0 32 83347.0 33 105902.0 34 149766.0 35 205846.0 36 258973.0 37 365084.0 38 359691.0 39 66676.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.7478478307793 19.451303098474586 30.81557052124454 16.98527854950157 2 35.12681197683266 19.915865650858937 27.857834998385005 17.0994873739234 3 25.854312400543794 20.55357022348766 32.58366942598346 21.008447949985086 4 25.4733072289498 18.70407756927355 35.85121634716186 19.971398854614794 5 0.0 0.0 0.0 100.0 6 0.0 0.0 100.0 0.0 7 0.0 0.0 0.0 100.0 8 100.0 0.0 0.0 0.0 9 0.0 0.0 0.0 100.0 10 0.0 100.0 0.0 0.0 11 99.49669814406796 0.4499322834913385 0.03317568016583719 0.02019389227485742 12 99.56114344824104 0.28791751001065846 0.10493611878541981 0.046002922962876724 13 98.86182689816148 0.7420225110383833 0.16938142295849792 0.2267691678416387 14 68.92443311571667 21.56414059276286 3.5168281577039955 5.994598133816476 15 34.67620999793425 29.720773075771916 15.541209191724006 20.061807734569832 16 32.245267185285655 16.0839200466108 26.248711480279276 25.422101287824265 17 23.026085666406175 18.109181987666272 29.16229862130322 29.70243372462434 18 23.17975500481408 19.293976192843427 30.40247148514229 27.1237973172002 19 24.701818120000144 20.240770953352623 27.667486957681948 27.389923968965284 20 28.144310087518885 17.940830865334043 26.605607617218592 27.309251429928484 21 30.49504399641249 19.068494900784625 22.49125661131033 27.945204491492547 22 28.66342705806414 20.295995066920604 22.30776006977196 28.732817805243304 23 29.17048951128205 19.157152269675006 23.36680608351308 28.305552135529865 24 29.980717923779387 20.381046383619044 22.26505410881314 27.373181583788426 25 31.060833585327696 18.074666916686287 24.03722270102582 26.827276796960202 26 29.255798403137057 19.571899786779284 23.280569921094425 27.89173188898923 27 30.75514338951391 21.372607706339593 20.828763520763907 27.043485383382592 28 29.637164179950247 22.065639422598924 19.84796883958786 28.449227557862972 29 29.33219519457485 20.60292162348591 21.74459774745374 28.320285434485506 30 29.393910202088314 21.423040921995423 21.459152958946127 27.723895916970132 31 28.998120216507374 19.602036080097633 22.23728750693521 29.162556196459782 32 30.01317239350684 19.39504868428034 22.164136162470164 28.42764275974265 33 28.477663855147973 21.619467736393464 21.611688966665138 28.291179441793425 34 27.346290737442825 21.41211973535698 24.064268092465362 27.177321434734836 35 30.97181561121812 21.491916518861455 19.58812702164301 27.948140848277415 36 31.588759626227535 21.80600366477933 21.124974950816025 25.480261758177107 37 30.774049406005933 22.798595288126148 21.991663837632863 24.43569146823506 38 30.388407881593732 23.273151756585296 21.897082240141437 24.441358121679535 39 30.518483335660097 22.934852545950122 24.04618631647435 22.50047780191543 40 30.4735622283548 23.469578570983334 21.430613631598497 24.626245569063368 41 29.677088329218144 24.11985281125253 20.61337917484253 25.589679684686793 42 30.567628675533093 22.94979190503101 20.332725284247065 26.14985413518884 43 30.607810399957554 22.2287875267685 20.499788530796458 26.663613542477492 44 30.85327952416596 21.87884591905649 19.817162850862438 27.45071170591511 45 28.052304241593134 21.795855203610586 21.26143826876525 28.89040228603103 46 28.715199664534115 22.28262073449101 21.523031597774754 27.479148003200116 47 28.80797823592957 20.529049068582474 24.34538561834265 26.317587077145305 48 28.875102321730946 19.84271430639389 22.953397957222947 28.328785414652213 49 29.148544107942538 20.479027973177153 22.620868430094877 27.75155948878544 50 28.09392838689437 21.610710181070182 22.36968113741068 27.925680294624765 51 28.03885881842033 22.35396905286009 22.545244364126788 27.06192776459279 52 29.85265155593425 21.85870354181295 21.786221892754977 26.50242300949783 53 27.68345661738911 24.09929831375848 21.91655492197791 26.300690146874505 54 26.545953210957656 23.371957586644417 23.308903188316805 26.77318601408112 55 26.892803916790857 22.619374494186786 22.84985274428299 27.637968844739362 56 27.845007755587964 23.800871737359884 21.75577650924875 26.598343997803397 57 28.168522152236193 23.869747334225917 21.480119576690683 26.481610936847204 58 28.08383144075694 22.87344662862453 21.182671785887045 27.86005014473148 59 27.11426703640722 21.643782831173393 24.046237831505664 27.195712300913723 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 3.5 9 12.5 10 18.0 11 28.5 12 39.0 13 67.0 14 171.5 15 248.0 16 320.0 17 392.0 18 453.0 19 596.5 20 679.0 21 737.0 22 795.0 23 996.0 24 1197.0 25 1941.5 26 3068.0 27 3450.0 28 3750.5 29 4051.0 30 5968.5 31 7907.5 32 7929.0 33 9778.0 34 11627.0 35 12814.5 36 15611.5 37 17221.0 38 18683.5 39 20146.0 40 21445.5 41 22745.0 42 26951.0 43 32116.5 44 33076.0 45 35516.0 46 37956.0 47 39155.5 48 44097.5 49 47840.0 50 55438.5 51 63037.0 52 71063.5 53 85758.5 54 92427.0 55 99836.5 56 107246.0 57 115867.5 58 140687.5 59 156886.0 60 168266.5 61 179647.0 62 176568.5 63 173490.0 64 164197.0 65 138864.0 66 122824.0 67 116254.5 68 109685.0 69 99947.0 70 75499.0 71 60789.0 72 55061.0 73 49333.0 74 39646.0 75 24115.0 76 18271.0 77 15048.0 78 11825.0 79 8774.5 80 5724.0 81 4229.5 82 2279.5 83 1824.0 84 1056.0 85 288.0 86 242.5 87 150.5 88 104.0 89 91.0 90 78.0 91 43.0 92 4.5 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 1941181.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.717528088698973 #Duplication Level Percentage of deduplicated Percentage of total 1 81.0519769484767 9.497288165383573 2 7.18704062469024 1.6842870078885699 3 3.0475597970442214 1.0712960257156618 4 1.776780434613789 0.8327789860015138 5 1.073163319854072 0.6287410672075764 6 0.6941600960735697 0.4880304254277618 7 0.44493091377665517 0.364944333579592 8 0.32549451567155085 0.3051192904079092 9 0.22628824997602423 0.23863850327129382 >10 1.5548835362241311 3.788753312949438 >50 0.48375247997554194 4.148905827169926 >100 1.861940846478477 54.11181025796482 >500 0.2451775535433834 18.764721202175007 >1k 0.026850683601699076 4.074685594857352 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGACCTCGCAGGGGGGCGTAACCCGAGGCCACCGAAAACCCGAGATGCAGACGGCGAGA 2473 0.12739667243806735 No Hit TGATCTCGCAGGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCCCCTGTC 2433 0.12533607118553086 No Hit CCTACTCGCAGGGGGACTGTAGCGGTGAAGGGCCGGAGGGGGCTCTGCGTTCTGGAGTG 2186 0.11261185845111817 No Hit ATGCCTCGCAGGGGGTAACCGCTGGAGGCTTCTGCTGACGGCGTCGGACCTGCGGAGCC 2174 0.11199367807535722 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.020812072650618362 0.0 0.0 0.0 0.0 11 0.02127570793243907 0.0 0.0 0.0 0.0 12 0.0223060085587073 0.0 0.0 0.0 0.0 13 0.023748429435482832 0.0 0.0 0.0 0.0 14 0.03065144363148001 0.0 0.0 0.0 0.0 15 0.0428605060527586 0.0 0.0 0.0 0.0 16 0.05136048621947155 0.0 0.0 0.0 0.0 17 0.058727135697289434 0.0 0.0 0.0 0.0 18 0.06784529623976332 0.0 0.0 0.0 0.0 19 0.07850890772163956 0.0 0.0 0.0 0.0 20 0.08906948914088897 0.0 0.0 0.0 0.0 21 0.1013815816247944 0.0 0.0 0.0 0.0 22 0.11256034341980475 0.0 0.0 0.0 0.0 23 0.12332698496430781 0.0 0.0 0.0 0.0 24 0.13445423172800475 0.0 0.0 0.0 0.0 25 0.14753904968161136 0.0 0.0 0.0 0.0 26 0.1656723407039323 0.0 0.0 0.0 0.0 27 0.1815389703484631 0.0 0.0 0.0 0.0 28 0.19730256993036713 0.0 0.0 0.0 0.0 29 0.21517828579612103 0.0 0.0 0.0 0.0 30 0.23799944466796244 0.0 0.0 0.0 0.0 31 0.2592236375690881 0.0 0.0 0.0 0.0 32 0.2746266319317982 0.0 0.0 0.0 0.0 33 0.288484175355106 0.0 0.0 0.0 0.0 34 0.30141444821477237 0.0 0.0 0.0 0.0 35 0.3137265406986778 0.0 0.0 0.0 0.0 36 0.32753256909067213 0.0 0.0 0.0 0.0 37 0.34061738704427874 0.0 0.0 0.0 0.0 38 0.3566385617827498 0.0 0.0 0.0 0.0 39 0.3733809469596086 0.0 0.0 0.0 0.0 40 0.39362635426577947 0.0 0.0 0.0 0.0 41 0.40980207409819075 0.0 0.0 0.0 0.0 42 0.42546264361746794 0.0 0.0 0.0 0.0 43 0.4388050367276416 0.0 0.0 0.0 0.0 44 0.45173530958730795 0.0 0.0 0.0 0.0 45 0.46461406741566086 0.0 0.0 0.0 0.0 46 0.4796049415278637 0.0 0.0 0.0 0.0 47 0.4918655189804557 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTA 60 0.0 53.000004 32 AACGTAT 30 7.0130045E-7 53.000004 47 GATACGC 15 0.0066969576 53.000004 34 ACACGAT 15 0.0066969576 53.000004 19 ATTAGTA 75 0.0 53.000004 24 GTCGATA 45 7.6397555E-11 53.000004 50 CTCAATA 45 7.6397555E-11 53.000004 16 CGTATCT 30 7.0130045E-7 53.000004 31 GTATTCG 30 7.0130045E-7 53.000004 33 ACGTTAG 60 0.0 53.000004 33 CGCATTG 90 0.0 53.000004 46 TTATGCG 30 7.0130045E-7 53.000004 37 CGCATAT 15 0.0066969576 53.000004 39 CCAATTG 15 0.0066969576 53.000004 17 CGACCTA 75 0.0 53.000004 45 CGATTTA 15 0.0066969576 53.000004 38 CACGATA 15 0.0066969576 53.000004 31 TAACGTT 15 0.0066969576 53.000004 32 CAATTAG 15 0.0066969576 53.000004 36 TAACGTA 15 0.0066969576 53.000004 36 >>END_MODULE