SRR1527966_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1527966_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2036267
Sequences flagged as poor quality	0
Sequence length	52
%GC	57

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCAAGGACTGGGGACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCCC	3752	0.18425874406450626	No Hit
GAACAGGACTGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCC	3701	0.1817541609229045	No Hit
ACAAAGGACTGGGGGACACAGGATCTGGAGCTGTGCTGATAACAGCGGAATC	3636	0.17856204515419638	No Hit
GGGCAGGACTGGGGAAGGAAAGAAAGAAAGAAAGAAAGGAAGTGAAAGAAAG	3272	0.16068619684943083	No Hit
GCTCAGGACTGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCC	2672	0.13122051283058656	No Hit
CCTGAGGACTGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCC	2282	0.11206781821833778	No Hit
TAATAGGACTGGGGATGTGGATTGTCTCAAAGCCTGCCAGGAGCAAATCGAA	2273	0.11162583295805512	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTTAA	75	0.0	46.000004	45
ACAGTCG	35	1.02008926E-7	46.000004	30
CGAACAA	35	1.02008926E-7	46.000004	29
CGTATAG	70	0.0	46.000004	25
CCGATCA	35	1.02008926E-7	46.000004	37
CTATATG	35	1.02008926E-7	46.000004	15
ATAATCG	70	0.0	46.000004	42
CACGATT	35	1.02008926E-7	46.000004	24
TAAGTCG	35	1.02008926E-7	46.000004	28
TAAGTCC	35	1.02008926E-7	46.000004	22
ATGTAAT	70	0.0	46.000004	25
ACGATTG	35	1.02008926E-7	46.000004	25
ACGATAT	35	1.02008926E-7	46.000004	45
ATCCCGT	35	1.02008926E-7	46.000004	40
CGAATAA	75	0.0	46.000004	15
TCGTACC	35	1.02008926E-7	46.000004	45
CGTAATC	75	0.0	46.000004	28
TATAGAC	35	1.02008926E-7	46.000004	22
CAATGCG	35	1.02008926E-7	46.000004	42
CGCGTAT	70	0.0	46.000004	23