SRR1527965_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1527965_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2020132
Sequences flagged as poor quality	0
Sequence length	52
%GC	57

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCAAGGACTGGGGACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCCC	3561	0.17627560971263265	No Hit
GAACAGGACTGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCC	3502	0.17335500848459406	No Hit
ACAAAGGACTGGGGGACACAGGATCTGGAGCTGTGCTGATAACAGCGGAATC	3497	0.17310749990594673	No Hit
GGGCAGGACTGGGGAAGGAAAGAAAGAAAGAAAGAAAGGAAGTGAAAGAAAG	3001	0.14855464890413103	No Hit
GCTCAGGACTGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCC	2588	0.1281104403078611	No Hit
TAATAGGACTGGGGATGTGGATTGTCTCAAAGCCTGCCAGGAGCAAATCGAA	2179	0.10786423857450898	No Hit
CCTGAGGACTGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCC	2168	0.10731971970148485	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGTACT	35	1.02008926E-7	46.000004	23
TTTAACG	35	1.02008926E-7	46.000004	16
CCAATTA	35	1.02008926E-7	46.000004	31
CGACCAA	35	1.02008926E-7	46.000004	33
TCGGATT	35	1.02008926E-7	46.000004	31
TACGCGG	35	1.02008926E-7	46.000004	35
CGCTCAT	35	1.02008926E-7	46.000004	43
TACGATT	35	1.02008926E-7	46.000004	31
TTAAGCG	35	1.02008926E-7	46.000004	29
GTATAAT	35	1.02008926E-7	46.000004	27
ATAACGG	35	1.02008926E-7	46.000004	32
TGTACGC	35	1.02008926E-7	46.000004	22
TCGACAA	35	1.02008926E-7	46.000004	17
CTAATGG	35	1.02008926E-7	46.000004	43
GTACGGG	35	1.02008926E-7	46.000004	42
GTTGCGT	35	1.02008926E-7	46.000004	46
CTTAAGT	30	1.8621085E-6	46.0	34
ACAACGA	30	1.8621085E-6	46.0	14
AACGTTG	55	1.8189894E-12	46.0	20
CTGCTAT	25	3.4180823E-5	46.0	19