##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527965_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2020132 Sequences flagged as poor quality 0 Sequence length 52 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.74013579310659 31.0 31.0 34.0 30.0 34.0 2 32.202916443083915 34.0 31.0 34.0 30.0 34.0 3 32.43457160225174 34.0 31.0 34.0 30.0 34.0 4 36.01975316464468 37.0 35.0 37.0 35.0 37.0 5 36.011784378446556 37.0 35.0 37.0 35.0 37.0 6 35.9845381390919 37.0 35.0 37.0 35.0 37.0 7 35.72005146198367 37.0 35.0 37.0 33.0 37.0 8 35.701575936621964 37.0 35.0 37.0 33.0 37.0 9 37.71967277385834 39.0 38.0 39.0 35.0 39.0 10 37.9371174754917 39.0 38.0 39.0 35.0 39.0 11 38.14608401827207 39.0 39.0 39.0 37.0 39.0 12 38.15045353471951 39.0 39.0 39.0 37.0 39.0 13 38.16096819415761 39.0 39.0 39.0 37.0 39.0 14 38.83411331536751 40.0 39.0 40.0 36.0 40.0 15 38.187603087323005 40.0 38.0 40.0 34.0 40.0 16 37.61661267679538 40.0 37.0 40.0 33.0 40.0 17 37.60885130278616 40.0 37.0 40.0 33.0 40.0 18 37.66155577952332 40.0 37.0 40.0 33.0 40.0 19 37.81780200501749 40.0 37.0 40.0 33.0 40.0 20 37.822145780572754 40.0 37.0 40.0 33.0 40.0 21 37.85302396081048 40.0 37.0 40.0 34.0 40.0 22 37.80633641762024 40.0 37.0 40.0 33.0 40.0 23 37.69427393853471 40.0 37.0 40.0 33.0 40.0 24 37.69626440252419 40.0 37.0 40.0 33.0 40.0 25 37.6417531131629 40.0 37.0 40.0 33.0 40.0 26 37.599978120241644 40.0 37.0 40.0 33.0 40.0 27 37.581693176485494 40.0 37.0 40.0 33.0 40.0 28 37.4107399912481 40.0 37.0 40.0 33.0 40.0 29 37.508053929149185 40.0 37.0 40.0 33.0 40.0 30 37.54670041363634 40.0 37.0 40.0 33.0 40.0 31 37.526021071890355 40.0 37.0 40.0 33.0 40.0 32 37.443972968103076 40.0 36.0 40.0 33.0 40.0 33 37.378490118467504 40.0 36.0 40.0 33.0 40.0 34 37.292797698368226 40.0 36.0 40.0 33.0 40.0 35 37.12638679056616 40.0 35.0 40.0 33.0 40.0 36 36.65029364417771 39.0 35.0 40.0 31.0 40.0 37 36.733768882429466 39.0 35.0 40.0 31.0 40.0 38 36.66202258070265 39.0 35.0 40.0 31.0 40.0 39 36.543769417048 39.0 35.0 40.0 31.0 40.0 40 36.4284957616631 39.0 35.0 40.0 31.0 40.0 41 36.240319939489105 38.0 35.0 40.0 31.0 40.0 42 35.94138254331895 38.0 35.0 40.0 30.0 40.0 43 35.741601538909336 38.0 35.0 40.0 30.0 40.0 44 35.57502331530811 38.0 35.0 40.0 29.0 40.0 45 35.15603782327096 37.0 34.0 40.0 28.0 40.0 46 35.140383895705824 37.0 34.0 40.0 28.0 40.0 47 35.013518918565715 37.0 34.0 40.0 28.0 40.0 48 34.83504691772617 36.0 34.0 40.0 28.0 40.0 49 34.6896385978738 36.0 34.0 40.0 27.0 40.0 50 34.446331229840425 35.0 34.0 39.0 27.0 40.0 51 34.35298534947221 35.0 34.0 39.0 27.0 40.0 52 33.856836582955964 35.0 33.0 39.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 3.0 14 6.0 15 16.0 16 35.0 17 96.0 18 276.0 19 642.0 20 1149.0 21 1982.0 22 3060.0 23 4527.0 24 6548.0 25 9362.0 26 12940.0 27 17260.0 28 22926.0 29 30272.0 30 38217.0 31 46934.0 32 56866.0 33 72057.0 34 102729.0 35 173491.0 36 189014.0 37 359810.0 38 583770.0 39 286143.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.051915419388436 22.488134438739646 33.953771337714564 11.506178804157353 2 27.12085150871329 21.230345343769617 34.2461284708128 17.402674676704294 3 19.071377513944636 22.370369857019245 36.44355913375958 22.114693495276548 4 20.36663940772187 24.657547130583545 32.84874453748567 22.127068924208913 5 0.0 100.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 100.0 0.0 0.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 0.0 100.0 10 0.0 0.0 100.0 0.0 11 99.4943399738235 0.37992566822366064 0.09083564836357229 0.034898709589274365 12 99.36429896660218 0.41784398247243254 0.11642803539570683 0.10142901552967826 13 98.00201174972725 1.039536030318811 0.4262097724307124 0.5322424475232312 14 64.50543825849005 22.266218247124446 5.077093972077072 8.151249522308444 15 33.875806135440655 26.565838271954505 17.225854548118637 22.332501044486204 16 27.9124334449432 18.770258577162284 28.015298010229035 25.30200996766548 17 22.859595313573568 17.274217724386325 29.92764829228981 29.938538669750294 18 24.089217932293533 19.375268546807835 31.14380644433136 25.391707076567272 19 25.72059647587385 18.564925460316452 28.98964028093214 26.724837782877554 20 28.474970942492867 18.798722063706727 25.313494365714718 27.412812628085693 21 30.435783404252792 18.68145249914362 20.308969908897044 30.573794187706543 22 30.289901847998053 20.167395001910766 21.78728914744185 27.75541400264933 23 30.000564319559313 19.511150756485222 21.373207295364857 29.11507762859061 24 29.720731120540638 21.00229093940396 20.933978571697295 28.342999368358107 25 32.15977965796294 19.289927588890233 22.043411024626113 26.50688172852071 26 32.197994982506096 18.52002740414983 20.84235089588205 28.43962671746203 27 29.866117659638082 22.000691043951583 20.627117435890327 27.506073860520008 28 31.338793702589733 20.028245678995233 20.094082960915426 28.53887765749961 29 30.007247051182794 20.431635160474663 20.920266596440232 28.64085119190231 30 31.127817390150742 19.282304324667894 20.60469315866488 28.985185126516484 31 31.08445388717173 19.064546277173967 20.39064773985066 29.46035209580364 32 32.004938291161174 20.949621113867806 19.215279001570195 27.830161593400828 33 30.81684761193823 21.828722083507415 19.82316007072805 27.531270233826305 34 30.127585722121133 22.061726659446016 20.705429150174346 27.10525846825851 35 31.806386909370275 22.920482423920813 19.228297952807043 26.044832713901865 36 32.49441125629414 23.226304023697462 19.191072662578485 25.08821205742991 37 31.750796482606088 22.38739844723018 19.062665211976245 26.799139858187488 38 30.83635128793564 23.71250987559229 21.075998994125136 24.375139842346936 39 30.810065876883293 23.8758160357838 22.308146200347302 23.005971886985602 40 31.367455195997096 23.74493349939509 20.144376704096565 24.743234600511254 41 31.37280138129588 24.730166147558673 19.11721610271012 24.77981636843533 42 33.74170598752953 22.8463783554738 17.728940485077214 25.68297517191946 43 32.15077034570018 23.798197345519995 18.572697229685982 25.47833507909384 44 31.802377270396192 24.921787289147442 18.499583195553555 24.776252244902807 45 29.483964414206596 22.53219096573887 20.60177255743684 27.38207206261769 46 30.38133151695038 20.662709169499816 21.157577821647298 27.798381491902507 47 30.194314034924453 20.91561343516166 22.453532739444746 26.436539790469137 48 28.95800868458101 21.114263820384014 23.297487490916435 26.630240004118544 49 30.03858163723955 20.680331780299504 22.023214324608492 27.257872257852455 50 30.34856138113747 21.865501858294408 21.008033138428576 26.777903622139544 51 28.911031556353745 22.067270851607717 21.595767009284543 27.425930582754 52 29.48530096053129 22.109198804830577 21.569085584506357 26.836414650131772 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 1.5 8 3.0 9 11.5 10 20.0 11 83.0 12 146.0 13 242.5 14 477.5 15 616.0 16 845.5 17 1075.0 18 1228.0 19 1381.0 20 1662.5 21 1944.0 22 2379.0 23 2814.0 24 3964.5 25 5115.0 26 7327.0 27 9539.0 28 10755.5 29 11972.0 30 12762.0 31 13552.0 32 13812.5 33 14073.0 34 14609.5 35 15146.0 36 16011.0 37 16876.0 38 18712.0 39 21422.5 40 22297.0 41 25883.0 42 29469.0 43 37424.0 44 45379.0 45 45618.0 46 45857.0 47 55279.5 48 64702.0 49 70498.5 50 76295.0 51 88031.5 52 99768.0 53 111558.5 54 123349.0 55 133740.0 56 144131.0 57 162046.5 58 179962.0 59 187348.5 60 194735.0 61 195443.5 62 196152.0 63 185355.5 64 155596.0 65 136633.0 66 125778.0 67 114923.0 68 100551.5 69 86180.0 70 77964.5 71 69749.0 72 59237.5 73 48726.0 74 38873.0 75 29020.0 76 21493.0 77 13966.0 78 9569.5 79 5173.0 80 3948.0 81 2723.0 82 1937.5 83 1152.0 84 600.5 85 49.0 86 30.0 87 11.0 88 10.5 89 6.5 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2020132.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.871193999452274 #Duplication Level Percentage of deduplicated Percentage of total 1 76.53145961400706 7.554568849111106 2 8.054260772943476 1.5901034122380697 3 3.6486604853655713 1.0804990646753772 4 2.1594939907334116 0.8526713649272359 5 1.386313077634079 0.6842282666651868 6 0.8559481643118417 0.5069538230038344 7 0.6123326639099054 0.42311181623592586 8 0.4588161773137098 0.36232507970805783 9 0.3479532207168989 0.30912423699876707 >10 2.3819288437856194 4.703769632303066 >50 0.6725545152425226 4.990770729742246 >100 2.658683990693403 60.73133479381821 >500 0.21556897221838406 13.649070580742315 >1k 0.016025511124148455 2.5614683498306055 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCCAAGGACTGGGGACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCCC 3561 0.17627560971263265 No Hit GAACAGGACTGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCC 3502 0.17335500848459406 No Hit ACAAAGGACTGGGGGACACAGGATCTGGAGCTGTGCTGATAACAGCGGAATC 3497 0.17310749990594673 No Hit GGGCAGGACTGGGGAAGGAAAGAAAGAAAGAAAGAAAGGAAGTGAAAGAAAG 3001 0.14855464890413103 No Hit GCTCAGGACTGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCC 2588 0.1281104403078611 No Hit TAATAGGACTGGGGATGTGGATTGTCTCAAAGCCTGCCAGGAGCAAATCGAA 2179 0.10786423857450898 No Hit CCTGAGGACTGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCC 2168 0.10731971970148485 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0027720960808501624 0.0 0.0 0.0 0.0 12 0.006534226476289668 0.0 0.0 0.0 0.0 13 0.009207319125680897 0.0 0.0 0.0 0.0 14 0.03856183655325494 0.0 0.0 0.0 0.0 15 0.070143931188655 0.0 0.0 0.0 0.0 16 0.08638049394792023 0.0 0.0 0.0 0.0 17 0.10133001209821932 0.0 0.0 0.0 0.0 18 0.12004166064395792 0.0 0.0 0.0 0.0 19 0.13474367021560968 0.0 0.0 0.0 0.0 20 0.1548908685175028 0.0 0.0 0.0 0.0 21 0.1744935479463718 0.0 0.0 0.0 0.0 22 0.19800686291786873 0.0 0.0 0.0 0.0 23 0.2187480818085155 0.0 0.0 0.0 0.0 24 0.24216239334855347 0.0 0.0 0.0 0.0 25 0.26483417915264945 0.0 0.0 0.0 0.0 26 0.2965647789352379 0.0 0.0 0.0 0.0 27 0.3283943821492853 0.0 0.0 0.0 0.0 28 0.3593329544802023 0.0 0.0 0.0 0.0 29 0.3930436228919694 0.0 0.0 0.0 0.0 30 0.4372486550383836 0.0 0.0 0.0 0.0 31 0.47808757051519407 0.0 0.0 0.0 0.0 32 0.5170949225100142 0.0 0.0 0.0 0.0 33 0.5455584090544578 0.0 0.0 0.0 0.0 34 0.5732793698629595 0.0 0.0 0.0 0.0 35 0.599713286062495 0.0 0.0 0.0 0.0 36 0.625157167947441 0.0 0.0 0.0 0.0 37 0.6503535412537399 0.0 0.0 0.0 0.0 38 0.6763419420117102 0.0 0.0 0.0 0.0 39 0.7040629028202118 0.0 0.0 0.0 0.0 40 0.7359420077499886 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGTACT 35 1.02008926E-7 46.000004 23 TTTAACG 35 1.02008926E-7 46.000004 16 CCAATTA 35 1.02008926E-7 46.000004 31 CGACCAA 35 1.02008926E-7 46.000004 33 TCGGATT 35 1.02008926E-7 46.000004 31 TACGCGG 35 1.02008926E-7 46.000004 35 CGCTCAT 35 1.02008926E-7 46.000004 43 TACGATT 35 1.02008926E-7 46.000004 31 TTAAGCG 35 1.02008926E-7 46.000004 29 GTATAAT 35 1.02008926E-7 46.000004 27 ATAACGG 35 1.02008926E-7 46.000004 32 TGTACGC 35 1.02008926E-7 46.000004 22 TCGACAA 35 1.02008926E-7 46.000004 17 CTAATGG 35 1.02008926E-7 46.000004 43 GTACGGG 35 1.02008926E-7 46.000004 42 GTTGCGT 35 1.02008926E-7 46.000004 46 CTTAAGT 30 1.8621085E-6 46.0 34 ACAACGA 30 1.8621085E-6 46.0 14 AACGTTG 55 1.8189894E-12 46.0 20 CTGCTAT 25 3.4180823E-5 46.0 19 >>END_MODULE