SRR1527964_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1527964_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2033804
Sequences flagged as poor quality	0
Sequence length	59
%GC	57

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAACAGGACTGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCCCCTGTCT	3875	0.19052966755891915	No Hit
GCCAAGGACTGGGGACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCCCCTGTCTA	3776	0.1856619418587042	No Hit
ACAAAGGACTGGGGGACACAGGATCTGGAGCTGTGCTGATAACAGCGGAATCCCCTGTC	3746	0.18418687346469964	No Hit
GGGCAGGACTGGGGAAGGAAAGAAAGAAAGAAAGAAAGGAAGTGAAAGAAAGAAAGAAA	3537	0.1739105636531347	No Hit
GCTCAGGACTGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCCCCTGTCT	2674	0.13147776285227092	No Hit
CCTGAGGACTGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCCCCTGTCT	2256	0.11092514322914107	No Hit
TTATAGGACTGGGGGACAACCAATGACCTTGACACTGCCTCTTAGGCACTTAGCTCTAG	2087	0.10261559127624884	No Hit
TAATAGGACTGGGGATGTGGATTGTCTCAAAGCCTGCCAGGAGCAAATCGAAGCTCTGC	2075	0.10202556391864703	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACGTTG	50	3.6379788E-12	53.0	20
AGGTATA	15	0.0066970037	53.0	30
TGATACG	20	3.13882E-4	53.0	45
GATACGC	25	1.4791383E-5	53.0	48
TCGTTAA	55	0.0	53.0	45
CGAACAA	25	1.4791383E-5	53.0	29
CGTATTA	20	3.13882E-4	53.0	51
TTAATCG	15	0.0066970037	53.0	24
GTATTAG	20	3.13882E-4	53.0	52
CGTATAG	70	0.0	53.0	25
CGTATAC	25	1.4791383E-5	53.0	42
CGACGTT	15	0.0066970037	53.0	44
TTTACGG	15	0.0066970037	53.0	35
CCGATTA	35	3.3438482E-8	53.0	33
TAGACGC	20	3.13882E-4	53.0	31
TAGACCT	35	3.3438482E-8	53.0	50
CGCATTA	30	7.013168E-7	53.0	40
ATAATCG	80	0.0	53.0	42
CGTTGTA	15	0.0066970037	53.0	17
TATGGAT	25	1.4791383E-5	53.0	17